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| author |   Jeffrey Gardner <je_fro@gentoo.org> | 2007-08-24 18:53:44 +0000 |
|---|---|---|
| committer | Jeffrey Gardner <je_fro@gentoo.org> | 2007-08-24 18:53:44 +0000 |
| commit | 1ebd2d8cdc501afb3050fa729ac366ab125512fd (patch) | |
| tree | e90287b4b33df8dce5074a8047453887ee4a1f69 /sci-chemistry/namd/files | |
| parent | Depend on no specific charm revision. (diff) | |
| download | je_fro-1ebd2d8cdc501afb3050fa729ac366ab125512fd.tar.gz je_fro-1ebd2d8cdc501afb3050fa729ac366ab125512fd.tar.bz2 je_fro-1ebd2d8cdc501afb3050fa729ac366ab125512fd.zip | |
Quick and dirty namd for amd64 only.
svn path=/; revision=59
Diffstat (limited to 'sci-chemistry/namd/files')
| -rw-r--r-- | sci-chemistry/namd/files/namd-2.6-gentoo-amd64.patch (renamed from sci-chemistry/namd/files/namd-2.6-gentoo.patch) | 40 |
1 files changed, 19 insertions, 21 deletions
diff --git a/sci-chemistry/namd/files/namd-2.6-gentoo.patch b/sci-chemistry/namd/files/namd-2.6-gentoo-amd64.patch index 9a71de8..9d65e51 100644 --- a/sci-chemistry/namd/files/namd-2.6-gentoo.patch +++ b/sci-chemistry/namd/files/namd-2.6-gentoo-amd64.patch @@ -1,6 +1,6 @@ -diff -Naur NAMD_2.6_Source/Makefile NAMD_2.6_Source.new/Makefile ---- NAMD_2.6_Source/Makefile 2006-08-30 00:19:25.000000000 -0400 -+++ NAMD_2.6_Source.new/Makefile 2006-09-19 15:56:17.000000000 -0400 +diff -aurN NAMD_2.6_Source-orig/Makefile NAMD_2.6_Source/Makefile +--- NAMD_2.6_Source-orig/Makefile 2007-08-24 13:35:35.659265380 -0500 ++++ NAMD_2.6_Source/Makefile 2007-08-24 13:42:09.933733803 -0500 @@ -232,10 +232,10 @@ $(DSTDIR)/stringhash.o @@ -11,8 +11,8 @@ diff -Naur NAMD_2.6_Source/Makefile NAMD_2.6_Source.new/Makefile -CHARMLIB = $(CHARM)/lib +CHARMC = /usr/bin/charmc +CHARMXI = /usr/bin/charmc -+CHARMINC = /usr/include/charm-5.9 $(COPTD)CMK_OPTIMIZE=1 -+CHARMLIB = /usr/lib ++CHARMINC = /usr/include/charm-9999 $(COPTD)CMK_OPTIMIZE=1 ++CHARMLIB = /usr/lib64 # Libraries we may have changed LIBS = $(PLUGINLIB) $(DPMTALIBS) $(DPMELIBS) $(TCLDLL) @@ -76,32 +76,30 @@ diff -Naur NAMD_2.6_Source/Makefile NAMD_2.6_Source.new/Makefile -for f in $(RELEASE_FILES); do echo $$f; $(LDD) $$f; done winrelease: winall -diff -Naur NAMD_2.6_Source/arch/Linux-i686.fftw NAMD_2.6_Source.new/arch/Linux-i686.fftw ---- NAMD_2.6_Source/arch/Linux-i686.fftw 2004-02-20 17:38:36.000000000 -0500 -+++ NAMD_2.6_Source.new/arch/Linux-i686.fftw 2006-09-19 15:52:32.000000000 -0400 -@@ -1,7 +1,7 @@ +diff -aurN NAMD_2.6_Source-orig/arch/Linux-amd64.fftw NAMD_2.6_Source/arch/Linux-amd64.fftw +--- NAMD_2.6_Source-orig/arch/Linux-amd64.fftw 2007-08-24 13:35:35.663265610 -0500 ++++ NAMD_2.6_Source/arch/Linux-amd64.fftw 2007-08-24 13:43:45.623186828 -0500 +@@ -1,7 +1,6 @@ --FFTDIR=/Projects/namd2/fftw/linux +-FFTDIR=/Projects/namd2/fftw/linux-amd64 -FFTINCL=-I$(FFTDIR)/include -I$(HOME)/fftw/include -FFTLIB=-L$(FFTDIR)/lib -L$(HOME)/fftw/lib -lsrfftw -lsfftw -+#FFTDIR=/Projects/namd2/fftw/linux +FFTINCL=-I/usr/include -+FFTLIB=-L/usr/lib -lsrfftw -lsfftw ++FFTLIB=-L/usr/lib64 -lsrfftw -lsfftw FFTFLAGS=-DNAMD_FFTW FFT=$(FFTINCL) $(FFTFLAGS) -diff -Naur NAMD_2.6_Source/arch/Linux-i686.tcl NAMD_2.6_Source.new/arch/Linux-i686.tcl ---- NAMD_2.6_Source/arch/Linux-i686.tcl 2004-10-27 17:40:55.000000000 -0400 -+++ NAMD_2.6_Source.new/arch/Linux-i686.tcl 2006-09-19 15:56:45.000000000 -0400 -@@ -1,8 +1,8 @@ +diff -aurN NAMD_2.6_Source-orig/arch/Linux-amd64.tcl NAMD_2.6_Source/arch/Linux-amd64.tcl +--- NAMD_2.6_Source-orig/arch/Linux-amd64.tcl 2007-08-24 13:35:35.663265610 -0500 ++++ NAMD_2.6_Source/arch/Linux-amd64.tcl 2007-08-24 13:46:44.921404457 -0500 +@@ -1,7 +1,6 @@ --TCLDIR=/Projects/namd2/tcl/linux -+#TCLDIR=/Projects/namd2/tcl/linux - #TCLDIR=$(HOME)/tcl/cray-xt3 +-TCLDIR=/Projects/namd2/tcl/linux-amd64 -TCLINCL=-I$(TCLDIR)/include -I$(HOME)/tcl/include -TCLLIB=-L$(TCLDIR)/lib -L$(HOME)/tcl/lib -ltcl8.3 -ldl +-TCLFLAGS=-DNAMD_TCL +TCLINCL=-I/usr/include -+TCLLIB=-L/usr/lib -L$(HOME)/tcl/lib -ltcl -ldl - TCLFLAGS=-DNAMD_TCL -DUSE_NON_CONST ++TCLLIB=-L/usr/lib64 -L$(HOME)/tcl/lib -ltcl -ldl ++TCLFLAGS=-DNAMD_TCL -DUSE_NON_CONST TCL=$(TCLINCL) $(TCLFLAGS) |