aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorS├ębastien Fabbro <bicatali@gentoo.org>2013-06-13 11:36:58 -0700
committerS├ębastien Fabbro <bicatali@gentoo.org>2013-06-13 11:36:58 -0700
commit7a71d68f2f6ee9e5f715c8521ab73072fb8c91aa (patch)
tree68cb2992722bf733205407ae42dfb6c64b07816a
parentmpe2: main tree more up to date (diff)
downloadsci-7a71d68f2f6ee9e5f715c8521ab73072fb8c91aa.tar.gz
sci-7a71d68f2f6ee9e5f715c8521ab73072fb8c91aa.tar.bz2
sci-7a71d68f2f6ee9e5f715c8521ab73072fb8c91aa.zip
manifests fixes
-rw-r--r--app-doc/blacs-docs/Manifest2
-rw-r--r--app-doc/blas-docs/Manifest6
-rw-r--r--app-doc/lapack-docs/Manifest4
-rw-r--r--app-doc/root-docs/Manifest5
-rw-r--r--app-text/dgs/Manifest2
-rw-r--r--app-vim/freefem++-syntax/Manifest2
-rw-r--r--dev-cpp/growler-arch/Manifest4
-rw-r--r--dev-cpp/growler-core/Manifest2
-rw-r--r--dev-cpp/growler-math/Manifest2
-rw-r--r--dev-cpp/growler-thread/Manifest2
-rw-r--r--dev-java/jeuclid-core/Manifest2
-rw-r--r--dev-java/joda-convert/Manifest2
-rw-r--r--dev-java/vecmath/Manifest4
-rw-r--r--dev-libs/libunzip/Manifest2
-rw-r--r--dev-libs/simclist/Manifest5
-rw-r--r--dev-ml/mlgmpidl/Manifest6
-rw-r--r--dev-ml/ocamlgraph/Manifest4
-rw-r--r--dev-perl/BTLib/Manifest2
-rw-r--r--dev-perl/Lab-Instrument/Manifest2
-rw-r--r--dev-perl/Lab-Tools/Manifest2
-rw-r--r--dev-perl/Lab-VISA/Manifest2
-rw-r--r--dev-perl/go-db-perl/Manifest2
-rw-r--r--dev-perl/opal-client/Manifest2
-rw-r--r--dev-python/instant/Manifest2
-rw-r--r--dev-python/meshpy/Manifest2
-rw-r--r--dev-python/numpydoc/Manifest2
-rw-r--r--dev-python/omniorbpy/Manifest2
-rw-r--r--dev-python/opal-client/Manifest2
-rw-r--r--dev-python/pyhdf/Manifest2
-rw-r--r--dev-python/pythoncgns/Manifest2
-rw-r--r--dev-python/ufl/Manifest2
-rw-r--r--dev-python/viper/Manifest2
-rw-r--r--dev-tcltk/togl/Manifest2
-rw-r--r--dev-util/smartgit/Manifest2
-rw-r--r--media-libs/OpenMOIV/Manifest2
-rw-r--r--media-libs/avbin-bin/Manifest4
-rw-r--r--media-libs/libgfx/Manifest2
-rw-r--r--net-firewall/gcb/Manifest2
-rw-r--r--net-ftp/bbftp-client/Manifest2
-rw-r--r--net-ftp/bbftp-server/Manifest2
-rw-r--r--net-misc/bbscp/Manifest2
-rw-r--r--perl-core/encoding-warnings/Manifest2
-rw-r--r--sci-astronomy/astrometry/Manifest1
-rw-r--r--sci-astronomy/astrometry/files/0.38-system-libs.patch2
-rw-r--r--sci-biology/ONTO-PERL/Manifest2
-rw-r--r--sci-biology/align_to_scf/Manifest2
-rw-r--r--sci-biology/amos-short/Manifest2
-rw-r--r--sci-biology/argo-bin/Manifest2
-rw-r--r--sci-biology/argo/Manifest2
-rw-r--r--sci-biology/autoeditor/Manifest4
-rw-r--r--sci-biology/bambus/Manifest2
-rw-r--r--sci-biology/brat/Manifest2
-rw-r--r--sci-biology/caftools/Manifest4
-rw-r--r--sci-biology/cap3-bin/Manifest4
-rw-r--r--sci-biology/cdbfasta/Manifest2
-rw-r--r--sci-biology/clover/Manifest4
-rw-r--r--sci-biology/clview/Manifest4
-rw-r--r--sci-biology/codonw/Manifest2
-rw-r--r--sci-biology/dawg/Manifest2
-rw-r--r--sci-biology/embassy-cbstools/Manifest2
-rw-r--r--sci-biology/embassy-domainatrix/Manifest2
-rw-r--r--sci-biology/embassy-domalign/Manifest2
-rw-r--r--sci-biology/embassy-domsearch/Manifest2
-rw-r--r--sci-biology/embassy-emnu/Manifest2
-rw-r--r--sci-biology/embassy-esim4/Manifest2
-rw-r--r--sci-biology/embassy-hmmer/Manifest2
-rw-r--r--sci-biology/embassy-iprscan/Manifest2
-rw-r--r--sci-biology/embassy-mse/Manifest2
-rw-r--r--sci-biology/embassy-phylipnew/Manifest2
-rw-r--r--sci-biology/embassy-signature/Manifest2
-rw-r--r--sci-biology/embassy-structure/Manifest2
-rw-r--r--sci-biology/embassy-topo/Manifest2
-rw-r--r--sci-biology/embassy-vienna/Manifest2
-rw-r--r--sci-biology/erpin/Manifest4
-rw-r--r--sci-biology/est2uni/Manifest10
-rw-r--r--sci-biology/fastdnaml/Manifest4
-rw-r--r--sci-biology/gap2caf/Manifest4
-rw-r--r--sci-biology/gbench/Manifest2
-rw-r--r--sci-biology/genepop/Manifest2
-rw-r--r--sci-biology/generecon/Manifest2
-rw-r--r--sci-biology/genseed/Manifest2
-rw-r--r--sci-biology/grappa/Manifest2
-rw-r--r--sci-biology/jalview/Manifest2
-rw-r--r--sci-biology/lucy/Manifest2
-rw-r--r--sci-biology/mavid/Manifest2
-rw-r--r--sci-biology/merlin/Manifest2
-rw-r--r--sci-biology/miranda/Manifest2
-rw-r--r--sci-biology/mrbayes/Manifest2
-rw-r--r--sci-biology/mreps/Manifest2
-rw-r--r--sci-biology/mrfast/Manifest2
-rw-r--r--sci-biology/mrsfast/Manifest2
-rw-r--r--sci-biology/nrcl/Manifest4
-rw-r--r--sci-biology/perlprimer/Manifest2
-rw-r--r--sci-biology/proda/Manifest2
-rw-r--r--sci-biology/psx/Manifest2
-rw-r--r--sci-biology/quicktree/Manifest2
-rw-r--r--sci-biology/rnaplex/Manifest2
-rw-r--r--sci-biology/roche454ace2caf/Manifest2
-rw-r--r--sci-biology/sclust/Manifest4
-rw-r--r--sci-biology/sequin/Manifest4
-rw-r--r--sci-biology/sff_dump/Manifest2
-rw-r--r--sci-biology/signalp/Manifest2
-rw-r--r--sci-biology/smalt-bin/Manifest2
-rw-r--r--sci-biology/ssaha2-bin/Manifest10
-rw-r--r--sci-biology/swissknife/Manifest2
-rw-r--r--sci-biology/tablet-bin/Manifest2
-rw-r--r--sci-biology/tclust/Manifest4
-rw-r--r--sci-biology/tgicl/Manifest2
-rw-r--r--sci-biology/tigr-assembler/Manifest2
-rw-r--r--sci-biology/tigr-foundation-libs/Manifest2
-rw-r--r--sci-biology/tmhmm/Manifest2
-rw-r--r--sci-biology/twinscan/Manifest2
-rw-r--r--sci-biology/zmsort/Manifest4
-rw-r--r--sci-chemistry/almost/Manifest2
-rw-r--r--sci-chemistry/bist/Manifest2
-rw-r--r--sci-chemistry/cnsface/Manifest2
-rw-r--r--sci-chemistry/direx/Manifest2
-rw-r--r--sci-chemistry/drawxtl/Manifest4
-rw-r--r--sci-chemistry/dssp2pdb/Manifest2
-rw-r--r--sci-chemistry/jana2000/Manifest2
-rw-r--r--sci-chemistry/jmol/Manifest2
-rw-r--r--sci-chemistry/mage/Manifest2
-rw-r--r--sci-chemistry/modeller/Manifest2
-rw-r--r--sci-chemistry/mtz2hkl/Manifest2
-rw-r--r--sci-chemistry/mtz2sca/Manifest2
-rw-r--r--sci-chemistry/phaser/Manifest2
-rw-r--r--sci-chemistry/polygon/Manifest4
-rw-r--r--sci-chemistry/pyquante/Manifest2
-rw-r--r--sci-chemistry/rosetta-tools/Manifest2
-rw-r--r--sci-chemistry/shiftx/Manifest2
-rw-r--r--sci-chemistry/smmp/Manifest2
-rw-r--r--sci-chemistry/unio/Manifest4
-rw-r--r--sci-electronics/player/Manifest2
-rw-r--r--sci-electronics/stage/Manifest2
-rw-r--r--sci-electronics/tnt/Manifest2
-rw-r--r--sci-geosciences/cdat-lite/Manifest4
-rw-r--r--sci-geosciences/congen/Manifest2
-rw-r--r--sci-geosciences/harmonics-dwf-free-noncomm/Manifest2
-rw-r--r--sci-geosciences/harmonics-dwf-free/Manifest4
-rw-r--r--sci-geosciences/libtcd/Manifest4
-rw-r--r--sci-geosciences/seawater/Manifest2
-rw-r--r--sci-geosciences/swmm/Manifest2
-rw-r--r--sci-geosciences/tappy/Manifest2
-rw-r--r--sci-geosciences/tcd-utils/Manifest4
-rw-r--r--sci-geosciences/xtide/Manifest4
-rw-r--r--sci-libs/calculix-cgx/Manifest4
-rw-r--r--sci-libs/cgnsfoam/Manifest2
-rw-r--r--sci-libs/cgnslib/Manifest2
-rw-r--r--sci-libs/cnsface-scripts/Manifest2
-rw-r--r--sci-libs/dcmtk/Manifest6
-rw-r--r--sci-libs/driftwood/Manifest2
-rw-r--r--sci-libs/etsf_io/Manifest2
-rw-r--r--sci-libs/factory/Manifest2
-rw-r--r--sci-libs/fgsl/Manifest4
-rw-r--r--sci-libs/fox/Manifest12
-rw-r--r--sci-libs/fplll/Manifest2
-rw-r--r--sci-libs/framewave/Manifest2
-rw-r--r--sci-libs/geom/Manifest2
-rw-r--r--sci-libs/givaro/Manifest4
-rw-r--r--sci-libs/libcgnsoo/Manifest2
-rw-r--r--sci-libs/libfac/Manifest4
-rw-r--r--sci-libs/libxc/Manifest2
-rw-r--r--sci-libs/lwpr/Manifest2
-rw-r--r--sci-libs/m4ri/Manifest4
-rw-r--r--sci-libs/matio/Manifest2
-rw-r--r--sci-libs/mesquite/Manifest2
-rw-r--r--sci-libs/ni-visa/Manifest2
-rw-r--r--sci-libs/oasa/Manifest2
-rw-r--r--sci-libs/omalloc/Manifest2
-rw-r--r--sci-libs/symmetrica/Manifest2
-rw-r--r--sci-libs/trilinos/Manifest1
-rw-r--r--sci-libs/trilinos/metadata.xml56
-rw-r--r--sci-mathematics/Oid/Manifest4
-rw-r--r--sci-mathematics/acl2/Manifest2
-rw-r--r--sci-mathematics/apron/Manifest5
-rw-r--r--sci-mathematics/aribas/Manifest2
-rw-r--r--sci-mathematics/axiom/Manifest2
-rw-r--r--sci-mathematics/burrtools/Manifest4
-rw-r--r--sci-mathematics/dolfin/Manifest2
-rw-r--r--sci-mathematics/frama-c/Manifest3
-rw-r--r--sci-mathematics/gap-guava/Manifest2
-rw-r--r--sci-mathematics/gap/Manifest4
-rw-r--r--sci-mathematics/gappa/Manifest3
-rw-r--r--sci-mathematics/htk/Manifest4
-rw-r--r--sci-mathematics/kayali/Manifest2
-rw-r--r--sci-mathematics/libsfmt/Manifest2
-rw-r--r--sci-mathematics/lie/Manifest2
-rw-r--r--sci-mathematics/ltl2ba/Manifest25
-rw-r--r--sci-mathematics/netgen/Manifest2
-rw-r--r--sci-mathematics/open-axiom/Manifest2
-rw-r--r--sci-mathematics/pest/Manifest6
-rw-r--r--sci-mathematics/ufc/Manifest2
-rw-r--r--sci-misc/finomaton/Manifest2
-rw-r--r--sci-misc/fitscut/Manifest2
-rw-r--r--sci-misc/jwnl/Manifest4
-rw-r--r--sci-misc/kotus-sanalista/Manifest2
-rw-r--r--sci-misc/nltk/Manifest2
-rw-r--r--sci-misc/omorfi/Manifest2
-rw-r--r--sci-misc/opennlp-maxent/Manifest2
-rw-r--r--sci-misc/opennlp-tools/Manifest88
-rw-r--r--sci-misc/pywordnet/Manifest2
-rw-r--r--sci-misc/salome-kernel/Manifest4
-rw-r--r--sci-misc/salome-pycalculator/Manifest4
-rw-r--r--sci-misc/stanford-parser/Manifest2
-rw-r--r--sci-misc/stanford-tagger/Manifest2
-rw-r--r--sci-physics/qcl/Manifest8
-rw-r--r--sci-visualization/nodemon/Manifest2
-rw-r--r--sys-cluster/ganglia_jobmonarch/Manifest2
-rw-r--r--sys-cluster/nullmpi/Manifest2
-rw-r--r--sys-cluster/pyslice/Manifest2
-rw-r--r--sys-devel/gdebugger/Manifest4
-rw-r--r--sys-infiniband/librxe/Manifest2
-rw-r--r--x11-libs/tr/Manifest2
213 files changed, 331 insertions, 393 deletions
diff --git a/app-doc/blacs-docs/Manifest b/app-doc/blacs-docs/Manifest
index b886ce644..0bacd4799 100644
--- a/app-doc/blacs-docs/Manifest
+++ b/app-doc/blacs-docs/Manifest
@@ -1 +1 @@
-DIST blacs-docs-1.1.tar.bz2 150345 RMD160 4909da85c7971d640184a62610ff9200ee750c95 SHA1 5ba30ed1f22a89ac03f3f103e03f3b969931e1c4 SHA256 6739d4b789d341ef1116a53e4f2750e8a8b3077dfd79b9d8e7b3c92d66001381
+DIST blacs-docs-1.1.tar.bz2 150345 SHA256 6739d4b789d341ef1116a53e4f2750e8a8b3077dfd79b9d8e7b3c92d66001381
diff --git a/app-doc/blas-docs/Manifest b/app-doc/blas-docs/Manifest
index 463927240..bd0600d25 100644
--- a/app-doc/blas-docs/Manifest
+++ b/app-doc/blas-docs/Manifest
@@ -1,3 +1,3 @@
-DIST blas-report.pdf 2412966 RMD160 47165da27bbb97d3746869869a69124f728f695e SHA1 577478f5013464e68b9596ad854d1d9ebd69a8cc SHA256 7874962ae4dc753fcdd483ff0c69931227846632251f79a68f4f879348f321a6
-DIST blasqr.pdf 97443 RMD160 95b0a2466430021e29a02f3d48142daeb643f922 SHA1 601b18bb8fadd413f913581f5d087b64f5a81dbe SHA256 5ec151929a3cc2cf4589d414f82b7138169bbe2c72fa9b898dfd911f2c555bfd
-DIST lapack-man-3.3.tar.gz 1066170 RMD160 4ee4b63f6964e318a0e332dbc676bf336a083174 SHA1 94ff7b035389de0a052fd53c3b045dc46ee23cef SHA256 63055ba24cfc0fdef8bce53978c73f216fb505aa2144391382f85d3245fd085a
+DIST blas-report.pdf 2412966 SHA256 7874962ae4dc753fcdd483ff0c69931227846632251f79a68f4f879348f321a6
+DIST blasqr.pdf 97443 SHA256 5ec151929a3cc2cf4589d414f82b7138169bbe2c72fa9b898dfd911f2c555bfd
+DIST lapack-man-3.3.tar.gz 1066170 SHA256 63055ba24cfc0fdef8bce53978c73f216fb505aa2144391382f85d3245fd085a
diff --git a/app-doc/lapack-docs/Manifest b/app-doc/lapack-docs/Manifest
index b9af565cf..7a264aa4d 100644
--- a/app-doc/lapack-docs/Manifest
+++ b/app-doc/lapack-docs/Manifest
@@ -1,2 +1,2 @@
-DIST lapack-man-3.3.tar.gz 1066170 RMD160 4ee4b63f6964e318a0e332dbc676bf336a083174 SHA1 94ff7b035389de0a052fd53c3b045dc46ee23cef SHA256 63055ba24cfc0fdef8bce53978c73f216fb505aa2144391382f85d3245fd085a
-DIST lapackqref.ps 72345 RMD160 5f9c94dccd6ed7dd6b5fbf03ce0c9008695f60ed SHA1 d552e8d06b18df797f7b8bb14c346eb6303ae9f5 SHA256 fafadde0c1804cc0ab6d9435d41239745d8e265299773ede827c82596bbcef4b
+DIST lapack-man-3.3.tar.gz 1066170 SHA256 63055ba24cfc0fdef8bce53978c73f216fb505aa2144391382f85d3245fd085a
+DIST lapackqref.ps 72345 SHA256 fafadde0c1804cc0ab6d9435d41239745d8e265299773ede827c82596bbcef4b
diff --git a/app-doc/root-docs/Manifest b/app-doc/root-docs/Manifest
index d4f30f8d6..9f96491bc 100644
--- a/app-doc/root-docs/Manifest
+++ b/app-doc/root-docs/Manifest
@@ -1,6 +1 @@
-AUX root-docs-5.34.01-makehtml.patch 1393 SHA256 6fd2edf1956e3929a063f9e7add1893d873eed21b56bb4d872f4c7beb60ebce5 SHA512 6ed68056585e12295d06c0d7e77fe90403214f15b889628a32fa27b9a845a7ccdabe027d962e381f786d5ad0210173b0227a8756487d809b0e60772cd6b74820 WHIRLPOOL d27abe4585b9772f4c5f3b03f1c04a7a1ac49e09ea59df85e5dbd47622a831503d18615d80f947bef6923e420027e4db5073b1f34cd1d239fd5adfa92ebd193f
DIST root_v5.34.08.source.tar.gz 66508773 SHA256 79228cbe5fdfce0ab861b3cba48263d841f0ed04aaf721fb82e246aa567e4011 SHA512 2731b282f45d7a6462ec011ff773224df60fb55140c60f7685afbcd86eec2debbc76fac631fa5e87b3b7893417d8e51a3794c3e017b76dac8206188fb1e0b33f WHIRLPOOL 889ecc8cf5f27e9887c28367645fde8e621a2045a646b4308d132b6a63ca9e138e0718207f265696a146c9e47122384afbcf690bd02e59ba5880b69267502c21
-EBUILD root-docs-5.34.08.ebuild 2237 SHA256 61f9b6d1b1b3991742326f8204870e774e1d844215e9c506422b52ff68d79e7e SHA512 9c3aac037e6eee4402da2821a6c8e5f1c40831101761771f438378922f24504a3ead443edca5462e758fd8815523f9daa0146c10f08e52b37206a57442d0cfd3 WHIRLPOOL 0b573c55d72325bc5ef1d87368a68e99c1fe35e6332397916c77748b7039e2813aa480536424dd872d782e89facdd192383c7fa62eee6038d509a2d1a345eb46
