sci-physics/abinit: Drop old

Package-Manager: portage-2.2.0_alpha164

3 files changed, 3 insertions, 336 deletions

diff --git a/sci-physics/abinit/ChangeLog b/sci-physics/abinit/ChangeLog
index aad695b64..72028dd6b 100644
--- a/sci-physics/abinit/ChangeLog
+++ b/sci-physics/abinit/ChangeLog
@@ -2,6 +2,9 @@
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  03 Mar 2013; Justin Lecher <jlec@gentoo.org> -abinit-6.12.3-r2.ebuild:
+  Drop old
+
   22 Feb 2013; Justin Lecher <jlec@gentoo.org> abinit-6.12.3-r2.ebuild,
   abinit-7.0.4.ebuild, abinit-7.0.5.ebuild, metadata.xml:
   Use tc-getPKG_CONFIG from toolchain-funcs.eclass instead of plain pkg-config;
diff --git a/sci-physics/abinit/Manifest b/sci-physics/abinit/Manifest
index 1663924dd..dee036578 100644
--- a/sci-physics/abinit/Manifest
+++ b/sci-physics/abinit/Manifest
@@ -1,3 +1,2 @@
-DIST abinit-6.12.3.tar.gz 58483889 SHA256 243a3832e258d12998d9d188141cfedeabdbfee9867c1951d7f27b8230dec5e9 SHA512 a14764c7c031890ea9cb64dd8fb439959fae4b50d59985bd2e9d9c12a06f71f92491c015c64c7273b4089cd57934a699f3d4c3c2f377032cbd655aa887241a65 WHIRLPOOL caa5e8159fac7353ee87663f195419acee57246f1a3015941368ed026c3a15a07cf135dbf57fc8a81f0cdd24c042af1ccc1c63e3e20a73042d3462530bd5b904
 DIST abinit-7.0.4.tar.gz 61715030 SHA256 b3ad895b75b92b3ff05e873d42d0b26f6e6113b9de4579966f7b6d1b49d6004e SHA512 8edfe4019c968e6f912d0678fe331fc8a6ce2848f1b16973336d4181d010a776ed1ea2c5500499dac895d9d773d72165e20524705cf8928f91ede873272b0417 WHIRLPOOL 35da8681a68e435b460a11112e6cf6990fdf141d53d5849be45225d50e803e2bfc65cb05e5e576c704411be5734e47ed2e4ccca1fd1689311bd4febea937f0f8
 DIST abinit-7.0.5.tar.gz 61711550 SHA256 b16556aa05448781d872ab18f76ca6446a52be9eeed8d22015a0b63f4adf0f54 SHA512 007292cc7cdf459a5d62e907b29009d9496955952b5f491fa9183a5abb86dbf48020eb435b784d74037e381d65d2255a2b9a130322ee9bfecbff8ca075488ecd WHIRLPOOL 74d83a3a05817eaca402ace1b7ec3c3a6db3697a7ca0166549aee8155edfa2a7c8d516e2ae210a6f0e855f72617d704785bbb10e3a3ee262140964913608a307
diff --git a/sci-physics/abinit/abinit-6.12.3-r2.ebuild b/sci-physics/abinit/abinit-6.12.3-r2.ebuild
deleted file mode 100644
index 0eb2c6f72..000000000
--- a/sci-physics/abinit/abinit-6.12.3-r2.ebuild
+++ /dev/null
@@ -1,335 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=4
-
-inherit autotools-utils eutils flag-o-matic fortran-2 multilib toolchain-funcs
-
-DESCRIPTION="Find total energy, charge density and electronic structure using density functional theory"
-HOMEPAGE="http://www.abinit.org/"
-SRC_URI="http://ftp.abinit.org/${P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="cuda cuda-double -debug +etsf_io +fftw +fftw-threads +fox gsl gui +hdf5 libabinit mpi +netcdf python -test +threads -vdwxc"
-
-RDEPEND="~sci-libs/bigdft-1.6_pre1
-	=sci-libs/libxc-1*[fortran]
-	sci-physics/atompaw[libxc]
-	etsf_io? ( sci-libs/etsf_io )
-	fox? ( >=sci-libs/fox-4.1.2-r1[sax] )
-	netcdf? (
-		|| (
-			sci-libs/netcdf[fortran]
-			sci-libs/netcdf-fortran
-			)
-		hdf5? (
-			  sci-libs/netcdf[hdf5]
-			  )
-		)
