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authorJustin Lecher (jlec) <jlec@j-schmitz.net>2010-02-25 08:51:27 +0100
committerJustin Lecher (jlec) <jlec@j-schmitz.net>2010-02-25 08:51:27 +0100
commit464859f84218b546fdaa0637d1ee509c68855d44 (patch)
tree23e600a8100aad3677c868b969f8844f8480ce70
parentinCvs (diff)
downloadsci-464859f84218b546fdaa0637d1ee509c68855d44.tar.gz
sci-464859f84218b546fdaa0637d1ee509c68855d44.tar.bz2
sci-464859f84218b546fdaa0637d1ee509c68855d44.zip
InCvs
-rw-r--r--sci-chemistry/pymol-plugins-cealign/ChangeLog21
-rw-r--r--sci-chemistry/pymol-plugins-cealign/Manifest6
-rw-r--r--sci-chemistry/pymol-plugins-cealign/metadata.xml11
-rw-r--r--sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.8.ebuild39
-rw-r--r--sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9_beta.ebuild42
5 files changed, 0 insertions, 119 deletions
diff --git a/sci-chemistry/pymol-plugins-cealign/ChangeLog b/sci-chemistry/pymol-plugins-cealign/ChangeLog
deleted file mode 100644
index 2d69b974e..000000000
--- a/sci-chemistry/pymol-plugins-cealign/ChangeLog
+++ /dev/null
@@ -1,21 +0,0 @@
-# ChangeLog for sci-chemistry/pymol-plugins-cealign
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 01 Jul 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- pymol-plugins-cealign-0.9_beta.ebuild:
- QA
-
-*pymol-plugins-cealign-0.9_beta-r1 (01 Jul 2009)
-
- 01 Jul 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- +pymol-plugins-cealign-0.9_beta-r1.ebuild:
- change way of installation
-
-*pymol-plugins-cealign-0.9_beta (13 Mar 2009)
-*pymol-plugins-cealign-0.8 (13 Mar 2009)
-
- 13 Mar 2009; Justin Lecher (jlec) <jlec@j-schmitz.net> +metadata.xml,
- +pymol-plugins-cealign-0.8.ebuild, +pymol-plugins-cealign-0.9_beta.ebuild:
- Initial addition to sci overlay
-
diff --git a/sci-chemistry/pymol-plugins-cealign/Manifest b/sci-chemistry/pymol-plugins-cealign/Manifest
deleted file mode 100644
index e23c5b3cc..000000000
--- a/sci-chemistry/pymol-plugins-cealign/Manifest
+++ /dev/null
@@ -1,6 +0,0 @@
-DIST Cealign-0.8-RBS.tar.bz2 705887 RMD160 b8821273b8ae2d169ccdceb6090c62b17d6246dd SHA1 8be16ab694df0172d798e751ca8a3bfbbfc80a58 SHA256 e47ec3b3e2415d60d574e2083fc3afb5314757b8ba64d6ffc3db326a1d1c4678
-DIST Cealign-0.9.zip 766905 RMD160 fe7ee7fdcf8a7ca908c69e7de642318b3ec34867 SHA1 c57f8c1b46c192f276b1011f70c032cb7d2d5fb6 SHA256 87eee30c7757daae4baa3451246d813165f2317600da8d7bcde680ba0e822176
-EBUILD pymol-plugins-cealign-0.8.ebuild 900 RMD160 0d150b12a0f7b2a42414213b3619fe41e55f2b57 SHA1 2c93be18ac152b620965a9c2302b569260c7ef59 SHA256 86d55f043001c86ab8b61e60e59bdc9e49e7f6b13295119e66ca8ddc8913bbad
-EBUILD pymol-plugins-cealign-0.9_beta.ebuild 892 RMD160 16a889353394d7f4a0af62797649accc7e4d3dee SHA1 e1d0ad770f3e6e573950b8b73d1c301b36953fd2 SHA256 5c9e679d9f0aa3c2f82661e2b92510f46da0be7ef58eba2d4767df33123028a1
-MISC ChangeLog 694 RMD160 cc1fe35449f975b1472c1266239e85006e446b39 SHA1 d7cd0d89fe75f8e50527ce723cbb4e3d7c5f9eb6 SHA256 f6d3882bc81d57f1c8a2fbc332d67b6152d30ad1973ffd64a362f3e936161dad