-EBUILD root-docs-9999.ebuild 2732 SHA256 1cc30c22c110fdd8fca709c73094dd561279ec650427c0b2774d37e188da766c SHA512 f7b6f0599d84f5fb956629f4692e37be6b59c4c8882220ae0c6ed65aea8ad4ae1a0bffce94de3918cce2c9342bee62868c5889e9eb8ac16bd76e494a8ece3fe6 WHIRLPOOL 1542a46a9e2c1e033bdce6e6f6e3fcdea4910f5f4b6d4c2cc257d8a04965fc38946211ce5feef36fc3c3036a8db6962284d243da599897690e2d0b37be693811
-MISC ChangeLog 2964 SHA256 f3b0e673686f71371043e50ca1b3c87ebc61d4e8d366d9d3d600cc4ccdb24da7 SHA512 b37dcf5b7044a7d3a5883978b7b37488808fe7ffb830a6437ed91c61cb2cad6852de6f8725ec46bc1789da51c8fba7783e507cd3d3265440d217492bc31a2584 WHIRLPOOL e856b8a194131af3f3cf96ad605284888bbb60d5d05c354e86e67d0bd5ccba27c29ae2d6fecd17c5b79aedc992d0e91a80800a06c5fe708f04f070783cceb4b1
-MISC metadata.xml 445 SHA256 00cd4d82a3a02cc4a2ac6dc347b57713f3772635f9be6987d05bb024ad9f3b72 SHA512 2793492437598485f4fc5542e3bc22e38ed5c9d598c1964cb952ce3ca89b796d126d482210b35f7d1d4e52d8c0cbf639df3652343d0f57036656ee70ceba29e1 WHIRLPOOL a072d60953083f1c24dca44c988104a86664b8380810ea63990494dd1decb2dd993ffadbc28159c2194c8e84841082946c0c593ea0e67ec823790bfdcf6a208c
diff --git a/app-text/dgs/Manifest b/app-text/dgs/Manifest
index c67ae1666..9ee1c7549 100644
--- a/app-text/dgs/Manifest
+++ b/app-text/dgs/Manifest
@@ -1 +1 @@
-DIST dgs-0.5.10.tar.gz 3572504 RMD160 4538e098ad4fab1ff4e1f483838fd3dd9515cd5c SHA1 94c35dbbf596dd35d47205cdde628457d95df084 SHA256 b01f21609241414fe92d8838e63150bfd7359d74ce05dfa38d2798e9d0f8a0ff
+DIST dgs-0.5.10.tar.gz 3572504 SHA256 b01f21609241414fe92d8838e63150bfd7359d74ce05dfa38d2798e9d0f8a0ff
diff --git a/app-vim/freefem++-syntax/Manifest b/app-vim/freefem++-syntax/Manifest
index 155d1578b..78752a6b1 100644
--- a/app-vim/freefem++-syntax/Manifest
+++ b/app-vim/freefem++-syntax/Manifest
@@ -1 +1 @@
-DIST freefem++-syntax-20081108.tar.gz 1108 RMD160 02c947dae0495de4b2ad1a49d7bdee8d2f4f21c0 SHA1 d0c718a41623d5b5897e97deed2acb5fa35b06a9 SHA256 1bad9e9150ca754695669dbc892c14a678062353a59ce648cc9a35650f014eff
+DIST freefem++-syntax-20081108.tar.gz 1108 SHA256 1bad9e9150ca754695669dbc892c14a678062353a59ce648cc9a35650f014eff
diff --git a/dev-cpp/growler-arch/Manifest b/dev-cpp/growler-arch/Manifest
index 88f307259..1fc37cebf 100644
--- a/dev-cpp/growler-arch/Manifest
+++ b/dev-cpp/growler-arch/Manifest
@@ -1,2 +1,2 @@
-DIST growler-arch-0.3.7.1.tar.gz 500709 RMD160 75eab31464ed4de9125f7dac6b2946d918c7b15a SHA1 c5b50bd795ea788f00ccc68e9a65cfa31eaa5c3f SHA256 36b53a1ac6eb4602c4a20b430c9f81db3e6ed442d7df1ea35f636367eb29f634
-DIST growler-arch-0.3.7.tar.gz 504380 RMD160 ca3abbece08e78c623c72dfbd183d47e2a9a1f35 SHA1 765e05c62f186a1841d3872ba1316186a46eb21e SHA256 2b6804b32b32c7cd73b68fcd399139faf58522e68ed11cf91340f4a4152537e4
+DIST growler-arch-0.3.7.1.tar.gz 500709 SHA256 36b53a1ac6eb4602c4a20b430c9f81db3e6ed442d7df1ea35f636367eb29f634
+DIST growler-arch-0.3.7.tar.gz 504380 SHA256 2b6804b32b32c7cd73b68fcd399139faf58522e68ed11cf91340f4a4152537e4
diff --git a/dev-cpp/growler-core/Manifest b/dev-cpp/growler-core/Manifest
index 6770b5cc9..70b6c420e 100644
--- a/dev-cpp/growler-core/Manifest
+++ b/dev-cpp/growler-core/Manifest
@@ -1 +1 @@
-DIST growler-core-0.3.7.tar.gz 271855 RMD160 b488a484710ed8d51e7b715c8b768b16aaa18ea6 SHA1 c4b5204fece1c410c0d3f1a9a74a5eb655599a6b SHA256 f71b42d657276590538f9f737bb97b4a0a625987e37d3d2584d4d137fefbcae9
+DIST growler-core-0.3.7.tar.gz 271855 SHA256 f71b42d657276590538f9f737bb97b4a0a625987e37d3d2584d4d137fefbcae9
diff --git a/dev-cpp/growler-math/Manifest b/dev-cpp/growler-math/Manifest
index 4266f05ed..e00853738 100644
--- a/dev-cpp/growler-math/Manifest
+++ b/dev-cpp/growler-math/Manifest
@@ -1 +1 @@
-DIST growler-math-0.3.4.1.tar.gz 178883 RMD160 961c086126a015cce4376250e1ccb8dcccbc664c SHA1 78012b37e10b2c1069e0d185c8c1ffb4184c7a3f SHA256 ba578c958fab839a668ac8c00c27b5724ef5e0fd4e0e65bb45ef74d7603c4163
+DIST growler-math-0.3.4.1.tar.gz 178883 SHA256 ba578c958fab839a668ac8c00c27b5724ef5e0fd4e0e65bb45ef74d7603c4163
diff --git a/dev-cpp/growler-thread/Manifest b/dev-cpp/growler-thread/Manifest
index ee299528e..0074a2bc3 100644
--- a/dev-cpp/growler-thread/Manifest
+++ b/dev-cpp/growler-thread/Manifest
@@ -1 +1 @@
-DIST growler-thread-0.3.4.tar.gz 183150 RMD160 fcae2988a68af50b3bda0982658ad301eb990f8e SHA1 96697ae8931427cc8b47717e1d43199359fade3d SHA256 9749203246608dca2172d80a11a54ff80846f909b54e9f0fdea960413fdd11ca
+DIST growler-thread-0.3.4.tar.gz 183150 SHA256 9749203246608dca2172d80a11a54ff80846f909b54e9f0fdea960413fdd11ca
diff --git a/dev-java/jeuclid-core/Manifest b/dev-java/jeuclid-core/Manifest
index 1b1708318..57cdc53f7 100644
--- a/dev-java/jeuclid-core/Manifest
+++ b/dev-java/jeuclid-core/Manifest
@@ -1,2 +1,2 @@
-DIST jeuclid-parent-3.1.8-src.zip 8844588 RMD160 4f7a6f2fc5acd3bba23c0aa715798140dda17836 SHA1 02647c735f620e194e2177d779c16ca027e7b674 SHA256 4c80740a78bef42c6e5b87e09df931448caa210469382270ac4f70016ac21a0c
+DIST jeuclid-parent-3.1.8-src.zip 8844588 SHA256 4c80740a78bef42c6e5b87e09df931448caa210469382270ac4f70016ac21a0c
DIST jeuclid-parent-3.1.9-src.zip 8858746 SHA256 80bddad60c02bb55d430cab78818c3a43223877c62bc71f1c7326e2ff8fbe362 SHA512 ae55ffa469664abbf5545479d7968fd36e003ccc3f21687a43e79d843d6d3855b779ebeca3d38cc0c4a466c2de21bffce8e7d14cb2199f57e125b58ac100f203 WHIRLPOOL 610e7dad58bece09eb1b0caec06de1c9afbb8bfaa9639c78c30b64b60d17029c8ed8d58c96b89d8f395a8fcab2025d274e781ed4b3dcb7ba7ed738375f299e88
diff --git a/dev-java/joda-convert/Manifest b/dev-java/joda-convert/Manifest
index 999f68a80..5cc6d7868 100644
--- a/dev-java/joda-convert/Manifest
+++ b/dev-java/joda-convert/Manifest
@@ -1 +1 @@
-DIST joda-convert-1.2-dist.tar.gz 124723 RMD160 2f61428bea55f81de17afd336152da628faf5098 SHA1 3ae99c3b0f8090e2232b4879b8225affe17bcb4d SHA256 510e15e9174a33af6bf8f52b4f24c14a2b02afdf8808cdb969bc18c3092b3fff SHA512 841b38558ee6a4ae4f781d2bef3720efa4a87fa001c3c9b4fda2cd8a3cc332c2bf2e91fa8ab8675d5b06d5c5368ea0634542c7bedee977f89b39731082dd4ab3 WHIRLPOOL b71db44ea79d3f0e6cca05f1f962b8391b25a06ccfb6ecb738d6cbcb6bb150b847540fcc4bb82fbff876838d622f989450c027cce63de391809a9125b1a7d796
+DIST joda-convert-1.2-dist.tar.gz 124723 SHA256 510e15e9174a33af6bf8f52b4f24c14a2b02afdf8808cdb969bc18c3092b3fff SHA512 841b38558ee6a4ae4f781d2bef3720efa4a87fa001c3c9b4fda2cd8a3cc332c2bf2e91fa8ab8675d5b06d5c5368ea0634542c7bedee977f89b39731082dd4ab3 WHIRLPOOL b71db44ea79d3f0e6cca05f1f962b8391b25a06ccfb6ecb738d6cbcb6bb150b847540fcc4bb82fbff876838d622f989450c027cce63de391809a9125b1a7d796
diff --git a/dev-java/vecmath/Manifest b/dev-java/vecmath/Manifest
index 0f082bf63..b66656b4d 100644
--- a/dev-java/vecmath/Manifest
+++ b/dev-java/vecmath/Manifest
@@ -1,2 +1,2 @@
-DIST vecmath-1.5.1.tar.bz2 84987 RMD160 1ac06bab39f1ce7653be7311f2260100b781a069 SHA1 717326053d8f295050e517b6457f463b253fa10e SHA256 a279917d9431f920b0061906adca97ff0d0fbbe73699e5abb437fad3402d159d
-DIST vecmath-test-1.5.1.tar.bz2 8460 RMD160 6da2aac17e7df2d383d2ac63da0773b3a84d23d9 SHA1 3dca2cb70a0378cb59825094b0f06afc505a850f SHA256 f34c862d7f4e5164a43c5287afb5afa21aa40cc701ef6b302ead47c082ec29f4
+DIST vecmath-1.5.1.tar.bz2 84987 SHA256 a279917d9431f920b0061906adca97ff0d0fbbe73699e5abb437fad3402d159d
+DIST vecmath-test-1.5.1.tar.bz2 8460 SHA256 f34c862d7f4e5164a43c5287afb5afa21aa40cc701ef6b302ead47c082ec29f4
diff --git a/dev-libs/libunzip/Manifest b/dev-libs/libunzip/Manifest
index 84d2dea7a..a3200e1c4 100644
--- a/dev-libs/libunzip/Manifest
+++ b/dev-libs/libunzip/Manifest
@@ -1 +1 @@
-DIST unzip552.tar.gz 1140291 RMD160 b749b0923bc4cceaa6f937aef688e9713a84328c SHA1 1831bd59b9e607a69052f83b263384895e2d4a19 SHA256 145d95e2ef1ef9add2e3c97d1340907e33ab8749eb1235372e7f0b7af600a8e9
+DIST unzip552.tar.gz 1140291 SHA256 145d95e2ef1ef9add2e3c97d1340907e33ab8749eb1235372e7f0b7af600a8e9
diff --git a/dev-libs/simclist/Manifest b/dev-libs/simclist/Manifest
index 7273b4649..edd77050a 100644
--- a/dev-libs/simclist/Manifest
+++ b/dev-libs/simclist/Manifest
@@ -1,4 +1 @@
-DIST simclist-1.6.tar.bz2 44280 RMD160 718f83722d38e871bd46eb9bfdaed8c2de12d31f SHA1 f4269a11b1b656f787600291da931846b1fd4323 SHA256 63b47211215466ddfba1643582cb3aaa7b5e9ca1cc5f247290e3199c4e29f147
-EBUILD simclist-1.6.ebuild 827 RMD160 c7421860f6f7ec04898ca61806b771f6b4ae90a6 SHA1 99fdb8406ca0682675935966221f4154076045b0 SHA256 dafebf9097b8ee349782c2700e2cc6a88245338e74e825ba9b8a5d90c3ec062a
-MISC ChangeLog 575 RMD160 b387f0ea13853d9658d951d52c8927edb34e98da SHA1 4a76dbaeb442efcd00023cdb179ec13dd911a717 SHA256 4f3199e4965a420e5c34cf42b02eb1be4c6892ee06adbcdc6a7246f9c69eba1d
-MISC metadata.xml 535 RMD160 5a7d1e06505324dd8d496acdd4d4f0636249af3f SHA1 fb2b0647661f3162ed534dd40c061c7bac3545ee SHA256 cabdc9cb6f6bc4af60eb13a5bac8a914354fef222730840e051c42ab5f70bba0
+DIST simclist-1.6.tar.bz2 44280 SHA256 63b47211215466ddfba1643582cb3aaa7b5e9ca1cc5f247290e3199c4e29f147
diff --git a/dev-ml/mlgmpidl/Manifest b/dev-ml/mlgmpidl/Manifest
index 7f85a16b9..e3fb55977 100644
--- a/dev-ml/mlgmpidl/Manifest
+++ b/dev-ml/mlgmpidl/Manifest
@@ -1,5 +1 @@
-AUX mlgmpidl-1.1-mpfr-3_compat.patch 496 RMD160 87a9cad8c449643be14d1253905c4a0900738899 SHA1 0b8ad163c5698ae19f87bb6bb90b42972f48205d SHA256 d888a1ad0930895ef2ec83bef6eef5a39ed18a38aa3a637f33b61b9a20d19e2b
-DIST mlgmpidl-1.1.tgz 194002 RMD160 752c865e5355b40f9b3c9babf0c9c378cb3b4009 SHA1 ef26eaa215ccedbfc20c00614f702a06d3a70420 SHA256 8990a56f4c1ff701bb922bacf7f23b40539d123216ac5f9fe0f35967735d6fc9
-EBUILD mlgmpidl-1.1.ebuild 1316 RMD160 9d48e4db46ae774b56391b97c10dde88e509ee4c SHA1 1c7f4e95b22f21a3bdd506501924881899d88ad9 SHA256 4c6bdb666f9adf824d2a1e977f3066341283deaa9156a0f35a07e3c975185b2d
-MISC ChangeLog 380 RMD160 18bb9c76419ff5a522e95412b983357f0e7ebdad SHA1 c7ce6c23f0700f92089e1c8d2fd2a163578ba210 SHA256 4104e42798187a33dd54889b0c078ffa9bbe44203d19a982956ec9113c073330
-MISC metadata.xml 629 RMD160 e1be104bd63812ee41bb3dfee175e1605e582b15 SHA1 466cd3b727bceb9bdc0eb5dbc2e6dc9807c7ff69 SHA256 c430bdc6e03131ed1ce7f991f1ad0d9fd641be877a5bd089da1179fa8d10eb1a
+DIST mlgmpidl-1.1.tgz 194002 SHA256 8990a56f4c1ff701bb922bacf7f23b40539d123216ac5f9fe0f35967735d6fc9
diff --git a/dev-ml/ocamlgraph/Manifest b/dev-ml/ocamlgraph/Manifest
index ed508c33b..4b4f6d4f0 100644
--- a/dev-ml/ocamlgraph/Manifest
+++ b/dev-ml/ocamlgraph/Manifest
@@ -1,5 +1 @@
-AUX ocamlgraph-makefile.patch 1564 SHA256 c36612f740033a3d158f5d2a458697b1a41dacf2d1964484c1fd0c0f39fd276b SHA512 a0251220741069e729ffebdf7d9f2b3f02119dec48c09321cc9cbc8b82286d4081ccd89dbe5c1fe634ea415aa5e48d162f522ce6509812847dba2909c7572adb WHIRLPOOL 56765554649d5e5d38016ad22183b7b0d46c3780beeffb7f79d46c30e33967a3fd5f8ed92335dd8b5dd727743d25d8975c52d839817e276d13f595b25b7d82f4
DIST ocamlgraph-1.8.2.tar.gz 249253 SHA256 e54ae60cd977a032854166dad56348d0fb76c6cd8e03e960af455268f0c8b5a6 SHA512 93995dbacc571569a3f168ae141808ac5053ad895ad3ee4dddd311f1e5b3123a8096a5a4b4d10695b5c02d41efa15a92c425987836a5db6ef6469ef77cd23750 WHIRLPOOL 7d36a4b33fb1e981b5ae7b94627de918ad60610ecc8f364b1895593da98f78cfdb606325e862534ecdb9ef53b00de50d31df1e67a5e4fa5325327d8d1e4588a8
-EBUILD ocamlgraph-1.8.2.ebuild 946 SHA256 2919c6ffc00397244c5777b6a5f94faa47c45f6f17c766dafc13c3cd4a826360 SHA512 7b8efb7a1410a6462e7675cad6c5f88982b7960f162a6cde2093580b2b9465ee6c5ee0d5a5c3597f5355928fe56707c444e3a4f48bcb721b01e2abff4435bbb6 WHIRLPOOL 0c215ccc899d3d37d49c82df9decb86844e0eba1b3a3ad61a76cb4a977a016ce68423afd0549d7f112a36d20530c577031997493669aee0587ea0a2e6d982cb3
-MISC ChangeLog 955 SHA256 60645a4b4aa877f1d8671e90abc176ecdd9bc0293a4d0767fa16ff0f7348a409 SHA512 59d847ee340dad3aef86882d34dd3d52515ea6494ba892ba959a092132403d53edb9aea478fb28e5c8d5f7ba2bb374ee2bf1ddbafb17ab6e0b2588a912b10b41 WHIRLPOOL a3319a6c332592ebe46ace36a32180aaca48453f47584d9286f99135604823a82bb92bedae8f131e8cbe6fc6ce35f182906d90cd95bbb8d550d34313735b6011
-MISC metadata.xml 1550 SHA256 cf29ffe695398a61363b2f993b7e904ae259447488f14e072f77a098798ed1e0 SHA512 a824c62089e03b1c8936930100b893b25706cbcb5747e218d72120332e14597f2823ac1da64b59a62637d66295679202eb7142867145e2ae28b0667492587103 WHIRLPOOL a91552ca140d206fb80768b25999f38047e8a82904a949c724ba188c8682222709dd9cb3ec3b662c8573b568a97d64e3a64b4dfeb415d212ab6d94209b0f6a78
diff --git a/dev-perl/BTLib/Manifest b/dev-perl/BTLib/Manifest
index 50078c7ec..bc6e2be70 100644
--- a/dev-perl/BTLib/Manifest
+++ b/dev-perl/BTLib/Manifest
@@ -1 +1 @@
-DIST BTLib-0.19.tar.gz 36283 RMD160 14ae4a24c81a381e9a75ddcde7552a1f9dc301b8 SHA1 7a0545cb64976ee61e76a80a9ee1a87eb1747078 SHA256 0acd6446031222b8fd5bd11eb3ec6c3164bc50491feef765c052689d9c3ee302
+DIST BTLib-0.19.tar.gz 36283 SHA256 0acd6446031222b8fd5bd11eb3ec6c3164bc50491feef765c052689d9c3ee302
diff --git a/dev-perl/Lab-Instrument/Manifest b/dev-perl/Lab-Instrument/Manifest
index bab7ed056..28dedf0c0 100644
--- a/dev-perl/Lab-Instrument/Manifest
+++ b/dev-perl/Lab-Instrument/Manifest
@@ -1 +1 @@