-	hdf5? ( sci-libs/hdf5[fortran] )
-	sci-libs/wannier90
-	virtual/blas
-	virtual/lapack
-	gsl? ( sci-libs/gsl )
-	fftw? (
-		sci-libs/fftw:3.0
-		fftw-threads? ( sci-libs/fftw:3.0[threads] )
-		)
-	mpi? ( virtual/mpi )
-	python? ( dev-python/numpy )
-	cuda? ( dev-util/nvidia-cuda-sdk )"
-DEPEND="${RDEPEND}
-	virtual/pkgconfig
-	gui? ( >=virtual/jdk-1.6.0
-		app-arch/sharutils
-		sys-apps/gawk )
-	dev-perl/Text-Markdown"
-
-S=${WORKDIR}/${P%[a-z]}
-
-lat1loc=""
-
-DOCS=( AUTHORS ChangeLog COPYING INSTALL KNOWN_PROBLEMS NEWS PACKAGING
-	README README.ChangeLog README.GPU README.xlf RELNOTES THANKS )
-
-FORTRAN_STANDARD=90
-
-pkg_setup() {
-	# Doesn't compile with gcc-4.0, only >=4.1
-	if [[ $(tc-getFC) == *gfortran ]]; then
-		if [[ $(gcc-major-version) -eq 4 ]] \
-			&& [[ $(gcc-minor-version) -lt 1  ]]; then
-				die "Requires gcc-4.1 or newer"
-		fi
-	fi
-
-	# fortran-2.eclass does not handle mpi wrappers
-	if use mpi; then
-		export FC="mpif90"
-		export F77="mpif77"
-		export CC="mpicc"
-		export CXX="mpic++"
-	else
-		tc-export FC F77 CC CXX
-	fi
-
-	# Preprocesor macross can make some lines really long
-	append-fflags -ffree-line-length-none
-
-	fortran-2_pkg_setup
-
-	# Sort out some USE options
-	if use fftw-threads && ! use fftw; then
-		ewarn "fftw-threads set but fftw not used, ignored"
-	fi
-	if use cuda-double && ! use cuda; then
-		ewarn "cuda-double set but cuda not used, ignored"
-	fi
-	if use gui; then
-		lat1loc="$(locale |awk '/LC_CTYPE="(.*)"/{sub("LC_CTYPE=\"",""); sub("\" *$", ""); print}')"
-		if locale charmap |grep -i "\<iso885915\?\>"; then
-			einfo "Good, locale compatible with the GUI build"
-		else
-			ewarn "The locale ${lat1loc} incompatible with the GUI build"
-			if latloc=`locale -a| grep -i "\<iso885915\?\>"`; then
-				if echo "${latloc}" |grep -q "^fr"; then
-					lat1loc="$(echo "${latloc}" | grep -im1 "^fr")"
-				else
-					lat1loc="$(echo "${latloc}" | grep -im1 "iso88591")"
-				fi
-				einfo "Will use ${lat1loc} to build the GUI"
-			else
-				ewarn "No ISO-8859-1 nor ISO-8859-15 locale available, the GUI build may crash"
-			fi
-		fi
-	fi
-}
-
-src_prepare() {
-	epatch \
-		"${FILESDIR}"/6.2.2-change-default-directories.patch \
-		"${FILESDIR}"/6.0.3-fftw.patch \
-		"${FILESDIR}"/6.12.1-autoconf.patch \
-		"${FILESDIR}"/6.12.1-xmalloc.patch \
-		"${FILESDIR}"/6.12.1-libabinit_options.patch
-	eautoreconf
-
-}
-
-src_configure() {
-	local libs="-L/usr/$(get_libdir)"
-	local modules="-I/usr/$(get_libdir)/finclude $(FoX-config --sax --fcflags)"
-	local FoX_libs="${libs} $(FoX-config --sax --libs)"
-	local trio_flavor=""
-	use etsf_io && trio_flavor="${trio_flavor}+etsf_io"
-	use fox && trio_flavor="${trio_flavor}+fox"
-	use netcdf && trio_flavor="${trio_flavor}+netcdf"
-	test "no${trio_flavor}" = "no" && trio_flavor="none"
-	local netcdff_libs="-lnetcdff"
-	use hdf5 && netcdff_libs="${netcdff_libs} -lhdf5_fortran"
-	local fft_flavor="fftw3"
-	local fft_libs="-L/usr/lib"
-	# The fftw threads support is protected by black magick.
-	# Anybody removes it, dies.
