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authorMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2017-07-28 21:15:48 +0200
committerMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2017-07-28 22:05:19 +0200
commit3fbc1ba7f4498b4999af3ed8fa51545a953c08a8 (patch)
tree61b8a6af7778317157a0bd79b3b95c635fea6ab5
parentsci-biology/khmer: added a comment how to proceed with src_compile() (diff)
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sci-biology/picard: version bump
Package-Manager: Portage-2.3.6, Repoman-2.3.3
-rw-r--r--sci-biology/picard/Manifest2
-rw-r--r--sci-biology/picard/picard-2.10.2.ebuild (renamed from sci-biology/picard/picard-2.9.0.ebuild)2
2 files changed, 2 insertions, 2 deletions
diff --git a/sci-biology/picard/Manifest b/sci-biology/picard/Manifest
index ecaa3b8..83c9ee5 100644
--- a/sci-biology/picard/Manifest
+++ b/sci-biology/picard/Manifest
@@ -1,3 +1,3 @@
DIST picard-1.141.tar.gz 5692255 SHA256 128e761b4dbedda9a89cceb4d1648be213ec823ff105a35db9c9526955a42320 SHA512 5fed8ff0076ec5f096a5138b95ae07805f8f4d68db33b65f2e21325f49493c50f235519768823c2db981b2e543fbf05f55be7939d75cbd5d257ac84e633b9bf4 WHIRLPOOL 5716cc51da6e94b338aceb5a3d01da5ae048f011e3d3eee72a96144d4b6f80dddf898ea902fae08b127f93c771f521437bd299bdeaf005af6f24c76f9844b63d
+DIST picard-2.10.2.tar.gz 35031761 SHA256 bb452782dd5ce5c988c70b41308a06d23293dcfe7468398adf00d2722fe31a6b SHA512 eb3dc4f0bd951faf06d955d62bded8890ab2cc165b97c4232300dd0b49e852a2e636657022850147fe0b728d4b4d0c616c7c7a9ddf2ba716c385f680b5ae6836 WHIRLPOOL c04523b30a0e7da74e318c223bb2fa1d165222889612229353a0a8d99f1d17162a5e4df19379612e1afd75abaceb51d5579008035ab3d8857f1816d80e57e1ef
DIST picard-2.2.2.tar.gz 6565857 SHA256 1d858fde23aa9938a87cd96e6c2fbbfcdea669c9f30d524c107af26bce3798de SHA512 4ee97443397b45236a2481fa64c80edbd7761d6562cc134d65f1d95fa101ccc82402bbf21ed6b186e15324f2c189737790066e18cd0143bb50768c20ee4b156b WHIRLPOOL 69df60c171a5e531b78ad670b260d717a749012d05028e1afba2484eb3a84a71e61ade13c7298b0e9bc6ff526367ca886d9440b996882d3f19455f8f46e3bd4f
-DIST picard-2.9.0.tar.gz 3860908 SHA256 a3d48d820d5e11d54ab78852df8b8221e992cefcea7dc0a4525fb0fd86e5adff SHA512 844303d6e420b20789f9c2e3232412ca16de0ae4d0409a2298f89f9c9c26a487ef356c91faf0eaa0fae009d0866d14481c6f1027d367cca830363c23cb5a0b96 WHIRLPOOL 15e715f812047972c3188e7dc6db83648c8d561d27fdecf4d194cb7ef8e4753a0ca051c492043c00fdd667219b2248d335fc09349e3a64f94acc5dd91621964d
diff --git a/sci-biology/picard/picard-2.9.0.ebuild b/sci-biology/picard/picard-2.10.2.ebuild
index c7a01ba..bddaded 100644
--- a/sci-biology/picard/picard-2.9.0.ebuild
+++ b/sci-biology/picard/picard-2.10.2.ebuild
@@ -43,7 +43,7 @@ java_prepare() {
src_compile(){
# work around gradle writing $HOME/.gradle and requiring $HOME/.git
# https://github.com/samtools/htsjdk/issues/660#issuecomment-232155965
- GRADLE_USER_HOME="${WORKDIR}" ./gradlew || die
+ GRADLE_USER_HOME="${WORKDIR}" ./gradlew --stacktrace --debug || die
}
#src_install() {