-DIST Lab-Instrument-2.01.tar.gz 46901 RMD160 c7ef1cadc02f4a988946cd3452ee6e53f3a4bcce SHA1 223a41a316e652576caebe245f472c48b12e492e SHA256 1d772058fa45e5c6a3c63be598957aa9de46b1e0ae3d54564e5e2602f15b5379
+DIST Lab-Instrument-2.01.tar.gz 46901 SHA256 1d772058fa45e5c6a3c63be598957aa9de46b1e0ae3d54564e5e2602f15b5379
diff --git a/dev-perl/Lab-Tools/Manifest b/dev-perl/Lab-Tools/Manifest
index 2a7d24eb9..72b50d91a 100644
--- a/dev-perl/Lab-Tools/Manifest
+++ b/dev-perl/Lab-Tools/Manifest
@@ -1 +1 @@
-DIST Lab-Tools-1.4.tar.gz 23609 RMD160 6da9f8c136f8201bdc02e79b4b6812662bb76ab1 SHA1 0818f60c346b0662fe2f357533a2d127eed65677 SHA256 eeff55177c951dc9805fcdef467bd5c35ed6b56ea1fae3e9493aee5c4ae7b290
+DIST Lab-Tools-1.4.tar.gz 23609 SHA256 eeff55177c951dc9805fcdef467bd5c35ed6b56ea1fae3e9493aee5c4ae7b290
diff --git a/dev-perl/Lab-VISA/Manifest b/dev-perl/Lab-VISA/Manifest
index be3b7a14d..5ef4dcffa 100644
--- a/dev-perl/Lab-VISA/Manifest
+++ b/dev-perl/Lab-VISA/Manifest
@@ -1 +1 @@
-DIST Lab-VISA-2.06.tar.gz 121217 RMD160 1836eff8b7a524182a80341e42107bdf18f58f2c SHA1 7206bbf693ea88a7fb96bcf5bca0226dee468819 SHA256 b945dbe147681a7afce1d277a27d7954135d818321b55f1217631df37c43bc2d
+DIST Lab-VISA-2.06.tar.gz 121217 SHA256 b945dbe147681a7afce1d277a27d7954135d818321b55f1217631df37c43bc2d
diff --git a/dev-perl/go-db-perl/Manifest b/dev-perl/go-db-perl/Manifest
index f24fe0730..260485b09 100644
--- a/dev-perl/go-db-perl/Manifest
+++ b/dev-perl/go-db-perl/Manifest
@@ -1 +1 @@
-DIST go-db-perl-0.04.tar.gz 512925 RMD160 3bd39c1600ea2a998851db434c953ada3cfcac8d SHA1 e4cbd7f7b6979402475d2ff72307e468d2c05477 SHA256 8eb73d591ad767e7cf26def40cffd84833875f1ad51e456960b9ed73dc23641b
+DIST go-db-perl-0.04.tar.gz 512925 SHA256 8eb73d591ad767e7cf26def40cffd84833875f1ad51e456960b9ed73dc23641b
diff --git a/dev-perl/opal-client/Manifest b/dev-perl/opal-client/Manifest
index 928f3cfb1..2ca044922 100644
--- a/dev-perl/opal-client/Manifest
+++ b/dev-perl/opal-client/Manifest
@@ -1 +1 @@
-DIST opal-perl-1.9.2.tar.gz 90429 RMD160 61a90b4154b846bea9adbc0d08800e6237b3585f SHA1 195f89d465cb430004210e7a76c0712798b2d97b SHA256 8ca385b66326f0dea53bd60d5169e862008b347fb2081098345004fe1d05fd75
+DIST opal-perl-1.9.2.tar.gz 90429 SHA256 8ca385b66326f0dea53bd60d5169e862008b347fb2081098345004fe1d05fd75
diff --git a/dev-python/instant/Manifest b/dev-python/instant/Manifest
index cdc7a12e2..7f4363468 100644
--- a/dev-python/instant/Manifest
+++ b/dev-python/instant/Manifest
@@ -1 +1 @@
-DIST instant-0.9.8.tar.gz 112271 RMD160 e01817f836ff2c4d4eabad3c9286463f82337b79 SHA1 7604620103253e6fd035514c8bb86be7ac277828 SHA256 99286b1147f3eebf0e8a56501cfebbbd335bf0cd98cfba7f60f8d5c17005d896
+DIST instant-0.9.8.tar.gz 112271 SHA256 99286b1147f3eebf0e8a56501cfebbbd335bf0cd98cfba7f60f8d5c17005d896
diff --git a/dev-python/meshpy/Manifest b/dev-python/meshpy/Manifest
index 3222b2c6e..78a309b85 100644
--- a/dev-python/meshpy/Manifest
+++ b/dev-python/meshpy/Manifest
@@ -1 +1 @@
-DIST MeshPy-0.91.2.tar.gz 460056 RMD160 b1148a7277194866e2df40f50d832c9252eb0ce8 SHA1 a3a244fa74a7a707fe97aa2cd6b7f35bf7762cc3 SHA256 d971a99d6d7cae85b48718ab824dba4fab6fce9951ff1e4d07d366d1129c4274
+DIST MeshPy-0.91.2.tar.gz 460056 SHA256 d971a99d6d7cae85b48718ab824dba4fab6fce9951ff1e4d07d366d1129c4274
diff --git a/dev-python/numpydoc/Manifest b/dev-python/numpydoc/Manifest
index 3bf42ca02..431bedb58 100644
--- a/dev-python/numpydoc/Manifest
+++ b/dev-python/numpydoc/Manifest
@@ -1 +1 @@
-DIST numpydoc-0.4.tar.gz 28972 RMD160 0eeec5a3570f1d0ea0a2f0090b85e79a96f0cfb9 SHA1 543c78a049a3ee6ab5fe8f85a178c257b20dd0d4 SHA256 20e07c60766a7a044f228de5bdcc0d10b84a9f0b460e0c09422a4f60ef21ff8f
+DIST numpydoc-0.4.tar.gz 28972 SHA256 20e07c60766a7a044f228de5bdcc0d10b84a9f0b460e0c09422a4f60ef21ff8f
diff --git a/dev-python/omniorbpy/Manifest b/dev-python/omniorbpy/Manifest
index d26f14f82..495f08407 100644
--- a/dev-python/omniorbpy/Manifest
+++ b/dev-python/omniorbpy/Manifest
@@ -1 +1 @@
-DIST omniORBpy-3.4.tar.gz 721891 RMD160 5b389a31907510800ef0913e2e3855038e6a4cf9 SHA1 e598bd25289d0a2a09da4c7241513202c8b9adb4 SHA256 c786676f5d76082bbe6a4031aed1a08b45345d75c0b5aacc4cdc26b69fb9c782
+DIST omniORBpy-3.4.tar.gz 721891 SHA256 c786676f5d76082bbe6a4031aed1a08b45345d75c0b5aacc4cdc26b69fb9c782
diff --git a/dev-python/opal-client/Manifest b/dev-python/opal-client/Manifest
index c2bdee3e0..45e1445b1 100644
--- a/dev-python/opal-client/Manifest
+++ b/dev-python/opal-client/Manifest
@@ -1 +1 @@
-DIST opal-py-2.2.tar.gz 1012870 RMD160 d3664f05c67d1c4bf35ae026b2f0bedc85dc29ac SHA1 c3152fcfcd86f10f145bb4aedec8b53776615a65 SHA256 d11588ed29dac2812b4293204e0f0d75ba3b765f31af095e0e6333365afe0b47
+DIST opal-py-2.2.tar.gz 1012870 SHA256 d11588ed29dac2812b4293204e0f0d75ba3b765f31af095e0e6333365afe0b47
diff --git a/dev-python/pyhdf/Manifest b/dev-python/pyhdf/Manifest
index 1addb9e15..4fc20fe78 100644
--- a/dev-python/pyhdf/Manifest
+++ b/dev-python/pyhdf/Manifest
@@ -1 +1 @@
-DIST pyhdf-0.8.3.tar.gz 346412 RMD160 60c0cda95ca5c8b6205cc89078733717fe00e3b4 SHA1 fd7c068b25105e829a2bdffcf0c916e3ad9f943e SHA256 7f2817b5459296174dfcdb24d9d9f6d1066efd9051a6983fdceb70a9beda5a4b SHA512 d6a23930210dd25380454af96cb0caa15473a13979824276de4c7a477d6f9aaae78af5d566d72cb359a50ac98b306fa8dffe38db0063e43a8384593d10c264d3 WHIRLPOOL 3eaa0a843a28414882d9e979798094e39517daccc67a85345e79586421367cdd852da21ee9ea3cf50a4ac57b740aa430ccb55d17684feeeba3fd1abbbcad768d
+DIST pyhdf-0.8.3.tar.gz 346412 SHA256 7f2817b5459296174dfcdb24d9d9f6d1066efd9051a6983fdceb70a9beda5a4b SHA512 d6a23930210dd25380454af96cb0caa15473a13979824276de4c7a477d6f9aaae78af5d566d72cb359a50ac98b306fa8dffe38db0063e43a8384593d10c264d3 WHIRLPOOL 3eaa0a843a28414882d9e979798094e39517daccc67a85345e79586421367cdd852da21ee9ea3cf50a4ac57b740aa430ccb55d17684feeeba3fd1abbbcad768d
diff --git a/dev-python/pythoncgns/Manifest b/dev-python/pythoncgns/Manifest
index fd32286ea..4ad5f4a1c 100644
--- a/dev-python/pythoncgns/Manifest
+++ b/dev-python/pythoncgns/Manifest
@@ -1 +1 @@
-DIST CGNS-2009.10.30.tar.gz 24185 RMD160 aac9c77f620797b5658bde863105d43a8b22e8c3 SHA1 660a0097031474bb939254359b67b44f8bb93805 SHA256 915c57cfbcaceecf8c352de03e96945388c1bd1e10c4b011ea5ac5231814011a
+DIST CGNS-2009.10.30.tar.gz 24185 SHA256 915c57cfbcaceecf8c352de03e96945388c1bd1e10c4b011ea5ac5231814011a
diff --git a/dev-python/ufl/Manifest b/dev-python/ufl/Manifest
index 84b907b5f..d75038156 100644
--- a/dev-python/ufl/Manifest
+++ b/dev-python/ufl/Manifest
@@ -1 +1 @@
-DIST ufl-0.5.4.tar.gz 204883 RMD160 7acd9b3883afb3d22a47cf2a4b913c24e9580328 SHA1 7a2f541f9f784014786e7b844aec3c92eb90b00a SHA256 fc032d7a011406764ca3c466d194cfcf7ba165292e1a9da471cde7519ce1a960
+DIST ufl-0.5.4.tar.gz 204883 SHA256 fc032d7a011406764ca3c466d194cfcf7ba165292e1a9da471cde7519ce1a960
diff --git a/dev-python/viper/Manifest b/dev-python/viper/Manifest
index 59816d1c6..5a4b064bf 100644
--- a/dev-python/viper/Manifest
+++ b/dev-python/viper/Manifest
@@ -1 +1 @@
-DIST viper-0.4.6.tar.gz 185997 RMD160 548adcb94db3ab1a1cd12ca1fa6f43c8cb3283b7 SHA1 3618763387c803f4b732eff9f9b1fa3ec54d04e9 SHA256 11a21044f9fcd02e50153e5d9895c41f39ef0dd57b5b074e5fe12923db37cf44
+DIST viper-0.4.6.tar.gz 185997 SHA256 11a21044f9fcd02e50153e5d9895c41f39ef0dd57b5b074e5fe12923db37cf44
diff --git a/dev-tcltk/togl/Manifest b/dev-tcltk/togl/Manifest
index 0f1965e8f..d3826792a 100644
--- a/dev-tcltk/togl/Manifest
+++ b/dev-tcltk/togl/Manifest
@@ -1 +1 @@
-DIST Togl-1.7.tar.gz 205532 RMD160 48efbcd465372db291c91a132b1f60e81b60b1ac SHA1 5f937e123df3edc9dd017bfd8da05c069c69f4dc SHA256 56b7580e3001cc4d334ff31bf6b9d730d05abb2faba7a3dbbc1c959ff7f7bcaf
+DIST Togl-1.7.tar.gz 205532 SHA256 56b7580e3001cc4d334ff31bf6b9d730d05abb2faba7a3dbbc1c959ff7f7bcaf
diff --git a/dev-util/smartgit/Manifest b/dev-util/smartgit/Manifest
index 80b2dbb99..f93af16e2 100644
--- a/dev-util/smartgit/Manifest
+++ b/dev-util/smartgit/Manifest
@@ -1 +1 @@
-DIST smartgit-generic-1_0_2.tar.gz 5641079 RMD160 01eaa9ffeea3c316618f6fe44e76a0e1e1f10a14 SHA1 ab7e822d867b7e28e5092ad56965ab76d1ccef5c SHA256 ec2fad2c9dc798cb29d5070e10bb4e369c6ff2f8a54ef1f181cc9258eaac0d6a
+DIST smartgit-generic-1_0_2.tar.gz 5641079 SHA256 ec2fad2c9dc798cb29d5070e10bb4e369c6ff2f8a54ef1f181cc9258eaac0d6a
diff --git a/media-libs/OpenMOIV/Manifest b/media-libs/OpenMOIV/Manifest
index 523226a28..952a10c0d 100644
--- a/media-libs/OpenMOIV/Manifest
+++ b/media-libs/OpenMOIV/Manifest
@@ -1 +1 @@
-DIST OpenMOIV.src.1.0.3a.tar.bz2 327168 RMD160 a5aa797458f87cd4dc0846c565e358577f094c31 SHA1 7af9fad07d57423c5c01ded9741d28bd5b92c337 SHA256 91c6b24aceb72d5884b0291ae28fca358a78e1590ccd0554ef7e7f8a3ef6dbe8
+DIST OpenMOIV.src.1.0.3a.tar.bz2 327168 SHA256 91c6b24aceb72d5884b0291ae28fca358a78e1590ccd0554ef7e7f8a3ef6dbe8
diff --git a/media-libs/avbin-bin/Manifest b/media-libs/avbin-bin/Manifest
index cb3720ff5..1f5730623 100644
--- a/media-libs/avbin-bin/Manifest
+++ b/media-libs/avbin-bin/Manifest
@@ -1,2 +1,2 @@
-DIST avbin-linux-x86-32-7.tar.gz 1499992 RMD160 259f6832638040ed91737c570efb5003a7125f5c SHA1 12da471567eeb6ba575b05b98d2988e764883300 SHA256 218b1f40d54762cd7ad4382faf0c5242a8c18def076b67bd308f62ac34560b2f
-DIST avbin-linux-x86-64-7.tar.gz 1509724 RMD160 eeeed45d09eec761e69190d37c1078fd52164486 SHA1 83014158e18ea2162ac4ebcebfc26e5060fa67d1 SHA256 d60dd48be45024360cf6fc1fa16110e14057ab5f971d35384a79f49ac156d3f2
+DIST avbin-linux-x86-32-7.tar.gz 1499992 SHA256 218b1f40d54762cd7ad4382faf0c5242a8c18def076b67bd308f62ac34560b2f
+DIST avbin-linux-x86-64-7.tar.gz 1509724 SHA256 d60dd48be45024360cf6fc1fa16110e14057ab5f971d35384a79f49ac156d3f2
diff --git a/media-libs/libgfx/Manifest b/media-libs/libgfx/Manifest
index 437564ac2..265c67304 100644
--- a/media-libs/libgfx/Manifest
+++ b/media-libs/libgfx/Manifest
@@ -1 +1 @@
-DIST libgfx-1.1.0.tar.gz 145470 RMD160 8c9a19bd5cd557ea029f7ad0a444983fbc9a084e SHA1 63bcca257e164ac77e6f0c9a6da5f7646c76d1bf SHA256 2bd53940c068c40125a8cfebcbd519c10c8630f8bdf4ebe9f57d328c74ad0284
+DIST libgfx-1.1.0.tar.gz 145470 SHA256 2bd53940c068c40125a8cfebcbd519c10c8630f8bdf4ebe9f57d328c74ad0284
diff --git a/net-firewall/gcb/Manifest b/net-firewall/gcb/Manifest
index 432457f65..7f31f18d4 100644
--- a/net-firewall/gcb/Manifest
+++ b/net-firewall/gcb/Manifest
@@ -1 +1 @@
-DIST gcb-1.5.6.tar.gz 1326341 RMD160 2cbdd3596ebb521d62e873a55c722c7c14165724 SHA1 229191a7924468ee453956f807b9d2b1ca26df35 SHA256 315ac4f325060d7df7ae03361d959151619cb308841207322cc2bd91193054bb
+DIST gcb-1.5.6.tar.gz 1326341 SHA256 315ac4f325060d7df7ae03361d959151619cb308841207322cc2bd91193054bb
diff --git a/net-ftp/bbftp-client/Manifest b/net-ftp/bbftp-client/Manifest
index 69a95db49..2b6fd0517 100644
--- a/net-ftp/bbftp-client/Manifest
+++ b/net-ftp/bbftp-client/Manifest
@@ -1 +1 @@
-DIST bbftp-client-3.2.0.tar.gz 233948 RMD160 9c11f6734bfa66667bb3aa690dbb3e661779e8b0 SHA1 90900c672f8b68b6b0bade3b6f66931722b6a2ae SHA256 b533de28f517671adad177532b6f4ae66c30e4ce3d2f558d1d7e6b172d96bcb6
+DIST bbftp-client-3.2.0.tar.gz 233948 SHA256 b533de28f517671adad177532b6f4ae66c30e4ce3d2f558d1d7e6b172d96bcb6
diff --git a/net-ftp/bbftp-server/Manifest b/net-ftp/bbftp-server/Manifest
index 49a77cdb9..1a3a9608b 100644
--- a/net-ftp/bbftp-server/Manifest
+++ b/net-ftp/bbftp-server/Manifest
@@ -1 +1 @@
-DIST bbftp-server-3.2.0.tar.gz 222600 RMD160 a6c8a79f8bf06dc7674331168a9bf705029edd12 SHA1 dc599051ed69093caaed029e1a0c28614f7f080d SHA256 04fbe472dc4c39f5b3e82520c08a084e8c4fd5301242c6bbb934d6984013b8ff
+DIST bbftp-server-3.2.0.tar.gz 222600 SHA256 04fbe472dc4c39f5b3e82520c08a084e8c4fd5301242c6bbb934d6984013b8ff
diff --git a/net-misc/bbscp/Manifest b/net-misc/bbscp/Manifest
index 004c723e5..6d7628035 100644
--- a/net-misc/bbscp/Manifest
+++ b/net-misc/bbscp/Manifest
@@ -1 +1 @@
-DIST bbscp-1.0.4.tar.gz 17411 RMD160 23f309b99e5fddecc5d82e7dc7db38c9f5f4187d SHA1 419cf864f6c3f54ec6a393be478ceb3a8198b77f SHA256 c3abb35f905d90b4db75be11cbbcd4fa9b89d674bc1430d5fbe8e71557ca9642
+DIST bbscp-1.0.4.tar.gz 17411 SHA256 c3abb35f905d90b4db75be11cbbcd4fa9b89d674bc1430d5fbe8e71557ca9642
diff --git a/perl-core/encoding-warnings/Manifest b/perl-core/encoding-warnings/Manifest
index 823d06215..e6a68002b 100644
--- a/perl-core/encoding-warnings/Manifest
+++ b/perl-core/encoding-warnings/Manifest
@@ -1 +1 @@
-DIST encoding-warnings-0.11.tar.gz 16110 RMD160 ba26a43222f7988d2ba5025d9ecdbb1112e9ca84 SHA1 c03e57cb0be7ed0186c80c663076e86a6933dbcb SHA256 67faf727b59ab1132d2b147bc1f927dc752897ce1f57b303efc46c3a969bf25e
+DIST encoding-warnings-0.11.tar.gz 16110 SHA256 67faf727b59ab1132d2b147bc1f927dc752897ce1f57b303efc46c3a969bf25e
diff --git a/sci-astronomy/astrometry/Manifest b/sci-astronomy/astrometry/Manifest
index baf804acd..cf5c75133 100644
--- a/sci-astronomy/astrometry/Manifest
+++ b/sci-astronomy/astrometry/Manifest
@@ -1 +1,2 @@
DIST astrometry.net-0.38.tar.bz2 4686209 SHA256 dd789637c5c6d2317097cbe1dd7e31e92c5383d984ba2ff2bd49ab1172181c28 SHA512 98172d5ebbf52140826411abe6da3f4739d455decdc876af754d07f477d17af1ab2cda62701f804e45239798b96fbe07b5d1c87ff491a88327c48019acb90c14 WHIRLPOOL 7d4f3f5a0d3553feef542b91812c39f51876928a0f687d8ec5b9c22bda51cae03afec07d91770909ffc1f14f0ec9174b7e9a518c619fb2674846fa44892edda2