-	# New USE flag "fftw-threads" was added to control usage
-	# of the threaded fftw variant. Since fftw-3.3 has expanded
-	# the paralel options by MPI and OpenMP support, analogical
-	# USE flags should be added to select them in future;
-	# unusable with previous FFTW versions, they are postponed
-	# for now.
-	if use fftw-threads; then
-		fft_flavor="fftw3-threads"
-		if has_version '>=sci-libs/fftw-3.3'; then
-			# pkg-config files for fftw-3.3 are broken
-			# All the parallel stuff is separated
-			# from the main body of common routines,
-			# and -lfftw3 must be always included alongside.
-			# Until version 3.3 this used to be masked by
-			# .la files.
-			# Bug 384645
-			fft_libs="${fft_libs} $($(tc-getPKG_CONFIG) --libs fftw3_threads) $($(tc-getPKG_CONFIG) --libs fftw3)"
-		else
-			fft_libs="${fft_libs} $($(tc-getPKG_CONFIG) --libs fftw3_threads)"
-		fi
-	else
-		fft_libs="${fft_libs} $($(tc-getPKG_CONFIG) --libs fftw3)"
-	fi
-	local gpu_flavor="none"
-	if use cuda; then
-		gpu_flavor="cuda-single"
-		if use cuda-double; then
-			gpu_flavor="cuda-double"
-		fi
-	fi
-
-	local myeconfargs=(
-		--enable-clib
-		--enable-exports
-		$(use_enable gui)
-		$(use_enable debug debug enhanced)
-		$(use_enable mpi)
-		$(use_enable mpi mpi-io)
-		--disable-smp
-		$(use_enable vdwxc)
-		$(use_enable cuda gpu)
-		"$(use cuda && echo "--with-gpu-flavor=${gpu_flavor}")"
-		"$(use cuda && echo "--with-gpu-prefix=/opt/cuda/")"
-		"$(use gsl && echo "--with-math-flavor=gsl")"
-		"$(use gsl && echo "--with-math-incs=$($(tc-getPKG_CONFIG) --cflags gsl)")"
-		"$(use gsl && echo "--with-math-libs=$($(tc-getPKG_CONFIG) --libs gsl)")"
-		--with-linalg-flavor="atlas"
-		--with-linalg-libs="$($(tc-getPKG_CONFIG) --libs lapack)"
-		--with-trio-flavor="${trio_flavor}"
-		"$(use netcdf && echo "--with-netcdf-incs=-I/usr/include")"
-		"$(use netcdf && echo "--with-netcdf-libs=$($(tc-getPKG_CONFIG) --libs netcdf) ${netcdff_libs}")"
-		"$(use fox && echo "--with-fox-incs=${modules}")"
-		"$(use fox && echo "--with-fox-libs=${FoX_libs}")"
-		"$(use etsf_io && echo "--with-etsf-io-incs=${modules}")"
-		"$(use etsf_io && echo "--with-etsf-io-libs=${libs} -letsf_io -letsf_io_utils -letsf_io_low_level")"
-		--with-dft-flavor="libxc+bigdft+atompaw+wannier90"
-		--with-libxc-incs="${modules}"
-		--with-libxc-libs="${libs} -lxc"
-		--with-bigdft-incs="${modules}"
-		--with-bigdft-libs="$($(tc-getPKG_CONFIG) --libs bigdft)"
-		--with-atompaw-incs="${modules}"
-		--with-atompaw-libs="${libs} -latompaw"
-		--with-wannier90-bins="/usr/bin"
-		--with-wannier90-incs="${modules}"
-		--with-wannier90-libs="${libs} -lwannier $($(tc-getPKG_CONFIG) --libs lapack)"
-		"$(use fftw && echo "--with-fft-flavor=${fft_flavor}")"
-		"$(use fftw && echo "--with-fft-incs=-I/usr/include")"
-		"$(use fftw && echo "--with-fft-libs=${fft_libs}")"
-		--with-timer-flavor="abinit"
-		LD="$(tc-getLD)"
-		FCFLAGS="${FCFLAGS:- ${FFLAGS:- -O2}} ${modules} -I/usr/include"
-		)
-
-	MARKDOWN=Markdown.pl autotools-utils_src_configure
-
-	if use gui; then
-		# autotools-utils_src_configure() part expanded
-		_check_build_dir
-		pushd "${AUTOTOOLS_BUILD_DIR}" > /dev/null
-		mkdir -p gui
-		cd gui
-		ECONF_SOURCE="${S}"/gui econf UUDECODE="uudecode"
-	fi
-}
-
-src_compile() {
-	autotools-utils_src_compile
-
-	# Apparently libabinit.a is not built by default
-	# Used by BigDFT. Should probably be built separately,
-	# as a package of its own: BigDFT used by Abinit.