-MISC metadata.xml 278 RMD160 8c0f2d68ac2582619f4d2f1abb119e3c81a64506 SHA1 026b34a4303ca5aac1be557b9e37d7e0aa0c0321 SHA256 57e54d97dd7cb579a4f885c6d50a98aee2fee82e5ebdac2fbb537401d155831d
diff --git a/sci-chemistry/pymol-plugins-cealign/metadata.xml b/sci-chemistry/pymol-plugins-cealign/metadata.xml
deleted file mode 100644
index 93b56cfbe..000000000
--- a/sci-chemistry/pymol-plugins-cealign/metadata.xml
+++ /dev/null
@@ -1,11 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci</herd>
-<maintainer>
- <email>sci@gentoo.org</email>
-</maintainer>
-<maintainer>
- <email>jlec@j-schmitz.net</email>
-</maintainer>
-</pkgmetadata>
diff --git a/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.8.ebuild b/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.8.ebuild
deleted file mode 100644
index c2d5ea566..000000000
--- a/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.8.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-inherit distutils
-PYTHON_MODNAME="cealign"
-
-SLOT="0"
-LICENSE="BSD"
-KEYWORDS="~x86 ~amd64"
-DESCRIPTION="The CE algorithm is a fast and accurate protein structure alignment algorithm."
-SRC_URI="http://www.pymolwiki.org/images/5/58/Cealign-${PV}-RBS.tar.bz2"
-HOMEPAGE="http://www.pymolwiki.org/index.php/Cealign"
-IUSE=""
-RESTRICT="mirror"
-DEPEND="dev-python/numpy
- >sci-chemistry/pymol-0.99"
-RDEPEND="${DEPEND}"
-
-S=${WORKDIR}/cealign-${PV}-RBS
-
-src_install(){
- mtype=$(uname -m)
-
- distutils_src_install
-
- insinto $(python_get_sitedir)/cealign
- doins qkabsch.py cealign.py
-
- cat >> "${T}"/pymolrc <<- EOF
- run $(python_get_sitedir)/cealign/qkabsch.py
- run $(python_get_sitedir)/cealign/cealign.py
- EOF
-
- insinto ${PYMOL_PATH}
- doins "${T}"/pymolrc
-
- dodoc CHANGES doc/cealign.pdf
-}
diff --git a/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9_beta.ebuild b/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9_beta.ebuild
deleted file mode 100644
index b0473999b..000000000
--- a/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9_beta.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-PYTHON_MODNAME="cealign"
-
-inherit distutils
-
-DESCRIPTION="The CE algorithm is a fast and accurate protein structure alignment algorithm."
-HOMEPAGE="http://www.pymolwiki.org/index.php/Cealign"
-SRC_URI="http://www.pymolwiki.org/images/0/03/Cealign-0.9.zip"
-
-SLOT="0"
-LICENSE="BSD"
-KEYWORDS="~x86 ~amd64"
-IUSE=""
-
-DEPEND="dev-python/numpy
- >sci-chemistry/pymol-0.99"
-RDEPEND=""
-
-RESTRICT="mirror"
-S=${WORKDIR}/cealign-0.9
-
-src_install(){
- mtype=$(uname -m)
-
- distutils_src_install
-
- insinto $(python_get_sitedir)/cealign
- doins qkabsch.py cealign.py || die
-
- cat >> "${T}"/pymolrc <<- EOF
- run $(python_get_sitedir)/cealign/qkabsch.py
- run $(python_get_sitedir)/cealign/cealign.py
- EOF
-
- insinto ${PYMOL_PATH}
- doins "${T}"/pymolrc || die
-
- dodoc CHANGES doc/cealign.pdf
-}