+DIST astrometry.net-0.43.tar.bz2 6249755 SHA256 a9684be84e4e002188f6ba75d7dea7dbc28da9e3791e9fc774e9b9ae899dba92 SHA512 ae85912264ef0ebd6df110dd31c2c8efbfc34f3cc958ed4518ab715618be075495253d724e245011cdb1474333cdc9a73a6f3f0e74b85ca30c035dcf98f18502 WHIRLPOOL 22bd178582a8486e38073926a68d95429df1c4318b0cab57f3fb975912b91df0d5eb74a8a2c14cc13e2ea61de58018547f885e54f3e84ea2236c79ac8222dbd3
diff --git a/sci-astronomy/astrometry/files/0.38-system-libs.patch b/sci-astronomy/astrometry/files/0.38-system-libs.patch
index b16b8884a..eb206bd0c 100644
--- a/sci-astronomy/astrometry/files/0.38-system-libs.patch
+++ b/sci-astronomy/astrometry/files/0.38-system-libs.patch
@@ -44,5 +44,5 @@ diff -Nur astrometry.net-0.38.orig/util/makefile.gsl astrometry.net-0.38/util/ma
-.PHONY: $(REMAKE_GSL)
-$(REMAKE_GSL):
- cd $(GSL_DIR) && $(MAKE)
-+GSL_INC := $(shell pkg-config --cflags gs 2> /dev/null)
++GSL_INC := $(shell pkg-config --cflags gsl 2> /dev/null)
+GSL_LIB := $(shell pkg-config --libs gsl 2> /dev/null)
diff --git a/sci-biology/ONTO-PERL/Manifest b/sci-biology/ONTO-PERL/Manifest
index f10fe60bf..a462c2b88 100644
--- a/sci-biology/ONTO-PERL/Manifest
+++ b/sci-biology/ONTO-PERL/Manifest
@@ -1 +1 @@
-DIST ONTO-PERL-1.31.tar.gz 721117 RMD160 0253abe13b159578955aff5cd0b294ddc3c8c9ed SHA1 93147c710ab0c3e5d227c91ff22dea1de6d2c6fa SHA256 89a85cbe2f7ced1a394d863d9b6fbc54fae2cc8a3c2531fcaaebaf50489866b8
+DIST ONTO-PERL-1.31.tar.gz 721117 SHA256 89a85cbe2f7ced1a394d863d9b6fbc54fae2cc8a3c2531fcaaebaf50489866b8
diff --git a/sci-biology/align_to_scf/Manifest b/sci-biology/align_to_scf/Manifest
index 33e01a85a..f73a41a97 100644
--- a/sci-biology/align_to_scf/Manifest
+++ b/sci-biology/align_to_scf/Manifest
@@ -1 +1 @@
-DIST align_to_scf-1.06.tgz 25463 RMD160 1881affac69053fbc4677474451eed4a1d2c30f3 SHA1 6ec49824d30d1e892b257aba11d03f943c15663a SHA256 792d5023d02570cfb8510adb102ddacc3795ef5689e91c96e9e56b304ec70ddb
+DIST align_to_scf-1.06.tgz 25463 SHA256 792d5023d02570cfb8510adb102ddacc3795ef5689e91c96e9e56b304ec70ddb
diff --git a/sci-biology/amos-short/Manifest b/sci-biology/amos-short/Manifest
index a4d1d008c..24ac9e71e 100644
--- a/sci-biology/amos-short/Manifest
+++ b/sci-biology/amos-short/Manifest
@@ -1 +1 @@
-DIST AMOS-short.tgz 44462022 RMD160 b82f8f752c1557a293fe07e00e6c2c7a0ba5767a SHA1 d184ce8c9cd44855ae7142acd0357f8440dad46d SHA256 8ff3317dfd2b86aa7ed658408687b7a259b1517b8c43678b9379ad4ccb5ffdf8
+DIST AMOS-short.tgz 44462022 SHA256 8ff3317dfd2b86aa7ed658408687b7a259b1517b8c43678b9379ad4ccb5ffdf8
diff --git a/sci-biology/argo-bin/Manifest b/sci-biology/argo-bin/Manifest
index 68b214dfa..7cda4c55d 100644
--- a/sci-biology/argo-bin/Manifest
+++ b/sci-biology/argo-bin/Manifest
@@ -1 +1 @@
-DIST argo.jar 26624770 RMD160 d789a09818e3d6d3cb87b11411c49959a050fa79 SHA1 305a668897ebd8f9c9c12484b3518a591121e51d SHA256 33ece2dba7ee5cc36f5aab99b3e7df2d641b261d86aacac00745e9d4a2e914cf
+DIST argo.jar 26624770 SHA256 33ece2dba7ee5cc36f5aab99b3e7df2d641b261d86aacac00745e9d4a2e914cf
diff --git a/sci-biology/argo/Manifest b/sci-biology/argo/Manifest
index 82cd4a37c..b3a1cb088 100644
--- a/sci-biology/argo/Manifest
+++ b/sci-biology/argo/Manifest
@@ -1 +1 @@
-DIST workspace-2008-03-11.tgz 109194467 RMD160 873b9c3facfe872108a4c8849a774d5c8c74893f SHA1 382642ae8d7498bb8c21764fa625aa47b4107cfb SHA256 0ee6acb0ebdc17cfbedfedb8559ba950ddd4c5c4ef5f7875fa93f3fad885b99e
+DIST workspace-2008-03-11.tgz 109194467 SHA256 0ee6acb0ebdc17cfbedfedb8559ba950ddd4c5c4ef5f7875fa93f3fad885b99e
diff --git a/sci-biology/autoeditor/Manifest b/sci-biology/autoeditor/Manifest
index 976f421a4..d486be38f 100644
--- a/sci-biology/autoeditor/Manifest
+++ b/sci-biology/autoeditor/Manifest
@@ -1,2 +1,2 @@
-DIST autoEditor-1.20-sample.tar.gz 71953287 RMD160 bfb859a3badec0db85ee31086d2574cd43ebe3a3 SHA1 a36668f1d041552229684c20d9789e7b6301d57e SHA256 f25beb3668ab2b3f2018e5e3b9615995ba5a16b5ce002ff50806287f28f5ef25
-DIST autoEditor-1.20.tar.gz 2438903 RMD160 598ac977eb424959fc052b4c857ef4487b7e13f9 SHA1 985b5e880148a904b157295053945f9530718d30 SHA256 c0c399eda52a10deb0e0362b4caf909014768a4d08e90c900392cdf712cefd66
+DIST autoEditor-1.20-sample.tar.gz 71953287 SHA256 f25beb3668ab2b3f2018e5e3b9615995ba5a16b5ce002ff50806287f28f5ef25
+DIST autoEditor-1.20.tar.gz 2438903 SHA256 c0c399eda52a10deb0e0362b4caf909014768a4d08e90c900392cdf712cefd66
diff --git a/sci-biology/bambus/Manifest b/sci-biology/bambus/Manifest
index 280c7110a..1625f9a2b 100644
--- a/sci-biology/bambus/Manifest
+++ b/sci-biology/bambus/Manifest
@@ -1 +1 @@
-DIST bambus-2.33.tar.gz 504535 RMD160 a5b7fe0e96fb4969d19b6b2e9519dac800d005b7 SHA1 5657fc5db1a829ffdf1b0e88f54df79bd718e16c SHA256 bc8e3c712719bccb00357001713e56f58aac57ae452fd73148eeccff291eefdc
+DIST bambus-2.33.tar.gz 504535 SHA256 bc8e3c712719bccb00357001713e56f58aac57ae452fd73148eeccff291eefdc
diff --git a/sci-biology/brat/Manifest b/sci-biology/brat/Manifest
index a3184a145..20eb8bb45 100644
--- a/sci-biology/brat/Manifest
+++ b/sci-biology/brat/Manifest
@@ -1 +1 @@
-DIST brat-1.1.13.tar.gz 2416868 RMD160 52d9e915bc47ad9955aa032fc40630b8ab6c3800 SHA1 ee0f1dba59c97154bf7b83297e1b0bf8955391d1 SHA256 c36dba367a35767d2088d08b4b01f28090ac4990be4094e83a8ea84733e44df6
+DIST brat-1.1.13.tar.gz 2416868 SHA256 c36dba367a35767d2088d08b4b01f28090ac4990be4094e83a8ea84733e44df6
diff --git a/sci-biology/caftools/Manifest b/sci-biology/caftools/Manifest
index 4946925b6..61d49e197 100644
--- a/sci-biology/caftools/Manifest
+++ b/sci-biology/caftools/Manifest
@@ -1,2 +1,2 @@
-DIST caftools-2.0.2.tar.gz 2645554 RMD160 66ebb894e8899e10349742de1bae67a565a35a9c SHA1 071a170d265ddef46ae2f5effa478421e9cce6ff SHA256 7be5eafbd6817a7869f73c7540b5fdfe184b0be28624cc6ca9a01c52a140d4a2
-DIST caftools-2.0.tar.gz 2644892 RMD160 29f389d0861f8c60efa137a53816abed5286214a SHA1 9ed7ed3d8be2bcde86aab8a79d4a61408cdc49f2 SHA256 b41f323ceb3fd260d6c2ecff1f285548f40301065cea54687eb96717534eaad9
+DIST caftools-2.0.2.tar.gz 2645554 SHA256 7be5eafbd6817a7869f73c7540b5fdfe184b0be28624cc6ca9a01c52a140d4a2
+DIST caftools-2.0.tar.gz 2644892 SHA256 b41f323ceb3fd260d6c2ecff1f285548f40301065cea54687eb96717534eaad9
diff --git a/sci-biology/cap3-bin/Manifest b/sci-biology/cap3-bin/Manifest
index b439b9d12..929721c64 100644
--- a/sci-biology/cap3-bin/Manifest
+++ b/sci-biology/cap3-bin/Manifest
@@ -1,2 +1,2 @@
-DIST cap3.linux.i686_xeon64.tar 430080 RMD160 f5a5e6643747b35de14fa2dab3f5b0d6756abc8c SHA1 b1e06785286f3509a8d08cd2e3400e2abb9e7888 SHA256 fd7112a89dd349e0d11820d4bfab34c3556eb570828f71a8db18b68bd6aa1c2c
-DIST cap3.linux.tar 409600 RMD160 a3e4fc661ac349791b2c9f1d5982d6b34f502122 SHA1 0de4f5de7fd3a4f6bae9d402f5bcd4937fe15ea2 SHA256 49916f0ac2dc7b6f28fd88e79f98eb097e059839bd9311593ef3fc6f77bc4648
+DIST cap3.linux.i686_xeon64.tar 430080 SHA256 fd7112a89dd349e0d11820d4bfab34c3556eb570828f71a8db18b68bd6aa1c2c
+DIST cap3.linux.tar 409600 SHA256 49916f0ac2dc7b6f28fd88e79f98eb097e059839bd9311593ef3fc6f77bc4648
diff --git a/sci-biology/cdbfasta/Manifest b/sci-biology/cdbfasta/Manifest
index 0307c0e7c..e1b15d020 100644
--- a/sci-biology/cdbfasta/Manifest
+++ b/sci-biology/cdbfasta/Manifest
@@ -1 +1 @@
-DIST cdbfasta.tar.gz 59735 RMD160 c90e0ede03a01bf2da77f9beaa3c97fa7e46ff2a SHA1 2419421ab1d753d3bb8778c92236da74fee30526 SHA256 68767e8b2fb9de5a6d68ee16df73293f65e02f05cf2f747a9dd6b8854766722c
+DIST cdbfasta.tar.gz 59735 SHA256 68767e8b2fb9de5a6d68ee16df73293f65e02f05cf2f747a9dd6b8854766722c
diff --git a/sci-biology/clover/Manifest b/sci-biology/clover/Manifest
index 5aea76c1d..701b84d6e 100644
--- a/sci-biology/clover/Manifest
+++ b/sci-biology/clover/Manifest
@@ -1,2 +1,2 @@
-DIST clover-2010-02-19.tar.gz 15641 RMD160 aeeefc128976ce299e5ad65129cc0891104f0348 SHA1 ad30ac6440c6abfe53876ccc94149eec34e16b2f SHA256 f6de99b9ce5676af8b4179e12c4701f81f0b17ac5dadacfe7affa38ad2a585f5
-DIST jaspar2005core 14913 RMD160 6fe43472cc1a2e0389ad9290801db56488773d3e SHA1 be8cdff62cf35f430c0c17f53564529b08000c9c SHA256 498a560c67411789106b50ccdfd9bc41f571d77c2fe9bfba7e95128c0a122fe4
+DIST clover-2010-02-19.tar.gz 15641 SHA256 f6de99b9ce5676af8b4179e12c4701f81f0b17ac5dadacfe7affa38ad2a585f5
+DIST jaspar2005core 14913 SHA256 498a560c67411789106b50ccdfd9bc41f571d77c2fe9bfba7e95128c0a122fe4
diff --git a/sci-biology/clview/Manifest b/sci-biology/clview/Manifest
index b114d4bfb..cbc77e542 100644
--- a/sci-biology/clview/Manifest
+++ b/sci-biology/clview/Manifest
@@ -1,2 +1,2 @@
-DIST clview_linux_i386.tar.gz 1050318 RMD160 233d61452e08d1da7ae0927cb6ecf7c84046088a SHA1 f8b7e4f0925fd4339309d4e7386cc286995fa7cb SHA256 0ee2f0688afcf649b448662e792e5d44378e9d84d2141ecd3ad8c8d5c6a400e4
-DIST clview_src.tar.gz 62178 RMD160 c6da028564dec1a3d958d7d0f98d0d2830664c88 SHA1 78a66a0047471c813b3cc461a8ddc2338d692403 SHA256 52936fddb0284b1cf2515b4e57e01ee9ec2a58dab329e49204d70528c75d5bf2
+DIST clview_linux_i386.tar.gz 1050318 SHA256 0ee2f0688afcf649b448662e792e5d44378e9d84d2141ecd3ad8c8d5c6a400e4
+DIST clview_src.tar.gz 62178 SHA256 52936fddb0284b1cf2515b4e57e01ee9ec2a58dab329e49204d70528c75d5bf2
diff --git a/sci-biology/codonw/Manifest b/sci-biology/codonw/Manifest
index 4e7df633b..ceb5330eb 100644
--- a/sci-biology/codonw/Manifest
+++ b/sci-biology/codonw/Manifest
@@ -1 +1 @@
-DIST CodonWSourceCode_1_4_4.tar.gz 161908 RMD160 9e01d48525e5308e8719f89276a12a3909d64a09 SHA1 a440d1ebdca328ed1f5efa7342267b7a2e764b3b SHA256 951e2a686f7849e0fa225b83b09842d4cf822ecafd67bff0438fc815512183b8
+DIST CodonWSourceCode_1_4_4.tar.gz 161908 SHA256 951e2a686f7849e0fa225b83b09842d4cf822ecafd67bff0438fc815512183b8
diff --git a/sci-biology/dawg/Manifest b/sci-biology/dawg/Manifest
index 4cd63d1fd..803a1eaaf 100644
--- a/sci-biology/dawg/Manifest
+++ b/sci-biology/dawg/Manifest
@@ -1 +1 @@
-DIST dawg-1.1.1-release.tar.gz 213877 RMD160 d2be74cf13c5aecb30cc08f4404d954f6f4272c8 SHA1 fe2942ab9d73d22fd02a8dd06bd8874b7470d487 SHA256 dd621d7913fc1511b52ed2bdc5856e1e591464ddf8ee5c2e7eaa45ac81705286
+DIST dawg-1.1.1-release.tar.gz 213877 SHA256 dd621d7913fc1511b52ed2bdc5856e1e591464ddf8ee5c2e7eaa45ac81705286
diff --git a/sci-biology/embassy-cbstools/Manifest b/sci-biology/embassy-cbstools/Manifest
index fdac590fa..2f18daeb5 100644
--- a/sci-biology/embassy-cbstools/Manifest
+++ b/sci-biology/embassy-cbstools/Manifest
@@ -1 +1 @@
-DIST embassy-cbstools-1.0.0-r3.tar.gz 418819 RMD160 af07491f65c7bedaaa42244c303e1e0bf37bd7a5 SHA1 145bba033f918220658207c08407f6ba16888ac5 SHA256 7d0a0d6bc767063fd3ce7331e56642a84463afd48912748aaa556b29d3e80fd5
+DIST embassy-cbstools-1.0.0-r3.tar.gz 418819 SHA256 7d0a0d6bc767063fd3ce7331e56642a84463afd48912748aaa556b29d3e80fd5
diff --git a/sci-biology/embassy-domainatrix/Manifest b/sci-biology/embassy-domainatrix/Manifest
index f86c85f2f..19264932a 100644
--- a/sci-biology/embassy-domainatrix/Manifest
+++ b/sci-biology/embassy-domainatrix/Manifest
@@ -1 +1 @@
-DIST embassy-domainatrix-0.1.0-r6.tar.gz 448550 RMD160 fc0ae12915380c9718ba113ccfb8455073beba09 SHA1 bb2b9eae1e718925aa01a679f877cd33e5c5bddf SHA256 69f1e09da06d2501b0340e7d047b4c2e425259973c0bd474be4ca8aa8ab6b13c
+DIST embassy-domainatrix-0.1.0-r6.tar.gz 448550 SHA256 69f1e09da06d2501b0340e7d047b4c2e425259973c0bd474be4ca8aa8ab6b13c
diff --git a/sci-biology/embassy-domalign/Manifest b/sci-biology/embassy-domalign/Manifest
index 52e8d4731..3da49fa2d 100644
--- a/sci-biology/embassy-domalign/Manifest
+++ b/sci-biology/embassy-domalign/Manifest
@@ -1 +1 @@
-DIST embassy-domalign-0.1.0-r5.tar.gz 472143 RMD160 0993e1ee72b7c95d74b03647ed24e1ac4ded1099 SHA1 62c7acfd19c3e2670d4de7da6297c5b57cdd561a SHA256 77f05f71e188307dbb2e4af0b2d32a6707cdc6678ee9e94f402b6a7277cca34f
+DIST embassy-domalign-0.1.0-r5.tar.gz 472143 SHA256 77f05f71e188307dbb2e4af0b2d32a6707cdc6678ee9e94f402b6a7277cca34f
diff --git a/sci-biology/embassy-domsearch/Manifest b/sci-biology/embassy-domsearch/Manifest
index 5ab117668..ec121d65b 100644
--- a/sci-biology/embassy-domsearch/Manifest
+++ b/sci-biology/embassy-domsearch/Manifest
@@ -1 +1 @@
-DIST embassy-domsearch-0.1.0-r5.tar.gz 487462 RMD160 0f10e49607acf2a60ddb79c38c1c5980d13651a2 SHA1 b772cfda0f72a49cecb0acc984e87cbdcd5d6dea SHA256 feca6144b758fed54ae61b6a7f36522e6e04e23eab875b953757a43af67e6e99
+DIST embassy-domsearch-0.1.0-r5.tar.gz 487462 SHA256 feca6144b758fed54ae61b6a7f36522e6e04e23eab875b953757a43af67e6e99
diff --git a/sci-biology/embassy-emnu/Manifest b/sci-biology/embassy-emnu/Manifest
index 603cc69a1..35e2cecec 100644
--- a/sci-biology/embassy-emnu/Manifest
+++ b/sci-biology/embassy-emnu/Manifest
@@ -1 +1 @@
-DIST embassy-emnu-1.05-r7.tar.gz 398394 RMD160 87a726ca70cad301e6ca311a4eb318c7978a1f77 SHA1 795f31e3b87be79210e7883dba35546e86f85f3a SHA256 a8ec44ea1d708a9c728775a5c1a3849e4e78ae6c2825e76c76098b7b48e5c596
+DIST embassy-emnu-1.05-r7.tar.gz 398394 SHA256 a8ec44ea1d708a9c728775a5c1a3849e4e78ae6c2825e76c76098b7b48e5c596
diff --git a/sci-biology/embassy-esim4/Manifest b/sci-biology/embassy-esim4/Manifest