-	# Does libabinit.a depend on BigDFT, if used?
-	# Can Abinit use external libabinit.a?
-	use libabinit && autotools-utils_src_compile libabinit.a
-
-	if use gui; then
-		#autotools-utils_src_compile() expanded
-		# _check_build_dir has already been called
-		pushd "${AUTOTOOLS_BUILD_DIR}" > /dev/null
-		# now what the function cannot be called to do
-		cd gui
-		LC_CTYPE="${lat1loc}" emake || die "Making GUI failed"
-		popd > /dev/null
-	fi
-
-	sed -i -e's/libatlas/lapack/' "${AUTOTOOLS_BUILD_DIR}"/config.pc
-}
-
-src_test() {
-	einfo "The tests take quite a while, easily several hours"
-	# autotools-utils_src_test() expanded
-	_check_build_dir
-	pushd "${AUTOTOOLS_BUILD_DIR}" > /dev/null
-	# again something the autotools-utils function cannot be called to do
-	# now quite a lot of work actually
-	cd tests
-	emake tests_acc || ewarn "Accuracy tests failed"
-	emake tests_paw || ewarn "PAW tests failed"
-	emake tests_gw || ewarn "GW tests failed"
-	emake tests_gw_paw || ewarn "GW-PAW tests failed"
-	emake tests_bs || ewarn "BSE tests failed"
-	emake tests_tddft || ewarn "TDDFT tests failed"
-	emake tests_eph || ewarn "Elphon tests failed"
-
-	local REPORT
-	for REPORT in $(find . -name report); do
-		REPORT=${REPORT#*/}
-		elog "Parameters and unusual results for ${REPORT%%/*} tests"
-		echo "Parameters and unusual results for ${REPORT%%/*} tests" >>tests_summary.txt
-		while read line; do
-			elog "${line}"
-			echo "${line}" >>tests_summary.txt
-		done \
-			< <(grep -v -e succeeded -e passed ${REPORT})
-	done
-
-	local testdir
-	find . -name "tmp-test*" -print | \
-		while read testdir; do
-			if [ -e summary_of_tests.tar ]; then
-				tar rvf summary_of_tests.tar ${testdir}
-			else tar cvf summary_of_tests.tar ${testdir}
-			fi
-		done
-	popd > /dev/null
-
-	elog "The full test results will be installed as summary_of_tests.tar.bz2."
-	elog "Also a concise report tests_summary.txt is installed."
-}
-
-src_install() {
-	#autotools-utils_src_install() expanded
-	_check_build_dir
-	pushd "${AUTOTOOLS_BUILD_DIR}" > /dev/null
-	emake DESTDIR="${D}" install || die "make install failed"
-
-	use libabinit && dolib libabinit.a
-
-	if use gui; then
-		pushd gui
-		emake DESTDIR="${D}" install || die "The GUI install failed"
-		popd
-	fi
-
-	if use test; then
-		for dc in tests_summary.txt summary_of_tests.tar; do
-			test -e tests/"${dc}" && dodoc tests/"${dc}" || ewarn "Copying tests results failed"
-		done
-	fi
-
-	popd > /dev/null
-
-	# XXX: support installing them from builddir as well!!!
-	if [[ ${DOCS} ]]; then
-		dodoc "${DOCS[@]}" || die "dodoc failed"
-	else
-		local f
-		# same list as in PMS
-		for f in README* ChangeLog AUTHORS NEWS TODO CHANGES \
-				THANKS BUGS FAQ CREDITS CHANGELOG; do
-			if [[ -s ${f} ]]; then
-				dodoc "${f}" || die "(default) dodoc ${f} failed"
-			fi
-		done
-	fi
-	if [[ ${HTML_DOCS} ]]; then
-		dohtml -r "${HTML_DOCS[@]}" || die "dohtml failed"
-	fi
-
-	# Remove libtool files and unnecessary static libs
-	remove_libtool_files
-}
-
-pkg_postinst() {
-	if use test; then
-		elog "The full test results will be installed as summary_tests.tar.bz2."
-		elog "Also a concise report tests_summary.txt is installed."
-	fi
-}