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| author |   Gunnar Wrobel <wrobel@gentoo.org> | 2005-01-14 20:51:47 +0000 |
|---|---|---|
| committer | Gunnar Wrobel <wrobel@gentoo.org> | 2005-01-14 20:51:47 +0000 |
| commit | 6723cf7219bbbe5db2f5fdaa16428ce505787d8e (patch) | |
| tree | 4ad17483ad209954dcec91077cfec08a9325baf3 /sci-biology | |
| parent | Scripts and nntprss (diff) | |
| download | overlay-6723cf7219bbbe5db2f5fdaa16428ce505787d8e.tar.gz overlay-6723cf7219bbbe5db2f5fdaa16428ce505787d8e.tar.bz2 overlay-6723cf7219bbbe5db2f5fdaa16428ce505787d8e.zip | |
Added bioensembl ebuild. Seems to work
svn path=/; revision=73
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bioensembl/Manifest | 3 | ||||
| -rw-r--r-- | sci-biology/bioensembl/bioensembl-27.ebuild | 46 | ||||
| -rw-r--r-- | sci-biology/bioensembl/files/Makefile.PL | 10 | ||||
| -rw-r--r-- | sci-biology/bioensembl/files/digest-bioensembl-27 | 0 |
4 files changed, 59 insertions, 0 deletions
diff --git a/sci-biology/bioensembl/Manifest b/sci-biology/bioensembl/Manifest new file mode 100644 index 0000000..26c6901 --- /dev/null +++ b/sci-biology/bioensembl/Manifest @@ -0,0 +1,3 @@ +MD5 481ec341f0eb754dffb4a155fac35e32 bioensembl-27.ebuild 893 +MD5 1829efe7f24eb03244cb7f183f9aa491 files/Makefile.PL 311 +MD5 d41d8cd98f00b204e9800998ecf8427e files/digest-bioensembl-27 0 diff --git a/sci-biology/bioensembl/bioensembl-27.ebuild b/sci-biology/bioensembl/bioensembl-27.ebuild new file mode 100644 index 0000000..f8c6640 --- /dev/null +++ b/sci-biology/bioensembl/bioensembl-27.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2005 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.4.ebuild,v 1.4 2005/01/09 16:41:48 ribosome Exp $ + +inherit cvs perl-module + +CATEGORY="sci-biology" + +DESCRIPTION="additional perl modules fpr bioperl that can be used to easily access the ensembl database" +HOMEPAGE="http://www.ensembl.org/" + +LICENSE="Artistic GPL-2" +SLOT="0" +KEYWORDS="~x86" +IUSE="" + +ECVS_LOCALNAME="EnsEMBL" +ECVS_SERVER="cvsro.sanger.ac.uk:/cvsroot/CVSmaster" +ECVS_MODULE="ensembl/modules/Bio/EnsEMBL" +ECVS_BRANCH="branch-ensembl-27" +ECVS_USER="cvsuser" +ECVS_PASS="CVSUSER" + + +DEPEND="sci-biology/bioperl-1.4" + +src_unpack() +{ + cvs_src_unpack + + cp ${FILESDIR}/Makefile.PL ${WORKDIR}/ +} + +src_compile() +{ + cd ${WORKDIR} + + perl-module_src_compile +} + +src_install() +{ + cd ${WORKDIR} + + perl-module_src_install +} diff --git a/sci-biology/bioensembl/files/Makefile.PL b/sci-biology/bioensembl/files/Makefile.PL new file mode 100644 index 0000000..fdf0c0d --- /dev/null +++ b/sci-biology/bioensembl/files/Makefile.PL @@ -0,0 +1,10 @@ +use ExtUtils::MakeMaker 5.0; + +WriteMakefile( + NAME => "Bio::EnsEMBL", + VERSION => "27", + AUTHOR => "Sanger Center (ensembl-dev@ebi.ac.uk)", + ABSTRACT => "BioPerl modules to access ensembl", + INSTALLDIRS => "vendor", + PMLIBDIRS => [ "EnsEMBL" ] + ); diff --git a/sci-biology/bioensembl/files/digest-bioensembl-27 b/sci-biology/bioensembl/files/digest-bioensembl-27 new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/sci-biology/bioensembl/files/digest-bioensembl-27 |