index e35df3c69..c619f78e3 100644
--- a/sci-biology/embassy-esim4/Manifest
+++ b/sci-biology/embassy-esim4/Manifest
@@ -1 +1 @@
-DIST embassy-esim4-1.0.0-r7.tar.gz 437980 RMD160 2aa07187380f6a6e894162cac5630e57be8dcc1b SHA1 8aec194b50ecae0b29da1ca400bb57762bab3046 SHA256 f48486152d020ba2fdb1c6d2fa3787d326ddb503a8df9ffaa505579b994112b2
+DIST embassy-esim4-1.0.0-r7.tar.gz 437980 SHA256 f48486152d020ba2fdb1c6d2fa3787d326ddb503a8df9ffaa505579b994112b2
diff --git a/sci-biology/embassy-hmmer/Manifest b/sci-biology/embassy-hmmer/Manifest
index 5c27dc062..0cb2e05fe 100644
--- a/sci-biology/embassy-hmmer/Manifest
+++ b/sci-biology/embassy-hmmer/Manifest
@@ -1 +1 @@
-DIST embassy-hmmer-2.3.2-r4.tar.gz 583748 RMD160 29fa3ce03cb7ce857d1ecee5f92c5f6f3828999b SHA1 87d355aad1b68b5374ba31e35a3a952252e215ee SHA256 3c13568d916e4cb2e1fa4f77c8f7df0140c2785c0a3482b73cde4c83c80bfbf8
+DIST embassy-hmmer-2.3.2-r4.tar.gz 583748 SHA256 3c13568d916e4cb2e1fa4f77c8f7df0140c2785c0a3482b73cde4c83c80bfbf8
diff --git a/sci-biology/embassy-iprscan/Manifest b/sci-biology/embassy-iprscan/Manifest
index 827ee76a0..28f71cf25 100644
--- a/sci-biology/embassy-iprscan/Manifest
+++ b/sci-biology/embassy-iprscan/Manifest
@@ -1 +1 @@
-DIST embassy-iprscan-4.3.1-r2.tar.gz 370376 RMD160 360db6f7332d86d85ca09d2749182393895c741f SHA1 d50017241090c0013d2f8792fb3d473e7cf44466 SHA256 e4f2bc429a13a62da004fc202a585525e0e9610f670ac206f6ebc1a27bc3516c
+DIST embassy-iprscan-4.3.1-r2.tar.gz 370376 SHA256 e4f2bc429a13a62da004fc202a585525e0e9610f670ac206f6ebc1a27bc3516c
diff --git a/sci-biology/embassy-mse/Manifest b/sci-biology/embassy-mse/Manifest
index ac5d64831..e1432c036 100644
--- a/sci-biology/embassy-mse/Manifest
+++ b/sci-biology/embassy-mse/Manifest
@@ -1 +1 @@
-DIST embassy-mse-3.0.0.tar.gz 435315 RMD160 9e94bdc1cbff5b684a6d7f33a7a95de33c1b910e SHA1 bae84ef0154f444037653df322fb605d013dca0c SHA256 f3bb205b197d4cc4ad7d6ee8e3696eb59d84a8b60a8369d4a645871d0c9619c3
+DIST embassy-mse-3.0.0.tar.gz 435315 SHA256 f3bb205b197d4cc4ad7d6ee8e3696eb59d84a8b60a8369d4a645871d0c9619c3
diff --git a/sci-biology/embassy-phylipnew/Manifest b/sci-biology/embassy-phylipnew/Manifest
index b173e071b..3ac6a588e 100644
--- a/sci-biology/embassy-phylipnew/Manifest
+++ b/sci-biology/embassy-phylipnew/Manifest
@@ -1 +1 @@
-DIST embassy-phylipnew-3.69.tar.gz 1667760 RMD160 8cb425f8e7af99d0081d2014403de74ad8e84feb SHA1 65e265190873b14c7449f6d53cc017ea90b612b6 SHA256 2e74ce4f70ad5421ea81e84c199a08bfb4a236e2cf2769be4f309c4badd1302b
+DIST embassy-phylipnew-3.69.tar.gz 1667760 SHA256 2e74ce4f70ad5421ea81e84c199a08bfb4a236e2cf2769be4f309c4badd1302b
diff --git a/sci-biology/embassy-signature/Manifest b/sci-biology/embassy-signature/Manifest
index 84c6262a1..6c0721782 100644
--- a/sci-biology/embassy-signature/Manifest
+++ b/sci-biology/embassy-signature/Manifest
@@ -1 +1 @@
-DIST embassy-signature-0.1.0-r5.tar.gz 594872 RMD160 8ea890ddfd206f392fe4b146f7a648582ffd88dd SHA1 e690bb57d2c32a08d85159e56ae5fa4a5c1293df SHA256 0be483439379ef985dcf9a63a3989ef372fc10d7695bf32106f246881c567e0c
+DIST embassy-signature-0.1.0-r5.tar.gz 594872 SHA256 0be483439379ef985dcf9a63a3989ef372fc10d7695bf32106f246881c567e0c
diff --git a/sci-biology/embassy-structure/Manifest b/sci-biology/embassy-structure/Manifest
index 56085d977..331faf524 100644
--- a/sci-biology/embassy-structure/Manifest
+++ b/sci-biology/embassy-structure/Manifest
@@ -1 +1 @@
-DIST embassy-structure-0.1.0-r5.tar.gz 561513 RMD160 743f89046fa327769d79d6a3ef86a02f33b9ea0c SHA1 1792e70ede19999443baa8e94c19dca5b764759e SHA256 3f6007a87c788acebca7642ed513f017e676d6de13febec8e139dfbaa5b88722
+DIST embassy-structure-0.1.0-r5.tar.gz 561513 SHA256 3f6007a87c788acebca7642ed513f017e676d6de13febec8e139dfbaa5b88722
diff --git a/sci-biology/embassy-topo/Manifest b/sci-biology/embassy-topo/Manifest
index b6810fdcd..7969cab2c 100644
--- a/sci-biology/embassy-topo/Manifest
+++ b/sci-biology/embassy-topo/Manifest
@@ -1 +1 @@
-DIST embassy-topo-2.0.0.tar.gz 386287 RMD160 d25cdde9ea76253c088754f1633389ce87e79866 SHA1 c6373211ed36866497ad54a6f8bf9bc0aa4733bc SHA256 023e1f1e92e0372c4029c9e19043af0416d0e294440bb368d30126c5ed330691
+DIST embassy-topo-2.0.0.tar.gz 386287 SHA256 023e1f1e92e0372c4029c9e19043af0416d0e294440bb368d30126c5ed330691
diff --git a/sci-biology/embassy-vienna/Manifest b/sci-biology/embassy-vienna/Manifest
index 5a7a2b663..dacc18f6a 100644
--- a/sci-biology/embassy-vienna/Manifest
+++ b/sci-biology/embassy-vienna/Manifest
@@ -1 +1 @@
-DIST embassy-vienna-1.7.2-r2.tar.gz 852330 RMD160 70a80bfe53fbd2c879c41d2c790e1dd9f8ead4b7 SHA1 f51d0e6c525f1f507b71275212f39571fad8a4e1 SHA256 568f5217068906c4030ae52d8fd4bf27e4c82efe8b93a65ccd134e828de28f5f
+DIST embassy-vienna-1.7.2-r2.tar.gz 852330 SHA256 568f5217068906c4030ae52d8fd4bf27e4c82efe8b93a65ccd134e828de28f5f
diff --git a/sci-biology/erpin/Manifest b/sci-biology/erpin/Manifest
index 0a0c047c4..a5845e4ac 100644
--- a/sci-biology/erpin/Manifest
+++ b/sci-biology/erpin/Manifest
@@ -1,2 +1,2 @@
-DIST ErpinBatch.1.4.tar.gz 2195075 RMD160 a9044e42d41081fd72b6d072b94e4b2ce53dd38c SHA1 9344ce75ce4e751d3c82ee7ad87946f65b797124 SHA256 5da4c69d88092e79f4f5d73e7d67dfccbb3d4a8cbe38c74169548ef608f25808
-DIST erpin5.5b.serv.tar.gz 1145698 RMD160 289b7b325b3f5dc45b93df4eefb7d56d08500f9e SHA1 b0a748b8761b2ac7be998f8498394cdc3f54d563 SHA256 0433ed25dd54491ddc4c025bb61d78d36797c2c83c61f260b5663c44cbad4d4d
+DIST ErpinBatch.1.4.tar.gz 2195075 SHA256 5da4c69d88092e79f4f5d73e7d67dfccbb3d4a8cbe38c74169548ef608f25808
+DIST erpin5.5b.serv.tar.gz 1145698 SHA256 0433ed25dd54491ddc4c025bb61d78d36797c2c83c61f260b5663c44cbad4d4d
diff --git a/sci-biology/est2uni/Manifest b/sci-biology/est2uni/Manifest
index 8e8fa1fa4..58b86254b 100644
--- a/sci-biology/est2uni/Manifest
+++ b/sci-biology/est2uni/Manifest
@@ -1,5 +1,5 @@
-DIST GO.terms_and_ids 1773108 RMD160 6df24848cedea76de66bbebf7eaa5eadd58e016c SHA1 e73465e4c1606245be723417adf9bcdc5c454965 SHA256 8a6d670f4ecdfa81a609abdd959d13fb9f695132eb08a2b412a8d80b50fd7e64
-DIST UniVec 1062966 RMD160 ef634cd9e8996d8e3dc6e5fdbabb09ee4f5df2c3 SHA1 c599178ef9e6c6865fd531018145ed43851e5e01 SHA256 6fc0e3644a2ecb59705801416d76d7d74aa8fa5788e955a024b2d9614376f425
-DIST UniVec_Core 542650 RMD160 a8cf42b9015622a8ac52839c7b794bbad4c1f92a SHA1 6ebaa99115661302125bd5b15a7caace264f2cda SHA256 7456353d072da508538052286c82ff5fec740a6ceac5621f68fd4eb35bdff9ef
-DIST est2uni_0.27.tar.gz 4616613 RMD160 06ec260f79fe11f7779b75aad825e665f421d4eb SHA1 5ee9b5dc51f4829c5ed0d4ddd47bb68e7f3c43ee SHA256 33d2f2981ca70fa6707d3a2f310c0492cd12a430b6bb9b7ad8697a8fc3305cd4
-DIST gene_ontology.obo 19990996 RMD160 b3584271ab0a05909cde9a92e6eb635b08fe23be SHA1 bdb9d396d4320bf639be310cf6f93b08b25ef0e9 SHA256 7f70c7a1dd4b75f6055f05c5e5445a49ecf20fed8172d54ec2d04722842ff19b
+DIST GO.terms_and_ids 1773108 SHA256 8a6d670f4ecdfa81a609abdd959d13fb9f695132eb08a2b412a8d80b50fd7e64
+DIST UniVec 1062966 SHA256 6fc0e3644a2ecb59705801416d76d7d74aa8fa5788e955a024b2d9614376f425
+DIST UniVec_Core 542650 SHA256 7456353d072da508538052286c82ff5fec740a6ceac5621f68fd4eb35bdff9ef
+DIST est2uni_0.27.tar.gz 4616613 SHA256 33d2f2981ca70fa6707d3a2f310c0492cd12a430b6bb9b7ad8697a8fc3305cd4
+DIST gene_ontology.obo 19990996 SHA256 7f70c7a1dd4b75f6055f05c5e5445a49ecf20fed8172d54ec2d04722842ff19b
diff --git a/sci-biology/fastdnaml/Manifest b/sci-biology/fastdnaml/Manifest
index f86e2eecd..e096c6ef0 100644
--- a/sci-biology/fastdnaml/Manifest
+++ b/sci-biology/fastdnaml/Manifest
@@ -1,2 +1,2 @@
-DIST fastdnaml_1.2.2-8.diff.gz 6508 RMD160 86cded16945ed2d2c247e332cfcd733676caadee SHA1 5ed46ce13f8bc3d5c1d51a7b93cac6b8646ddc7e SHA256 11b4b4ab18378d4a58fa7c290cf8121a49392768765fee70983b1d45ee70e294
-DIST fastdnaml_1.2.2.orig.tar.gz 70005 RMD160 1ded8fe0c9621d9fb2f6f090a97d16fbdf8e18bf SHA1 78197cbd760163f65085ac80c36d4286a1f29e34 SHA256 34690ec9a8e2fe1d86bea4a7cb10f7bc47e5e4c30719e1c9451210df4f160180
+DIST fastdnaml_1.2.2-8.diff.gz 6508 SHA256 11b4b4ab18378d4a58fa7c290cf8121a49392768765fee70983b1d45ee70e294
+DIST fastdnaml_1.2.2.orig.tar.gz 70005 SHA256 34690ec9a8e2fe1d86bea4a7cb10f7bc47e5e4c30719e1c9451210df4f160180
diff --git a/sci-biology/gap2caf/Manifest b/sci-biology/gap2caf/Manifest
index eca4982c9..3dbd5c548 100644
--- a/sci-biology/gap2caf/Manifest
+++ b/sci-biology/gap2caf/Manifest
@@ -1,2 +1,2 @@
-DIST gap2caf-2.1.0.tar.gz 92905 RMD160 8b19963ca9e845d9bae2e7fb8253cb77bae78857 SHA1 fdbffcd159caf75d95207e54cab3c8b8270cc8e8 SHA256 1fd237cf1e83c3c4c3b67d2d35c9f059cc7eda9f6ac7886fab994e2386283b9a
-DIST staden-2.0.0b8.tar.gz 4312143 RMD160 68b91a80fae29e0bf8f7e6ca1c0781591113684c SHA1 742092ff7bfb5acd3376ac85d5ab50507d1dd02f SHA256 c13aa0c22dcac6b10d13501dcb630efad51d7c171968e0bb30113667b49cfa9d
+DIST gap2caf-2.1.0.tar.gz 92905 SHA256 1fd237cf1e83c3c4c3b67d2d35c9f059cc7eda9f6ac7886fab994e2386283b9a
+DIST staden-2.0.0b8.tar.gz 4312143 SHA256 c13aa0c22dcac6b10d13501dcb630efad51d7c171968e0bb30113667b49cfa9d
diff --git a/sci-biology/gbench/Manifest b/sci-biology/gbench/Manifest
index 3f3f689b8..c4cdd755d 100644
--- a/sci-biology/gbench/Manifest
+++ b/sci-biology/gbench/Manifest
@@ -1 +1 @@
-DIST gbench-src-2.3.2.tgz 23329652 RMD160 a4aedb72fe3814c98a69b8ffe21432e51058c15d SHA1 ab1ace68e50d6f7f547b2151dd0b18f82f7d7848 SHA256 ea45974d4b843a0033c587b575cb22388de96d2e300e1bedc8e16a11d9e154be
+DIST gbench-src-2.3.2.tgz 23329652 SHA256 ea45974d4b843a0033c587b575cb22388de96d2e300e1bedc8e16a11d9e154be
diff --git a/sci-biology/genepop/Manifest b/sci-biology/genepop/Manifest
index 34c216fde..608a3f35e 100644
--- a/sci-biology/genepop/Manifest
+++ b/sci-biology/genepop/Manifest
@@ -1 +1 @@
-DIST genepop-4.0.10.zip 843785 RMD160 8d27e63681929f5cfceec90ce82763c32694cd2a SHA1 a2c4abf99c979197e516fda54a406714d9cfd697 SHA256 22c8134b6be30e9b6983e289ad97bc9e096cc5fed363d9650d9623e21d34a3d2
+DIST genepop-4.0.10.zip 843785 SHA256 22c8134b6be30e9b6983e289ad97bc9e096cc5fed363d9650d9623e21d34a3d2
diff --git a/sci-biology/generecon/Manifest b/sci-biology/generecon/Manifest
index 769a3ac1e..687d3ab45 100644
--- a/sci-biology/generecon/Manifest
+++ b/sci-biology/generecon/Manifest
@@ -1 +1 @@
-DIST generecon-1.2.1.tar.gz 239507 RMD160 1d756645a091b5d7cb3eefac253e65389f416f42 SHA1 e49afec006df58f27c0f083008b0ad51789ae469 SHA256 2a6230891ca4d42408a98afdd820da56c26c225625fed03d5a9b4c0b6c1cbb48
+DIST generecon-1.2.1.tar.gz 239507 SHA256 2a6230891ca4d42408a98afdd820da56c26c225625fed03d5a9b4c0b6c1cbb48
diff --git a/sci-biology/genseed/Manifest b/sci-biology/genseed/Manifest
index 9e829c6d9..6f1302212 100644
--- a/sci-biology/genseed/Manifest
+++ b/sci-biology/genseed/Manifest
@@ -1 +1 @@
-DIST genseed-1.0.22.tar.gz 13923 RMD160 b571ad7a818ad2cef2599ed0f6a75813a1de87de SHA1 c518ef877317e70d6546bc4e70bbb1d864ae2764 SHA256 586da822bfabe27c183bc0f83c8b4c6b0a29accae68d0ccc101c2d33638ced5d
+DIST genseed-1.0.22.tar.gz 13923 SHA256 586da822bfabe27c183bc0f83c8b4c6b0a29accae68d0ccc101c2d33638ced5d
diff --git a/sci-biology/grappa/Manifest b/sci-biology/grappa/Manifest
index 66eea2ab3..4c15f2b85 100644
--- a/sci-biology/grappa/Manifest
+++ b/sci-biology/grappa/Manifest
@@ -1 +1 @@
-DIST GRAPPA20.tar.gz 172261 RMD160 7aac3b47c47a23ac85b853d6da1b6806c5f3677a SHA1 6d933bb16a5d7c9686c88b160ff348d5bc78cd01 SHA256 19b3c5ab21c845eaf4fcf56fcf09a15db84597d8438155bb463d8f3e1bb51103
+DIST GRAPPA20.tar.gz 172261 SHA256 19b3c5ab21c845eaf4fcf56fcf09a15db84597d8438155bb463d8f3e1bb51103
diff --git a/sci-biology/jalview/Manifest b/sci-biology/jalview/Manifest
index 5d2aeff84..3726e0d9d 100644
--- a/sci-biology/jalview/Manifest
+++ b/sci-biology/jalview/Manifest
@@ -1 +1 @@
-DIST jalview_2_6_1.tar.gz 16315652 RMD160 984442c91fcee6abda565521ede9c20ef7a29cc1 SHA1 af38da24eb50298f86d22658100f35cf14f70a88 SHA256 65f211e5aff682b8bc3f36c0b24051c38fd1f66fe4e45bb94d20ee84320c8250
+DIST jalview_2_6_1.tar.gz 16315652 SHA256 65f211e5aff682b8bc3f36c0b24051c38fd1f66fe4e45bb94d20ee84320c8250
diff --git a/sci-biology/lucy/Manifest b/sci-biology/lucy/Manifest
index 803911670..9b9c7b5f2 100644
--- a/sci-biology/lucy/Manifest
+++ b/sci-biology/lucy/Manifest
@@ -1 +1 @@
-DIST lucy1.20.tar.gz 1457619 RMD160 de6f9a787f9bd63b8d297beb2ecdc9793e3c183d SHA1 890006f550efd06745e7156359ee8b519d3b5f62 SHA256 e06313f6d60b1b1429aad6c86c02df22edc6337613fafa5db0a09a09c7a35af3
+DIST lucy1.20.tar.gz 1457619 SHA256 e06313f6d60b1b1429aad6c86c02df22edc6337613fafa5db0a09a09c7a35af3
diff --git a/sci-biology/mavid/Manifest b/sci-biology/mavid/Manifest
index 3fe1f6dbd..f26374e41 100644
--- a/sci-biology/mavid/Manifest
+++ b/sci-biology/mavid/Manifest
@@ -1 +1 @@
-DIST mavid-package-2.0.4.tar.gz 85863 RMD160 b1ad1f2d3f027d97ca9e5ab048fe6f6da94ecce3 SHA1 121db66a858d88774dd0536d7376955c3c3f846c SHA256 9cfb216635ba463e8cb6de4e5e661c9e9c6d408af50a449af018ebfd11cf896a
+DIST mavid-package-2.0.4.tar.gz 85863 SHA256 9cfb216635ba463e8cb6de4e5e661c9e9c6d408af50a449af018ebfd11cf896a
diff --git a/sci-biology/merlin/Manifest b/sci-biology/merlin/Manifest
index 55c46188c..de28be093 100644
