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| author |   Martin Mokrejs <mmokrejs@gmail.com> | 2021-10-19 17:06:25 +0200 |
|---|---|---|
| committer | Martin Mokrejs <mmokrejs@gmail.com> | 2021-10-19 17:06:25 +0200 |
| commit | 6c45174a480dae72e147dbf764bda33b72404a56 (patch) | |
| tree | 2e4f0154319a9d3affe8640caa0bdc041e7a4c91 | |
| parent | sci-biology/tigmint: add missing dependencies not listed by upstream (diff) | |
| download | sci-6c45174a480dae72e147dbf764bda33b72404a56.tar.gz sci-6c45174a480dae72e147dbf764bda33b72404a56.tar.bz2 sci-6c45174a480dae72e147dbf764bda33b72404a56.zip | |
sci-biology/tigmint: drop KEYWORDS until python install path is fixed
The 'from read_fasta import read_fasta' is supposed to work but Makefile
places the file into $prefix.
Package-Manager: Portage-3.0.28, Repoman-3.0.3
Signed-off-by: Martin Mokrejs <mmokrejs@gmail.com>
| -rw-r--r-- | sci-biology/tigmint/tigmint-1.2.4.ebuild | 27 |
1 files changed, 26 insertions, 1 deletions
diff --git a/sci-biology/tigmint/tigmint-1.2.4.ebuild b/sci-biology/tigmint/tigmint-1.2.4.ebuild index 89d73318d..1b181ea44 100644 --- a/sci-biology/tigmint/tigmint-1.2.4.ebuild +++ b/sci-biology/tigmint/tigmint-1.2.4.ebuild @@ -13,7 +13,7 @@ SRC_URI="https://github.com/bcgsc/tigmint/releases/download/v${PV}/${P}.tar.gz" LICENSE="GPL-3" SLOT="0" -KEYWORDS="~amd64 ~x86" +KEYWORDS="" RESTRICT="test" @@ -28,3 +28,28 @@ RDEPEND=" " distutils_enable_tests pytest + +# install the executable into /usr/bin +# BUG: the read_fasta.py should be installed into python modules +# so it can be imported into python +src_prepare(){ + sed -i Makefile -e 's#prefix=/usr/local#prefix=/usr#' + default +} + +src_configure(){ + python_setup + default +} + +# do not run src_compile step as it runs git, makefile2graph, gsed, tred + +src_install(){ + default + distutils-r1_src_install +} + +src_test(){ + default + python_foreach_impl python_test +} |