From b084e8250f714a5d67587f1d43f40d5774d25643 Mon Sep 17 00:00:00 2001
From: Donnie Berkholz <donnie@supernova.(none)>
Date: Mon, 17 Apr 2006 22:30:24 -0700
Subject: Initial commit of portage overlay.

---
 sci-biology/paml/paml-3.15.ebuild | 34 ++++++++++++++++++++++++++++++++++
 1 file changed, 34 insertions(+)
 create mode 100644 sci-biology/paml/paml-3.15.ebuild

(limited to 'sci-biology/paml/paml-3.15.ebuild')

diff --git a/sci-biology/paml/paml-3.15.ebuild b/sci-biology/paml/paml-3.15.ebuild
new file mode 100644
index 0000000..7fee096
--- /dev/null
+++ b/sci-biology/paml/paml-3.15.ebuild
@@ -0,0 +1,34 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-misc/colordiff/colordiff-1.0.5-r2.ebuild,v 1.7 2005/08/17 18:08:02 grobian Exp $
+
+inherit toolchain-funcs
+
+MY_P="${P/-}"
+DESCRIPTION="Phylogenetic Analysis by Maximum Likelihood"
+HOMEPAGE="http://abacus.gene.ucl.ac.uk/software/paml.html"
+SRC_URI="http://abacus.gene.ucl.ac.uk/software/${MY_P}.tar.gz"
+LICENSE="free-noncomm"
+SLOT="0"
+KEYWORDS="~x86"
+IUSE=""
+RDEPEND=""
+DEPEND="${RDEPEND}"
+S="${WORKDIR}/${MY_P}"
+
+src_compile() {
+	cd src
+	emake \
+		-f Makefile.UNIX \
+		CC="$(tc-getCC)" \
+		CFLAGS="${CFLAGS}" \
+		|| die "make failed"
+}
+
+src_install() {
+	exeinto /usr/bin
+	pushd ${S}/src
+	doexe baseml codeml basemlg mcmctree pamp evolver yn00 chi2
+	popd
+	dodoc README.txt doc/*
+}
-- 
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