--- a/sci-biology/merlin/Manifest
+++ b/sci-biology/merlin/Manifest
@@ -1 +1 @@
-DIST merlin-1.1.2.tar.gz 609007 RMD160 44deef07d627216aefb19ebafebb18a6510737bd SHA1 d5227276eae862506c7ed4475255c9be182585df SHA256 aa3c087b1c717209389705bf2ace4c24884575014a561dff250c0be93fe1e411
+DIST merlin-1.1.2.tar.gz 609007 SHA256 aa3c087b1c717209389705bf2ace4c24884575014a561dff250c0be93fe1e411
diff --git a/sci-biology/miranda/Manifest b/sci-biology/miranda/Manifest
index 25790cfeb..a7a03b7f5 100644
--- a/sci-biology/miranda/Manifest
+++ b/sci-biology/miranda/Manifest
@@ -1 +1 @@
-DIST miRanda-aug2010.tar.gz 198538 RMD160 42be8f19309cb22e4f60972e179c1dcbda886d4c SHA1 c80313c34623208a7d82a1221b64498ccc9e65e1 SHA256 a671da562cf4636ef5085b27349df2df2f335774663fd423deb08f31212ec778
+DIST miRanda-aug2010.tar.gz 198538 SHA256 a671da562cf4636ef5085b27349df2df2f335774663fd423deb08f31212ec778
diff --git a/sci-biology/mrbayes/Manifest b/sci-biology/mrbayes/Manifest
index 261d4c275..537b716e2 100644
--- a/sci-biology/mrbayes/Manifest
+++ b/sci-biology/mrbayes/Manifest
@@ -1 +1 @@
-DIST mrbayes-3.1.2.tar.gz 545968 RMD160 b90b9406f34806bcd18bc49dc998b7ed444e93c3 SHA1 db73f53361688e1451ec155ccbdd130c3f889817 SHA256 c60253de1980c9f0a0eb684fffe7ba428fda7c39a3edcb6acf384b5e1443f2f4
+DIST mrbayes-3.1.2.tar.gz 545968 SHA256 c60253de1980c9f0a0eb684fffe7ba428fda7c39a3edcb6acf384b5e1443f2f4
diff --git a/sci-biology/mreps/Manifest b/sci-biology/mreps/Manifest
index 121b9b25c..47500830e 100644
--- a/sci-biology/mreps/Manifest
+++ b/sci-biology/mreps/Manifest
@@ -1 +1 @@
-DIST mreps-2.5.tar.gz 28017 RMD160 11f43d34dad37d0c4037ffd1953cf9b6b6a71ba0 SHA1 48f6abd68fa2082bb1c2b259e93c37074e4b9f50 SHA256 fa39c37787311903ce93e1ab519dc00ca0b104285beae400aa5f72e148d17a58
+DIST mreps-2.5.tar.gz 28017 SHA256 fa39c37787311903ce93e1ab519dc00ca0b104285beae400aa5f72e148d17a58
diff --git a/sci-biology/mrfast/Manifest b/sci-biology/mrfast/Manifest
index 35dec09a8..a3da4999d 100644
--- a/sci-biology/mrfast/Manifest
+++ b/sci-biology/mrfast/Manifest
@@ -1 +1 @@
-DIST mrfast-2.1.0.3.tar.gz 42853 RMD160 70a05079efbef01fd41786433cb5ff9c29d87d0c SHA1 8165d5ca855dc0eee32a7e34777a29f978a952e6 SHA256 2e96e908819ef4b982dd749444fe7b7a5198a0d8df1e4edb475394091c398f4a
+DIST mrfast-2.1.0.3.tar.gz 42853 SHA256 2e96e908819ef4b982dd749444fe7b7a5198a0d8df1e4edb475394091c398f4a
diff --git a/sci-biology/mrsfast/Manifest b/sci-biology/mrsfast/Manifest
index 017154a72..655084d70 100644
--- a/sci-biology/mrsfast/Manifest
+++ b/sci-biology/mrsfast/Manifest
@@ -1 +1 @@
-DIST mrsfast-2.3.0.2.zip 37190 RMD160 96bdb10ea767ffb71f0583a0f2cea0884c7ea2f2 SHA1 41d8b4158834851f523656a193d91dc2570e6e6c SHA256 2b08cb0c923d479f87c8224351c8e478645a06032f6e9f886fa713b2aa780441
+DIST mrsfast-2.3.0.2.zip 37190 SHA256 2b08cb0c923d479f87c8224351c8e478645a06032f6e9f886fa713b2aa780441
diff --git a/sci-biology/nrcl/Manifest b/sci-biology/nrcl/Manifest
index 1305c6ae6..d014d9f15 100644
--- a/sci-biology/nrcl/Manifest
+++ b/sci-biology/nrcl/Manifest
@@ -1,2 +1,2 @@
-DIST gclib.tar.gz 82727 RMD160 f12395354b47980577e9d83cc100a6bf6568bd33 SHA1 4c433e6a87663211dc00e2d855a11a058e5b6b48 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b
-DIST nrcl-110625.tar.gz 14782 RMD160 c3e122ccd1d30e25c278e9f0a7928ab6d1a1e451 SHA1 8650388bbf27640f5b2c261e1eafe286e34adcb4 SHA256 8795728d60416d1329a352479335b084d3627af8e6ba5e4ba043041970886f46
+DIST gclib.tar.gz 82727 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b
+DIST nrcl-110625.tar.gz 14782 SHA256 8795728d60416d1329a352479335b084d3627af8e6ba5e4ba043041970886f46
diff --git a/sci-biology/perlprimer/Manifest b/sci-biology/perlprimer/Manifest
index 530536b80..f0326ffc4 100644
--- a/sci-biology/perlprimer/Manifest
+++ b/sci-biology/perlprimer/Manifest
@@ -1 +1 @@
-DIST perlprimer-1.1.17.tar.bz2 355360 RMD160 02c37fcdc8db5080897147184ff0e2042e3cd905 SHA1 0377f8bf14d94a60038d664ba7872707706d482c SHA256 7325af199744bdbffd499186548f66b82a96898277d88d2fd2df1852bfa19f3c
+DIST perlprimer-1.1.17.tar.bz2 355360 SHA256 7325af199744bdbffd499186548f66b82a96898277d88d2fd2df1852bfa19f3c
diff --git a/sci-biology/proda/Manifest b/sci-biology/proda/Manifest
index be5c7e38e..9b503d4f5 100644
--- a/sci-biology/proda/Manifest
+++ b/sci-biology/proda/Manifest
@@ -1 +1 @@
-DIST proda_1_0.tar.gz 38868 RMD160 b024496c935cebb74d50479d8cdeacce820358b1 SHA1 44303e1639b5c52278758d23d149ef1c434593a4 SHA256 439a93bf35e1a29ac1d5dde51e61f2cb174618596afaaaaa27d33a8ea1868a08
+DIST proda_1_0.tar.gz 38868 SHA256 439a93bf35e1a29ac1d5dde51e61f2cb174618596afaaaaa27d33a8ea1868a08
diff --git a/sci-biology/psx/Manifest b/sci-biology/psx/Manifest
index f5ca06392..70322845b 100644
--- a/sci-biology/psx/Manifest
+++ b/sci-biology/psx/Manifest
@@ -1 +1 @@
-DIST psx.tar.gz 7797 RMD160 2b6de75126f19cbb60e1ed0b9988a935ad021a45 SHA1 3e0ac61f9ef2e546ff571bfc269e904138b445b9 SHA256 6759f1001be93fcfca9cebd0c764088c4942f2d7feee100d10cf2fbb39e4cd5a
+DIST psx.tar.gz 7797 SHA256 6759f1001be93fcfca9cebd0c764088c4942f2d7feee100d10cf2fbb39e4cd5a
diff --git a/sci-biology/quicktree/Manifest b/sci-biology/quicktree/Manifest
index f43875b38..3bb33a29d 100644
--- a/sci-biology/quicktree/Manifest
+++ b/sci-biology/quicktree/Manifest
@@ -1 +1 @@
-DIST quicktree-1.1.tar.gz 39035 RMD160 ea4f03cc79061421dab72b568c822ff13a147a44 SHA1 9924d51801149d59fd90f704aa7e5802f7b1ef31 SHA256 3b5986a8d7b8e59ad5cdc30bd7c7d91431909c25230e8fed13494f21337da6ef
+DIST quicktree-1.1.tar.gz 39035 SHA256 3b5986a8d7b8e59ad5cdc30bd7c7d91431909c25230e8fed13494f21337da6ef
diff --git a/sci-biology/rnaplex/Manifest b/sci-biology/rnaplex/Manifest
index 02d3e9593..3a17125fb 100644
--- a/sci-biology/rnaplex/Manifest
+++ b/sci-biology/rnaplex/Manifest
@@ -1 +1 @@
-DIST RNAplex-0.2.tar.gz 581128 RMD160 870778a0d645978110230704a1ead5dd2f787bfb SHA1 91322eec529242655715035a0bdbbad6b54e23ff SHA256 7907873009c8fc03b1918400bb82122774bc5df2602adc1426c5686a0b3f37de
+DIST RNAplex-0.2.tar.gz 581128 SHA256 7907873009c8fc03b1918400bb82122774bc5df2602adc1426c5686a0b3f37de
diff --git a/sci-biology/roche454ace2caf/Manifest b/sci-biology/roche454ace2caf/Manifest
index 0a1598b03..584773ae0 100644
--- a/sci-biology/roche454ace2caf/Manifest
+++ b/sci-biology/roche454ace2caf/Manifest
@@ -1 +1 @@
-DIST roche454ace2gap-2010-12-08.tgz 261317 RMD160 e7760661f16ffd69a7d7edcb661cac3a8cf6ad36 SHA1 deff8d9239cb13c9a1d6f54f9fdc2436163cd1fc SHA256 aee60307eb8f9369ed0b17599c946e1b465c71ad122563b216af453e4f30ea93
+DIST roche454ace2gap-2010-12-08.tgz 261317 SHA256 aee60307eb8f9369ed0b17599c946e1b465c71ad122563b216af453e4f30ea93
diff --git a/sci-biology/sclust/Manifest b/sci-biology/sclust/Manifest
index c6fb491a2..264a2cf38 100644
--- a/sci-biology/sclust/Manifest
+++ b/sci-biology/sclust/Manifest
@@ -1,2 +1,2 @@
-DIST cdbfasta.tar.gz 59735 RMD160 c90e0ede03a01bf2da77f9beaa3c97fa7e46ff2a SHA1 2419421ab1d753d3bb8778c92236da74fee30526 SHA256 68767e8b2fb9de5a6d68ee16df73293f65e02f05cf2f747a9dd6b8854766722c
-DIST sclust.tar.gz 13467 RMD160 b528a2af1206dca4d32bd73ee5a3b2096abb9210 SHA1 454e507ac10ed0106c4a208b4b60c9fd88cb1852 SHA256 2ec82d2f8751188a7b774e2335839ba931dcecec82d68f7d755ba1c871ab4f9c
+DIST cdbfasta.tar.gz 59735 SHA256 68767e8b2fb9de5a6d68ee16df73293f65e02f05cf2f747a9dd6b8854766722c
+DIST sclust.tar.gz 13467 SHA256 2ec82d2f8751188a7b774e2335839ba931dcecec82d68f7d755ba1c871ab4f9c
diff --git a/sci-biology/sequin/Manifest b/sci-biology/sequin/Manifest
index 70145e1c6..442d7db82 100644
--- a/sci-biology/sequin/Manifest
+++ b/sci-biology/sequin/Manifest
@@ -1,2 +1,2 @@
-DIST sequin-20090722-x86.tar.gz 5999782 RMD160 44ce5da6cebdc0cbf385982dc721acf5c0ab982d SHA1 80804ec6fe8beac91f3b56f4ca8dcdee43dddb16 SHA256 f12fe7fa084a1d19a75e67cfcb4027cefb91c819b7c6219499072a87f00bdc51
-DIST sequin-20090722-x86_64.tar.gz 6911415 RMD160 69da84f677231a5f98ae80de87681355810f31da SHA1 84b4bb6e5a93534fcb580c2e92050885f3a72c69 SHA256 338de057edf9c14e911f69c372c9480675c2b5a4b24efed605dcbdf7e8e4d486
+DIST sequin-20090722-x86.tar.gz 5999782 SHA256 f12fe7fa084a1d19a75e67cfcb4027cefb91c819b7c6219499072a87f00bdc51
+DIST sequin-20090722-x86_64.tar.gz 6911415 SHA256 338de057edf9c14e911f69c372c9480675c2b5a4b24efed605dcbdf7e8e4d486
diff --git a/sci-biology/sff_dump/Manifest b/sci-biology/sff_dump/Manifest
index 921b2de41..9434d5950 100644
--- a/sci-biology/sff_dump/Manifest
+++ b/sci-biology/sff_dump/Manifest
@@ -1 +1 @@
-DIST sff_dump-1.04.tgz 55640 RMD160 4a83c4dd8427e101d15e28987434638408a6eb83 SHA1 ad2854724029ad476fe1719d6953cc9a58338f5f SHA256 94bfeb55bc146f2e0183a0b85622e3fa19772d4d2fb324332d72f4cc5a4104ba
+DIST sff_dump-1.04.tgz 55640 SHA256 94bfeb55bc146f2e0183a0b85622e3fa19772d4d2fb324332d72f4cc5a4104ba
diff --git a/sci-biology/signalp/Manifest b/sci-biology/signalp/Manifest
index 5c42d4ad3..4f4d96631 100644
--- a/sci-biology/signalp/Manifest
+++ b/sci-biology/signalp/Manifest
@@ -1 +1 @@
-DIST signalp-3.0.Linux.tar.Z 1216617 RMD160 9b7ec647d015d5b0c30eef7034f3434befc88f10 SHA1 65e1a277ae03fb61b69bfef82782dd8e9f60fc93 SHA256 260c2e5bd945b386e833a7b7326cff6d7332302868e99c0aeae306212047c0c2
+DIST signalp-3.0.Linux.tar.Z 1216617 SHA256 260c2e5bd945b386e833a7b7326cff6d7332302868e99c0aeae306212047c0c2
diff --git a/sci-biology/smalt-bin/Manifest b/sci-biology/smalt-bin/Manifest
index 7d5c651a8..f9f5194ab 100644
--- a/sci-biology/smalt-bin/Manifest
+++ b/sci-biology/smalt-bin/Manifest
@@ -1 +1 @@
-DIST smalt-0.5.1.tgz 534824 RMD160 4c0a26256784f3eae2d3e9e62142faacb67c8e68 SHA1 070e548905306c8d41a5cf02e63287318e80e892 SHA256 c8bca18a7ded7ad4b7070be7478bd046cf2d6a0a81054dfd96ebdba65c0a49d0
+DIST smalt-0.5.1.tgz 534824 SHA256 c8bca18a7ded7ad4b7070be7478bd046cf2d6a0a81054dfd96ebdba65c0a49d0
diff --git a/sci-biology/ssaha2-bin/Manifest b/sci-biology/ssaha2-bin/Manifest
index 96f932c52..3cd3275a6 100644
--- a/sci-biology/ssaha2-bin/Manifest
+++ b/sci-biology/ssaha2-bin/Manifest
@@ -1,5 +1,5 @@
-DIST samflag.c 2424 RMD160 a338182d756bdcd1214861d6273c0149df5e3177 SHA1 631282cc7fe88bac4f43011a0db09d9a1494859a SHA256 945958214ef1adc40029a6b3c323c37338e095e9e2bcbff5e5ec05aadbdb67d0
-DIST ssaha2-manual.pdf 163188 RMD160 903bc1dc7f7bf89966f957c9df3c82128e233a53 SHA1 8e332b01628a3b64ea3dcc86d654a99d59277934 SHA256 1a0529168b71ac55e13b34264a854daa6a5dac9468f81ccb5b63bd5e1baafdbf
-DIST ssaha2_i686.tgz 288481 RMD160 0c493b917f40f5f259b6a6fe564ebc6a9e4409ec SHA1 b042e36c57f5e89098b6c5f07a2d646c02e76110 SHA256 7d173d763d9f685ef3d0075124bf8b763c6d2d3ed1a1f823bc66d6b6b029abed
-DIST ssaha2_ia64.tgz 458507 RMD160 8c3c821d292db94036f8d93342357ff0a8773bbe SHA1 a7ac847a64240f85eca3aff0df21bf9d339eed8f SHA256 3eb2a31559911f3ee87e11f3b977962da31b60c25ea0c9a064edfd1165b6b5dd
-DIST ssaha2_x86_64.tgz 287790 RMD160 93938da9898f30cf77f020329316228fd47ebe41 SHA1 d16d38e3bdab97994b4a70e4c0fc737a09b94d3a SHA256 0135ab2e285a898d450744b7c9d643efbeb6048783169a6647f310ce2e7b8138
+DIST samflag.c 2424 SHA256 945958214ef1adc40029a6b3c323c37338e095e9e2bcbff5e5ec05aadbdb67d0
+DIST ssaha2-manual.pdf 163188 SHA256 1a0529168b71ac55e13b34264a854daa6a5dac9468f81ccb5b63bd5e1baafdbf
+DIST ssaha2_i686.tgz 288481 SHA256 7d173d763d9f685ef3d0075124bf8b763c6d2d3ed1a1f823bc66d6b6b029abed
+DIST ssaha2_ia64.tgz 458507 SHA256 3eb2a31559911f3ee87e11f3b977962da31b60c25ea0c9a064edfd1165b6b5dd
+DIST ssaha2_x86_64.tgz 287790 SHA256 0135ab2e285a898d450744b7c9d643efbeb6048783169a6647f310ce2e7b8138
diff --git a/sci-biology/swissknife/Manifest b/sci-biology/swissknife/Manifest
index e41db1b2b..a22a78003 100644
--- a/sci-biology/swissknife/Manifest
+++ b/sci-biology/swissknife/Manifest
@@ -1 +1 @@
-DIST Swissknife_1.67.tar.gz 700161 RMD160 cf1eacc71a7bbf03da58047bd22ac233dc0a394d SHA1 6c36448e0dd5b4f5075653c91689d7b9d43de5e0 SHA256 ca1f99be948648e69ea27d51b75a9ca545136f53981cfe2aa6ebe99bf9a74281
+DIST Swissknife_1.67.tar.gz 700161 SHA256 ca1f99be948648e69ea27d51b75a9ca545136f53981cfe2aa6ebe99bf9a74281
diff --git a/sci-biology/tablet-bin/Manifest b/sci-biology/tablet-bin/Manifest
index c28baf7d4..ae6afbe26 100644
--- a/sci-biology/tablet-bin/Manifest
+++ b/sci-biology/tablet-bin/Manifest
@@ -1,3 +1,3 @@
DIST coveragestats.py 4800 SHA256 358b686d00fd75d2cc9af490b0e7d635f74cbb1c0b153df22d8ff879884d47bc SHA512 d5688832c13dc9c2e2e015df0b5c50113f72e2eeae076d479c43b65a4b028f8dcfa5f0fb833b4341d76d3956ea27707c55a51389b73a2efed6abd2b96ccdc3cd WHIRLPOOL 0b1eb20189b343d6014097748c053f35f8ad162400312cfbde16bac7fee52f24ac8b0055e991c823dcb64d7a20df3fbb88d8cd6119f838d4e9a5f26e82604664
-DIST tablet_linux_x86_1_11_05_03.sh 24035425 RMD160 1d36db184cb79b93bd8460e9be293514d7db93d6 SHA1 42580d61f3c725fd357776538484ecc442c2c797 SHA256 3c7de5f0e5d37019485612723dfd3b17fd34e24df8986eb535fcb0335f8b2e99
+DIST tablet_linux_x86_1_11_05_03.sh 24035425 SHA256 3c7de5f0e5d37019485612723dfd3b17fd34e24df8986eb535fcb0335f8b2e99
DIST tablet_linux_x86_1_11_11_01.sh 23481558 SHA256 9dbbd9ecf1c20e39b978a4be88707593c37073407af951cbf7a9b3d16e6daf23 SHA512 95da451959304aafe36c70895cd9f0a89c1749a403e47a4f32b7605e6cbdb5b2f69b03b4177fd6db45cbdba76e2f054742179000d29b0574a1f4541f335aeaa2 WHIRLPOOL cae67ca8338aa23781f91cd235ecc1bd082b04ada80a158d827acf33c04d8bd63e89883790dd3945938e1405c2b6a0903d4e10ffe40c3fe7e0e042390ba1cabe
