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| author |   Kacper Kowalik (Xarthisius) <xarthisius@gentoo.org> | 2012-03-22 21:45:24 +0100 |
|---|---|---|
| committer | Kacper Kowalik (Xarthisius) <xarthisius@gentoo.org> | 2012-03-22 21:45:24 +0100 |
| commit | 71f00681dcb0bb8c092bfb2f8de1ed58867edf5e (patch) | |
| tree | 37cf4be82b9e6990e427c804ad576256070d6d2f | |
| parent | Bump intel compiler suite (diff) | |
| parent | New package, ebuild written by me (diff) | |
| download | sci-71f00681dcb0bb8c092bfb2f8de1ed58867edf5e.tar.gz sci-71f00681dcb0bb8c092bfb2f8de1ed58867edf5e.tar.bz2 sci-71f00681dcb0bb8c092bfb2f8de1ed58867edf5e.zip | |
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci
| -rw-r--r-- | sci-biology/blasr/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/blasr/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/blasr/blasr-9999.ebuild | 33 | ||||
| -rw-r--r-- | sci-biology/blasr/metadata.xml | 9 |
4 files changed, 53 insertions, 0 deletions
diff --git a/sci-biology/blasr/ChangeLog b/sci-biology/blasr/ChangeLog new file mode 100644 index 000000000..f10ba2293 --- /dev/null +++ b/sci-biology/blasr/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/blasr +# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*blasr-9999 (22 Mar 2012) + + 22 Mar 2012; Andrey Kislyuk <weaver@gentoo.org> +blasr-9999.ebuild, + +metadata.xml: + New package, ebuild written by me + diff --git a/sci-biology/blasr/Manifest b/sci-biology/blasr/Manifest new file mode 100644 index 000000000..1e05a5de4 --- /dev/null +++ b/sci-biology/blasr/Manifest @@ -0,0 +1 @@ +EBUILD blasr-9999.ebuild 754 RMD160 47ec5b2ff70974554df65b9dd30a72bba0b3c317 SHA1 405660e484529b7ad7153398b7214f0bc3b96e70 SHA256 06ccd4903d54cbb539f273c6508963548b1f3f716ca89c29fbb35ccc45e5de5f diff --git a/sci-biology/blasr/blasr-9999.ebuild b/sci-biology/blasr/blasr-9999.ebuild new file mode 100644 index 000000000..94e874fa1 --- /dev/null +++ b/sci-biology/blasr/blasr-9999.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/gatk/gatk-9999.ebuild,v 1.1 2011/10/31 21:18:17 weaver Exp $ + +EAPI=4 + +MY_HASH=885c33a + +EGIT_REPO_URI="https://github.com/PacificBiosciences/blasr.git" + +inherit git + +DESCRIPTION="The PacBio long read aligner" +HOMEPAGE="http://www.smrtcommunity.com/SMRT-Analysis/Algorithms/BLASR" +#SRC_URI="https://github.com/PacificBiosciences/blasr/tarball/${PV} -> ${P}.tar.gz" +SRC_URI="" + +LICENSE="as-is" +SLOT="0" +IUSE="" +KEYWORDS="" + +DEPEND="sci-libs/hdf5[cxx]" +RDEPEND="" + +S="${WORKDIR}/blasr-${MY_HASH}" + +ASSEMBLY_HOME="${D}/usr" + +src_install() { + dodir /usr/bin + make install ASSEMBLY_HOME="${D}/usr" || die +} diff --git a/sci-biology/blasr/metadata.xml b/sci-biology/blasr/metadata.xml new file mode 100644 index 000000000..3302123e5 --- /dev/null +++ b/sci-biology/blasr/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> |