diff --git a/sci-biology/tclust/Manifest b/sci-biology/tclust/Manifest
index e32f27754..8f245e706 100644
--- a/sci-biology/tclust/Manifest
+++ b/sci-biology/tclust/Manifest
@@ -1,2 +1,2 @@
-DIST gclib-110625.tar.gz 82727 RMD160 f12395354b47980577e9d83cc100a6bf6568bd33 SHA1 4c433e6a87663211dc00e2d855a11a058e5b6b48 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b
-DIST tclust-110625.tar.gz 9521 RMD160 380e9811be58a2ab9659d25ade0b2a89d705c60f SHA1 42dec7cb63b895730babff5522b257c45001b016 SHA256 d222a7109ec135d5e80767046c47aa6d4201ae779e5d516771b377dbbd261798
+DIST gclib-110625.tar.gz 82727 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b
+DIST tclust-110625.tar.gz 9521 SHA256 d222a7109ec135d5e80767046c47aa6d4201ae779e5d516771b377dbbd261798
diff --git a/sci-biology/tgicl/Manifest b/sci-biology/tgicl/Manifest
index 454c56084..0e88d7122 100644
--- a/sci-biology/tgicl/Manifest
+++ b/sci-biology/tgicl/Manifest
@@ -1 +1 @@
-DIST TGICL-2.1.tar.gz 2925009 RMD160 7374261ccd3329662e4a968944e956d8529269c0 SHA1 011cdfa35b132c76c650eb1c2492083736f9d56f SHA256 02682846db9c28a78f5bcfc4ea715dd9e4de8c68b02474d8088831355a3ec989
+DIST TGICL-2.1.tar.gz 2925009 SHA256 02682846db9c28a78f5bcfc4ea715dd9e4de8c68b02474d8088831355a3ec989
diff --git a/sci-biology/tigr-assembler/Manifest b/sci-biology/tigr-assembler/Manifest
index e86184151..b7eaf1ec2 100644
--- a/sci-biology/tigr-assembler/Manifest
+++ b/sci-biology/tigr-assembler/Manifest
@@ -1 +1 @@
-DIST TIGR_Assembler_v2.tar.gz 3252950 RMD160 5b7eaeebf8791acb3b53ab864f6e9c6571c70877 SHA1 8bd1886eb33d203598ac03decc7798a1fa0d85d7 SHA256 b5b660db388788173f7bd9778fe9b1e904bed7f6a464ab6cc92cd4608e70fd42
+DIST TIGR_Assembler_v2.tar.gz 3252950 SHA256 b5b660db388788173f7bd9778fe9b1e904bed7f6a464ab6cc92cd4608e70fd42
diff --git a/sci-biology/tigr-foundation-libs/Manifest b/sci-biology/tigr-foundation-libs/Manifest
index 374dd6686..7033705d8 100644
--- a/sci-biology/tigr-foundation-libs/Manifest
+++ b/sci-biology/tigr-foundation-libs/Manifest
@@ -1 +1 @@
-DIST autoEditor-1.20.tar.gz 2438903 RMD160 598ac977eb424959fc052b4c857ef4487b7e13f9 SHA1 985b5e880148a904b157295053945f9530718d30 SHA256 c0c399eda52a10deb0e0362b4caf909014768a4d08e90c900392cdf712cefd66
+DIST autoEditor-1.20.tar.gz 2438903 SHA256 c0c399eda52a10deb0e0362b4caf909014768a4d08e90c900392cdf712cefd66
diff --git a/sci-biology/tmhmm/Manifest b/sci-biology/tmhmm/Manifest
index 6ad0b5d44..875ce562e 100644
--- a/sci-biology/tmhmm/Manifest
+++ b/sci-biology/tmhmm/Manifest
@@ -1 +1 @@
-DIST tmhmm-2.0c.Linux.tar.gz 191561 RMD160 1fd2f7b1b193196a691c03afbd6ba636d8d47e35 SHA1 69d86e3b1c789bc12d6a9d0acbdeeeb45f8cd3e5 SHA256 761a87ca82c174e0e6660c5065f257ef0b201fab98f934e1342291e4e673ca40
+DIST tmhmm-2.0c.Linux.tar.gz 191561 SHA256 761a87ca82c174e0e6660c5065f257ef0b201fab98f934e1342291e4e673ca40
diff --git a/sci-biology/twinscan/Manifest b/sci-biology/twinscan/Manifest
index c74aa6f13..e9fea6590 100644
--- a/sci-biology/twinscan/Manifest
+++ b/sci-biology/twinscan/Manifest
@@ -1 +1 @@
-DIST iscan-4.1.2.tar_.gz 5894833 RMD160 80cd142ae9cbd44c8d582eac5c13113702c77769 SHA1 86a67f78aba51d4deccdf5583936dd8853c615ff SHA256 30c7e980b2ccbba22a5e2d7ff0d7c1aaeb610cc1cec81432bb30e87f03f7e56a
+DIST iscan-4.1.2.tar_.gz 5894833 SHA256 30c7e980b2ccbba22a5e2d7ff0d7c1aaeb610cc1cec81432bb30e87f03f7e56a
diff --git a/sci-biology/zmsort/Manifest b/sci-biology/zmsort/Manifest
index da6ecde65..73d5e024c 100644
--- a/sci-biology/zmsort/Manifest
+++ b/sci-biology/zmsort/Manifest
@@ -1,2 +1,2 @@
-DIST gclib-110625.tar.gz 82727 RMD160 f12395354b47980577e9d83cc100a6bf6568bd33 SHA1 4c433e6a87663211dc00e2d855a11a058e5b6b48 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b
-DIST zmsort-110625.tar.gz 6192 RMD160 ccd1996ac194ee9b34044f585b3a82b94e07b7d5 SHA1 d0f0adca786f33329c5be93740ba9910c09c64d6 SHA256 8267592ec5ddb070a5feb07fcf475ce13ec28cdda33d685a218098bd6bc2962f
+DIST gclib-110625.tar.gz 82727 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b
+DIST zmsort-110625.tar.gz 6192 SHA256 8267592ec5ddb070a5feb07fcf475ce13ec28cdda33d685a218098bd6bc2962f
diff --git a/sci-chemistry/almost/Manifest b/sci-chemistry/almost/Manifest
index ecf3e3521..9f875f16a 100644
--- a/sci-chemistry/almost/Manifest
+++ b/sci-chemistry/almost/Manifest
@@ -1 +1 @@
-DIST almost-1.0.3-090822.tar.gz 10973194 RMD160 e1aaa736cc063275ecca347e4f483d5787bc2db3 SHA1 b8565ff71fb65e9f7e615050f1995b9cdd3087d0 SHA256 1e6351cc9de342c2d1ce64b4c44b66b482f7c2267dc0eca39ca2452e7b33422a
+DIST almost-1.0.3-090822.tar.gz 10973194 SHA256 1e6351cc9de342c2d1ce64b4c44b66b482f7c2267dc0eca39ca2452e7b33422a
diff --git a/sci-chemistry/bist/Manifest b/sci-chemistry/bist/Manifest
index d779216a2..2f26c7cac 100644
--- a/sci-chemistry/bist/Manifest
+++ b/sci-chemistry/bist/Manifest
@@ -1 +1 @@
-DIST bist-0.5.1.tar.gz 766731 RMD160 a848cf778c9096239ca964dce352eeeab1ee4dc2 SHA1 22fd8186ef3a4fcc2776a3cf5b57ca78bfb4ab69 SHA256 78809230e2bcfffefaf8f95d85740d94cf2d10b4dd0d746f28cf1e82e4fc6cd5
+DIST bist-0.5.1.tar.gz 766731 SHA256 78809230e2bcfffefaf8f95d85740d94cf2d10b4dd0d746f28cf1e82e4fc6cd5
diff --git a/sci-chemistry/cnsface/Manifest b/sci-chemistry/cnsface/Manifest
index 149098d78..b1bdb72df 100644
--- a/sci-chemistry/cnsface/Manifest
+++ b/sci-chemistry/cnsface/Manifest
@@ -1 +1 @@
-DIST cnsface-0.0.12-altoona.tar.gz 1442309 RMD160 7e6a6cdb23b83325beb00184db5f4ff98d1a09f9 SHA1 900d44bbd7f2d901f5b0ff9825a45f354f1aedbd SHA256 add1a1f17fc103a5bb3a75003d8c0e64626b35c6ebbb8e2aa87fed1a0c05b655
+DIST cnsface-0.0.12-altoona.tar.gz 1442309 SHA256 add1a1f17fc103a5bb3a75003d8c0e64626b35c6ebbb8e2aa87fed1a0c05b655
diff --git a/sci-chemistry/direx/Manifest b/sci-chemistry/direx/Manifest
index 039394f8b..e7dcabfd8 100644
--- a/sci-chemistry/direx/Manifest
+++ b/sci-chemistry/direx/Manifest
@@ -1 +1 @@
-DIST direx-0.2-rev92-linux.tgz 1096211 RMD160 3ef7df21d8b4fce25a67ff21c23d1739e4f4fcc5 SHA1 5b2bbf2affe7f6083c1a17323dd322db90f39d3f SHA256 567741da0d94db38ca0576b73498c3e5667e8d5bb8b7241d9dc5664eca91a23b
+DIST direx-0.2-rev92-linux.tgz 1096211 SHA256 567741da0d94db38ca0576b73498c3e5667e8d5bb8b7241d9dc5664eca91a23b
diff --git a/sci-chemistry/drawxtl/Manifest b/sci-chemistry/drawxtl/Manifest
index 77b55ac04..d9075726f 100644
--- a/sci-chemistry/drawxtl/Manifest
+++ b/sci-chemistry/drawxtl/Manifest
@@ -1,2 +1,2 @@
-DIST DRAWxtl44.tar.gz 4214313 RMD160 c4a4dbc14eb67b9f28768715eadd62b96d7e494d SHA1 f9e235ff044f01fed8146321f562eb833b78c824 SHA256 6fc92098290bcf319f8b3002d017d83d052e276693d012d84c75e3c0ff319c92
-DIST DRAWxtl54.tar.gz 4284006 RMD160 78b8b0241a492964355c808959eb6e4a8b03339c SHA1 476c7950ca901d13b20058c71bb86fa5d7be8fa2 SHA256 6bf11e7a0aff0a32daef54b9d90f6ffe88ba3b1a61ff2f9f8aa1dfc85b2660d6
+DIST DRAWxtl44.tar.gz 4214313 SHA256 6fc92098290bcf319f8b3002d017d83d052e276693d012d84c75e3c0ff319c92
+DIST DRAWxtl54.tar.gz 4284006 SHA256 6bf11e7a0aff0a32daef54b9d90f6ffe88ba3b1a61ff2f9f8aa1dfc85b2660d6
diff --git a/sci-chemistry/dssp2pdb/Manifest b/sci-chemistry/dssp2pdb/Manifest
index 938a56a09..85549c3fd 100644
--- a/sci-chemistry/dssp2pdb/Manifest
+++ b/sci-chemistry/dssp2pdb/Manifest
@@ -1 +1 @@
-DIST dssp2pdb-0.03.tar 10240 RMD160 eab385645aec1016045ea536ff4805423b90687e SHA1 e950f5c2e2cac69e58af7d6cf41b025b4faf61bd SHA256 4ec79fdd7223a6125d5ab221438ca9d9747e293c37bcfc5b67981e678280ec61
+DIST dssp2pdb-0.03.tar 10240 SHA256 4ec79fdd7223a6125d5ab221438ca9d9747e293c37bcfc5b67981e678280ec61
diff --git a/sci-chemistry/jana2000/Manifest b/sci-chemistry/jana2000/Manifest
index 06453a857..f0c17364b 100644
--- a/sci-chemistry/jana2000/Manifest
+++ b/sci-chemistry/jana2000/Manifest
@@ -1 +1 @@
-DIST jana2000.tar.gz 3261905 RMD160 dd61f0f65da066b61b91d3ad69d045705a894e93 SHA1 0a0851e8340bb3f37ee881fa94a581a19d04d8ea SHA256 4b1369889882d4a9b3331c870a37d76ec9aeee94a9959581b08dbb1f8f4bf71a
+DIST jana2000.tar.gz 3261905 SHA256 4b1369889882d4a9b3331c870a37d76ec9aeee94a9959581b08dbb1f8f4bf71a
diff --git a/sci-chemistry/jmol/Manifest b/sci-chemistry/jmol/Manifest
index 21c4e130b..2f111a747 100644
--- a/sci-chemistry/jmol/Manifest
+++ b/sci-chemistry/jmol/Manifest
@@ -1 +1 @@
-DIST Jmol-12.0.45-full.tar.gz 26501382 RMD160 0d9a4212abf45852706f92cb16aedae7632763c5 SHA1 c43b0542be8bd845dadbcacdd41e47482e23fe03 SHA256 f9a3fe242841f9b56a718f8da2efe4130e497afe2c12d77f2e68344c62d7f70e
+DIST Jmol-12.0.45-full.tar.gz 26501382 SHA256 f9a3fe242841f9b56a718f8da2efe4130e497afe2c12d77f2e68344c62d7f70e
diff --git a/sci-chemistry/mage/Manifest b/sci-chemistry/mage/Manifest
index 08418f2ee..5bcae5fc9 100644
--- a/sci-chemistry/mage/Manifest
+++ b/sci-chemistry/mage/Manifest
@@ -1 +1 @@
-DIST mage.6.44.060606.src.tgz 726357 RMD160 08305d65dd61ed573c67e58975a611439235e9f5 SHA1 8a7be20b9f664fcd94b94b77935a58017cc1ae2e SHA256 c812202138cfee6b6434c51206286d460e83a12828e694013ecb16f2d5e839b3
+DIST mage.6.44.060606.src.tgz 726357 SHA256 c812202138cfee6b6434c51206286d460e83a12828e694013ecb16f2d5e839b3
diff --git a/sci-chemistry/modeller/Manifest b/sci-chemistry/modeller/Manifest
index 603783bc2..f3078a1c8 100644
--- a/sci-chemistry/modeller/Manifest
+++ b/sci-chemistry/modeller/Manifest
@@ -1 +1 @@
-DIST modeller-9v8.tar.gz 51539572 RMD160 455a1506b04608a797317386524fa44b6af9a2d7 SHA1 41ae0c85df512a4646bdcc2ee537e041dfe4bf8b SHA256 3d5c629f97a2b89722fe5b7414ad97b0361799714db0323536df45f55b2777c7
+DIST modeller-9v8.tar.gz 51539572 SHA256 3d5c629f97a2b89722fe5b7414ad97b0361799714db0323536df45f55b2777c7
diff --git a/sci-chemistry/mtz2hkl/Manifest b/sci-chemistry/mtz2hkl/Manifest
index 7683e5862..17e38a28c 100644
--- a/sci-chemistry/mtz2hkl/Manifest
+++ b/sci-chemistry/mtz2hkl/Manifest
@@ -1 +1 @@
-DIST mtz2hkl_v0.3.tar.gz 11284 RMD160 a21355254ca18fd7b57bf704a44ce8a23dacce84 SHA1 eea1e0c075d1ff9edb784ac19ba9363b3054a455 SHA256 10109ef7659acea7ab2b75b18dae00f7bb29907b579523d8735c0621b4924cce
+DIST mtz2hkl_v0.3.tar.gz 11284 SHA256 10109ef7659acea7ab2b75b18dae00f7bb29907b579523d8735c0621b4924cce
diff --git a/sci-chemistry/mtz2sca/Manifest b/sci-chemistry/mtz2sca/Manifest
index a54d63a4f..470ebbe2c 100644
--- a/sci-chemistry/mtz2sca/Manifest
+++ b/sci-chemistry/mtz2sca/Manifest
@@ -1 +1 @@
-DIST mtz2sca_v0.3.tar.gz 17190 RMD160 56f02520198a964ee49a685bbf4900b4f28823cf SHA1 08e8e2723ab4588a162f31bed7ad0342f73eb255 SHA256 05a2bd7b34f9edba10ded3e7627cf1a7ea312b80f746186b579ebcfefeb18ac1
+DIST mtz2sca_v0.3.tar.gz 17190 SHA256 05a2bd7b34f9edba10ded3e7627cf1a7ea312b80f746186b579ebcfefeb18ac1
diff --git a/sci-chemistry/phaser/Manifest b/sci-chemistry/phaser/Manifest
index eb482567e..eb8b8c568 100644
--- a/sci-chemistry/phaser/Manifest
+++ b/sci-chemistry/phaser/Manifest
@@ -1 +1 @@
-DIST phaser-2.1.4-cctbx-src.tar.gz 22388206 RMD160 65d65411ceb98f678488265c10e4159150db80ce SHA1 f388eb39b834f013e5120a82c34000a5fdd5e060 SHA256 594829cc82cb3c57e223ded99faf1fe86b192f2b48a935f93d2a4b89b9018970
+DIST phaser-2.1.4-cctbx-src.tar.gz 22388206 SHA256 594829cc82cb3c57e223ded99faf1fe86b192f2b48a935f93d2a4b89b9018970
diff --git a/sci-chemistry/polygon/Manifest b/sci-chemistry/polygon/Manifest
index 4f5ddd809..693c1c379 100644
--- a/sci-chemistry/polygon/Manifest
+++ b/sci-chemistry/polygon/Manifest
@@ -1,2 +1,2 @@
-DIST pdb_2009-04-29_ord.zip 4371434 RMD160 dbe9100a0411d75d9ce5b26d4adf5a8163598df2 SHA1 99e2043edb54bf89570cfd531439f2ea8b19fedf SHA256 cd949ded9c7c656e4cc9d5f9c28584b648fec3bd2df2e80811ea8eb7baf81f69
-DIST polygon0710.tcl 128282 RMD160 5a109ff3796dbaada367f219a83058a0dda350d5 SHA1 fc5ffd27639902fc9eb7619c92053835fe258068 SHA256 db1b985805c750550328d0092bbf826c30df68e38453f2866329fd96cbfe45d8
+DIST pdb_2009-04-29_ord.zip 4371434 SHA256 cd949ded9c7c656e4cc9d5f9c28584b648fec3bd2df2e80811ea8eb7baf81f69
+DIST polygon0710.tcl 128282 SHA256 db1b985805c750550328d0092bbf826c30df68e38453f2866329fd96cbfe45d8
diff --git a/sci-chemistry/pyquante/Manifest b/sci-chemistry/pyquante/Manifest
index 1d6a7f240..02e7d8362 100644
--- a/sci-chemistry/pyquante/Manifest
+++ b/sci-chemistry/pyquante/Manifest
@@ -1 +1 @@
-DIST PyQuante-1.6.3.tar.gz 329029 RMD160 40f3178a40389a7d1781518deb2b400b04421527 SHA1 55a5832451588589dd932eab2cb8a317c5615d1f SHA256 9bba2d6eefebbb3f2296c69e8b8c9714d8ac1689abaf4ce9468441d19c1e9d20
+DIST PyQuante-1.6.3.tar.gz 329029 SHA256 9bba2d6eefebbb3f2296c69e8b8c9714d8ac1689abaf4ce9468441d19c1e9d20
diff --git a/sci-chemistry/rosetta-tools/Manifest b/sci-chemistry/rosetta-tools/Manifest
index 7a488d86b..912e8c895 100644
--- a/sci-chemistry/rosetta-tools/Manifest
+++ b/sci-chemistry/rosetta-tools/Manifest
@@ -1 +1 @@
-DIST BioTools-3.0.tgz 41121 RMD160 cd248ed57181eb59dad99fc314e14c702496254b SHA1 e3f197b975653a609b1c6f98f1d1670e61996a68 SHA256 363689571fd131ba0e9b4fdbe239868c3a78b7104270f5b2d0285b0f96af4f9c
+DIST BioTools-3.0.tgz 41121 SHA256 363689571fd131ba0e9b4fdbe239868c3a78b7104270f5b2d0285b0f96af4f9c
diff --git a/sci-chemistry/shiftx/Manifest b/sci-chemistry/shiftx/Manifest
index 6e598786e..01ee9e803 100644
--- a/sci-chemistry/shiftx/Manifest
+++ b/sci-chemistry/shiftx/Manifest
@@ -1 +1 @@
-DIST shiftx.tar.gz 318768 RMD160 1fed3bb1cb4988a0748751cd3568d1a560fa812b SHA1 5d40e818e49ae53a7b740181b3660c622af66229 SHA256 2a4b00adfc39d39d2f28c09f78e3c9c7ab8b28e96c4e5efcdffeedfac00ab1ef
+DIST shiftx.tar.gz 318768 SHA256 2a4b00adfc39d39d2f28c09f78e3c9c7ab8b28e96c4e5efcdffeedfac00ab1ef
diff --git a/sci-chemistry/smmp/Manifest b/sci-chemistry/smmp/Manifest
index e3ad23b24..879b9f85b 100644
--- a/sci-chemistry/smmp/Manifest
+++ b/sci-chemistry/smmp/Manifest
@@ -1 +1 @@
-DIST SMMP-3.0.5.tar.bz2 233378 RMD160 a951eb826c3af743aae4156fb21bffe028d68846 SHA1 fda498e9aac93efcf57787da4aa190ec3f70f1c7 SHA256 70d6b719d2c2ef1d34fd9897ad1c89a37c4d7531d80c904eee39dc8855aca31c
+DIST SMMP-3.0.5.tar.bz2 233378 SHA256 70d6b719d2c2ef1d34fd9897ad1c89a37c4d7531d80c904eee39dc8855aca31c
diff --git a/sci-chemistry/unio/Manifest b/sci-chemistry/unio/Manifest
index a534af690..351f72d58 100644
--- a/sci-chemistry/unio/Manifest
+++ b/sci-chemistry/unio/Manifest
@@ -1,2 +1,2 @@
-DIST UNIO10-Distribution21Dec2011.tar.gz 58020621 RMD160 0cd0860fcdc342ffd11378c19b30150cc4988144 SHA1 1d8393167fad26f6fe173523cf5d4a6df16f2cb8 SHA256 e0964de2d37907e8ceafb5884896fb26c0a2ff1772530a601eaab66d4e8d90a6
-DIST UNIO10-Distribution30Sept2010.tar.gz 57906625 RMD160 733c64f2015ed6bd637ba140cd6b7c5eb51eb210 SHA1 6ebe7244ce25a3579b834b57985fc9ed06f7ca2c SHA256 da5d88153d03b4e286da4fcb8ca79b19692a3775d5a430aa334b733937f1a535
+DIST UNIO10-Distribution21Dec2011.tar.gz 58020621 SHA256 e0964de2d37907e8ceafb5884896fb26c0a2ff1772530a601eaab66d4e8d90a6
+DIST UNIO10-Distribution30Sept2010.tar.gz 57906625 SHA256 da5d88153d03b4e286da4fcb8ca79b19692a3775d5a430aa334b733937f1a535
diff --git a/sci-electronics/player/Manifest b/sci-electronics/player/Manifest
index 6c83ff7d7..300ca2402 100644
--- a/sci-electronics/player/Manifest
+++ b/sci-electronics/player/Manifest
@@ -1 +1 @@
-DIST player-2.0.4.tar.bz2 1707996 RMD160 8b70fef48595afcf9fafe24cf57f7a3fa9ba8628 SHA1 96ae46abe9a81cab045b2a9ae6479a44fc6f2ac2 SHA256 615225f22e0585df2a5fdf9adaddbe6e2a9ca25f1015607f51a47023fcc2cdf9
+DIST player-2.0.4.tar.bz2 1707996 SHA256 615225f22e0585df2a5fdf9adaddbe6e2a9ca25f1015607f51a47023fcc2cdf9
diff --git a/sci-electronics/stage/Manifest b/sci-electronics/stage/Manifest
index 5210fb278..729e06304 100644
--- a/sci-electronics/stage/Manifest
+++ b/sci-electronics/stage/Manifest
@@ -1 +1 @@
-DIST stage-2.0.3.tar.bz2 451664 RMD160 4f22d8c423de37d70e099a6593a94ab2f8eaf021 SHA1 2595fa2b004cc81fcdd89d1630bffa55304c7522 SHA256 7a9619f5ef633d18a11900da1e59e807547180fce4420bb9e9b4c681ddbe6c83
+DIST stage-2.0.3.tar.bz2 451664 SHA256 7a9619f5ef633d18a11900da1e59e807547180fce4420bb9e9b4c681ddbe6c83
diff --git a/sci-electronics/tnt/Manifest b/sci-electronics/tnt/Manifest
index d89cb7158..26b6fc015 100644
--- a/sci-electronics/tnt/Manifest
+++ b/sci-electronics/tnt/Manifest
@@ -1 +1 @@
-DIST tnt-1.2.2.tar.gz 2020099 RMD160 1a2ba68a93ee21590bb25a3eacf85d3773c3e77d SHA1 bd089863ca2cd939009253e83f4ab75317191047 SHA256 cbb418d0de4f244d8174e8826e4d8272bce753f50431c9d87af08928f5817445
+DIST tnt-1.2.2.tar.gz 2020099 SHA256 cbb418d0de4f244d8174e8826e4d8272bce753f50431c9d87af08928f5817445
diff --git a/sci-geosciences/cdat-lite/Manifest b/sci-geosciences/cdat-lite/Manifest
index 005ee23af..410f7df59 100644
--- a/sci-geosciences/cdat-lite/Manifest
+++ b/sci-geosciences/cdat-lite/Manifest
@@ -1,2 +1,2 @@
-DIST cdat_lite-5.2.tar.gz 3454154 RMD160 2a8da3f66eb97282674551dcc9cc9a31dedff5da SHA1 2d58a32a88ed168d18aca631dcbd017d87204531 SHA256 72e851d61d9f8be5d744b346ccbb16a757809f723e332ed09703bfaeb8c84bd7
-DIST cdat_lite-6.0rc2.tar.gz 3563402 RMD160 d6683adca3a897c18f9d5415a1e422c28b66fc9e SHA1 239fee5bf25f14a6afd0882d889ba05fb64ce518 SHA256 6cbfdf9b47fdbc189ca7d2819dafb6cf958116e0f6077b325c375a0ddfab2a95
+DIST cdat_lite-5.2.tar.gz 3454154 SHA256 72e851d61d9f8be5d744b346ccbb16a757809f723e332ed09703bfaeb8c84bd7
+DIST cdat_lite-6.0rc2.tar.gz 3563402 SHA256 6cbfdf9b47fdbc189ca7d2819dafb6cf958116e0f6077b325c375a0ddfab2a95
diff --git a/sci-geosciences/congen/Manifest b/sci-geosciences/congen/Manifest
index 54c7abd9e..43b44ab3e 100644
--- a/sci-geosciences/congen/Manifest
+++ b/sci-geosciences/congen/Manifest
@@ -1 +1 @@
-DIST congen-1.6.tar.bz2 243967 RMD160 fb8a474753612a2b83d59d03a9daae43452d6cd2 SHA1 564e4217087791ba49edf68512e7ca93b797174f SHA256 162f7563fdf13a307745eaa4261df5bd46f74bbc29cfdadefbe8af1f6bb641b3
+DIST congen-1.6.tar.bz2 243967 SHA256 162f7563fdf13a307745eaa4261df5bd46f74bbc29cfdadefbe8af1f6bb641b3
diff --git a/sci-geosciences/harmonics-dwf-free-noncomm/Manifest b/sci-geosciences/harmonics-dwf-free-noncomm/Manifest
index 1a6a70244..2fc99df39 100644
--- a/sci-geosciences/harmonics-dwf-free-noncomm/Manifest
+++ b/sci-geosciences/harmonics-dwf-free-noncomm/Manifest
@@ -1 +1 @@
-DIST harmonics-dwf-20110410-nonfree.tar.bz2 308042 RMD160 8ab7776b746e4295bff2b0ab5788ccf07b7c0ea1 SHA1 0c5ee637ebedec3e71c67888ce354c1cdab0c8ac SHA256 31b58f73cf5e15496e4279e5a8ba480c2cc1190bc29524a21a634efde9839952
+DIST harmonics-dwf-20110410-nonfree.tar.bz2 308042 SHA256 31b58f73cf5e15496e4279e5a8ba480c2cc1190bc29524a21a634efde9839952
diff --git a/sci-geosciences/harmonics-dwf-free/Manifest b/sci-geosciences/harmonics-dwf-free/Manifest
index abe78cf13..9dd11981c 100644
--- a/sci-geosciences/harmonics-dwf-free/Manifest
+++ b/sci-geosciences/harmonics-dwf-free/Manifest
@@ -1,2 +1,2 @@
-DIST harmonics-dwf-20110410-free.tar.bz2 495106 RMD160 43a788ce9864236d45087ba6ba0a9c6b8287c07d SHA1 9a33ade09c5ba0a6db007adb4075f7b1475b1130 SHA256 1e0a0a64d498611c2bbd5af8da5fb261346553c7d6cc0379655ebee658e2ca1d
-DIST harmonics-dwf-20120302-free.tar.bz2 503459 RMD160 29f2aca3469374f2a4fc3332b800306e88b65273 SHA1 291f45a81a41a314a8194d8c049a8d977591ede3 SHA256 3d562d71dfb2b7f9a025ca5444607e1433d14ada112a375631ab8a823c870cb7 SHA512 47040110aa34bb4e10969e86a7f6f8e1e7ba6d2b5f319c759b929cac1f51c66353641443856588691e587a16e236bdd1263043d4dd9873b23f6d993b66f2b31f WHIRLPOOL 07112c59a7c3d57823e250c28d3cb2a8d014f23a4a163822ad5fa1d7cc0ee06e46792a05e40a80d5e093da8899b48fc753c362ddf8800c59af566fc0135dd158
+DIST harmonics-dwf-20110410-free.tar.bz2 495106 SHA256 1e0a0a64d498611c2bbd5af8da5fb261346553c7d6cc0379655ebee658e2ca1d
+DIST harmonics-dwf-20120302-free.tar.bz2 503459 SHA256 3d562d71dfb2b7f9a025ca5444607e1433d14ada112a375631ab8a823c870cb7 SHA512 47040110aa34bb4e10969e86a7f6f8e1e7ba6d2b5f319c759b929cac1f51c66353641443856588691e587a16e236bdd1263043d4dd9873b23f6d993b66f2b31f WHIRLPOOL 07112c59a7c3d57823e250c28d3cb2a8d014f23a4a163822ad5fa1d7cc0ee06e46792a05e40a80d5e093da8899b48fc753c362ddf8800c59af566fc0135dd158
diff --git a/sci-geosciences/libtcd/Manifest b/sci-geosciences/libtcd/Manifest
index cc0f248c6..8354c65be 100644
--- a/sci-geosciences/libtcd/Manifest
+++ b/sci-geosciences/libtcd/Manifest
@@ -1,2 +1,2 @@
-DIST libtcd-2.2.5-r2.tar.bz2 294449 RMD160 a6fe9fd12eee4e7590871f65ceb9789cd5b156bf SHA1 e4f17f814c8567a99499867dc11fbc3813466517 SHA256 021d9f87986d41aa52c5318c04c49a36e6e122f6b1d16f1d91b82438ff8e767c SHA512 125b8f4258c576d82f86f75c9dec4e6e0dba8d46e897835ff8ee57cb58495c3f2ae42040719aa8a6f0fa70be40dbc3eb082250cfa197f15f0b23d2ee37a47fbd WHIRLPOOL 136c829b564382d0cbc07cdcf6fec885f7da67d2a1fade9405d5fe105d4c9274796d8efde22dc4e1f2697f5690775a17f2b6c7275ec809edb643a3669856ebfe
-DIST libtcd-2.2.5.tar.bz2 271494 RMD160 591473a7e95cecd09f773f414bbeea6424966397 SHA1 03f869ae97ee7e5f3eccc81b467c92469690c98d SHA256 83d8b5661673eb841417e9aa7b14b3c1d233a6adf836c7d21805ff376165a1d6 SHA512 db5e6972038d931d6b5b7ce5e3fa19301fedc509aeb27d9a4c72accf93ff8d1be7cb9591bf5e0acfd5ed6ebf789a67ffb73e2ccb735c3c84ad6190d6228d86ea WHIRLPOOL 6aa1bf5369c5b798b29fc7f0080cdffbc1173ce111b56475e80ef46bbbbce046344f7a7bad2cb65636c774afff0805a6d5fe9d7c23cdbf68bb6ff47051d68099
+DIST libtcd-2.2.5-r2.tar.bz2 294449 SHA256 021d9f87986d41aa52c5318c04c49a36e6e122f6b1d16f1d91b82438ff8e767c SHA512 125b8f4258c576d82f86f75c9dec4e6e0dba8d46e897835ff8ee57cb58495c3f2ae42040719aa8a6f0fa70be40dbc3eb082250cfa197f15f0b23d2ee37a47fbd WHIRLPOOL 136c829b564382d0cbc07cdcf6fec885f7da67d2a1fade9405d5fe105d4c9274796d8efde22dc4e1f2697f5690775a17f2b6c7275ec809edb643a3669856ebfe
+DIST libtcd-2.2.5.tar.bz2 271494 SHA256 83d8b5661673eb841417e9aa7b14b3c1d233a6adf836c7d21805ff376165a1d6 SHA512 db5e6972038d931d6b5b7ce5e3fa19301fedc509aeb27d9a4c72accf93ff8d1be7cb9591bf5e0acfd5ed6ebf789a67ffb73e2ccb735c3c84ad6190d6228d86ea WHIRLPOOL 6aa1bf5369c5b798b29fc7f0080cdffbc1173ce111b56475e80ef46bbbbce046344f7a7bad2cb65636c774afff0805a6d5fe9d7c23cdbf68bb6ff47051d68099
diff --git a/sci-geosciences/seawater/Manifest b/sci-geosciences/seawater/Manifest
index 412028cc1..7d56f7af3 100644
--- a/sci-geosciences/seawater/Manifest
+++ b/sci-geosciences/seawater/Manifest
@@ -1 +1 @@
-DIST seawater-2.0.1.tar.gz 2680741 RMD160 1fa8150c48b9a18ede83ce6027aa1eddf47e8ca9 SHA1 718c3bdb4811150c6b3c32b5b480852bee8721fc SHA256 e343ef9dba9cc5806b4040af5a63132e2d04bab6406216d5041f81f76d4b25cf
+DIST seawater-2.0.1.tar.gz 2680741 SHA256 e343ef9dba9cc5806b4040af5a63132e2d04bab6406216d5041f81f76d4b25cf
diff --git a/sci-geosciences/swmm/Manifest b/sci-geosciences/swmm/Manifest
index 55d1cf111..6d5605973 100644
--- a/sci-geosciences/swmm/Manifest
+++ b/sci-geosciences/swmm/Manifest
@@ -1 +1 @@
-DIST swmm50022_engine.zip 338011 RMD160 a5a1fc05ede4d3f912b96abc2e7e99233598325d SHA1 6318b4092785883f5490d3337c1ef2d85f41c68d SHA256 4dba36cbe5e39524c06b826e265ae8fdd2afb82b1c63bb5d9fd72214ed2d7409
+DIST swmm50022_engine.zip 338011 SHA256 4dba36cbe5e39524c06b826e265ae8fdd2afb82b1c63bb5d9fd72214ed2d7409
diff --git a/sci-geosciences/tappy/Manifest b/sci-geosciences/tappy/Manifest
index 94470b737..a1019cb02 100644
--- a/sci-geosciences/tappy/Manifest
+++ b/sci-geosciences/tappy/Manifest
@@ -1 +1 @@
-DIST tappy-0.9.0.tar.gz 1250867 RMD160 dc1d21de8566c5b6b404a6ecbdbb1c38dbb622b4 SHA1 97fd9d20accd272eee7b99f3a87ce670622b3a73 SHA256 273dce2595a0c2161752d9cb26e4e2569d6f42028cdf0b418c90775ff2443bf0
+DIST tappy-0.9.0.tar.gz 1250867 SHA256 273dce2595a0c2161752d9cb26e4e2569d6f42028cdf0b418c90775ff2443bf0
diff --git a/sci-geosciences/tcd-utils/Manifest b/sci-geosciences/tcd-utils/Manifest
index c4301ad82..e4da25106 100644
--- a/sci-geosciences/tcd-utils/Manifest
+++ b/sci-geosciences/tcd-utils/Manifest
@@ -1,2 +1,2 @@
-DIST tcd-utils-20061127.tar.bz2 111453 RMD160 77d7f062ef2211d7f10f43d7c51e1b3e7f7a7e61 SHA1 2f782ec1f5df2829a29726c454ca7f16ac7701df SHA256 3ebe4a4c7c5d59523fb3e9f8b392b8b68400a9d6ab4bb3d0ba8981a3fa1fb867
-DIST tcd-utils-20080820.tar.bz2 111300 RMD160 a52c0d800fdb3e0c66a05262c1652cf4163489b3 SHA1 672201fcf92379a51b0467f428ed4362769cf65a SHA256 61912e793ab58cd396c77721743f648f40b3806a05dbb1229b015fada0643260
+DIST tcd-utils-20061127.tar.bz2 111453 SHA256 3ebe4a4c7c5d59523fb3e9f8b392b8b68400a9d6ab4bb3d0ba8981a3fa1fb867
+DIST tcd-utils-20080820.tar.bz2 111300 SHA256 61912e793ab58cd396c77721743f648f40b3806a05dbb1229b015fada0643260
diff --git a/sci-geosciences/xtide/Manifest b/sci-geosciences/xtide/Manifest
index 950f217bc..939bcaf0b 100644
--- a/sci-geosciences/xtide/Manifest
+++ b/sci-geosciences/xtide/Manifest
@@ -1,2 +1,2 @@
-DIST xtide-2.12.tar.bz2 439317 RMD160 f329da07e18c6a57aaf103a06de46d4361687c2c SHA1 dd3a4e05848a2d37a149c1306e43863643b663af SHA256 494d398ea1829af4834c68a002cb2b2c73d94966949385c17613d823deb3c0d6
-DIST xtide-2.13.tar.bz2 465679 RMD160 732a535be62d3db63181c1b2a1d61a1638727a4c SHA1 ccba684cc4006d7d0eef842f4014f5a21e6af9f1 SHA256 a73c530c83a9346bf85fe9545551eef3fbedfb24adf18f63c9e7dba0388e0d0a SHA512 2324d3f5150a46ea1fd6c2af3379c8ea4f147034f153ac4b0393ef3aaa2178bfdafc01499f27db643b5ec78b4825c99b20957f5e47f6174fe1612480dc79dcd1 WHIRLPOOL af9fe8377fec84a449e06cfac542b2d792ebe1df904e036775b3e5b659e874d5193e0416b061dddcffc2419610d48864207bba27d557fe05fdcd7560c20afb53
+DIST xtide-2.12.tar.bz2 439317 SHA256 494d398ea1829af4834c68a002cb2b2c73d94966949385c17613d823deb3c0d6
+DIST xtide-2.13.tar.bz2 465679 SHA256 a73c530c83a9346bf85fe9545551eef3fbedfb24adf18f63c9e7dba0388e0d0a SHA512 2324d3f5150a46ea1fd6c2af3379c8ea4f147034f153ac4b0393ef3aaa2178bfdafc01499f27db643b5ec78b4825c99b20957f5e47f6174fe1612480dc79dcd1 WHIRLPOOL af9fe8377fec84a449e06cfac542b2d792ebe1df904e036775b3e5b659e874d5193e0416b061dddcffc2419610d48864207bba27d557fe05fdcd7560c20afb53
diff --git a/sci-libs/calculix-cgx/Manifest b/sci-libs/calculix-cgx/Manifest
index 8ef5388c6..be885dcc9 100644
--- a/sci-libs/calculix-cgx/Manifest
+++ b/sci-libs/calculix-cgx/Manifest
@@ -1,2 +1,2 @@
-DIST cgx_2.2.all.tar.bz2 1357357 RMD160 de2265dcfb8c9518d4dfec1e5df212f58f416529 SHA1 f768c42ec26de675c1cb76a90234160825314f32 SHA256 216a1102ac3d7765d10f1f4c78db11e974e50615d6cf08b4019000b6119a019a
-DIST cgx_2.2.ps.bz2 356718 RMD160 a488fca7e380bb3794bd0440da2a13d2d4a88797 SHA1 0e39562f174010bade5147ec051391330e345f86 SHA256 29ca4ac8bf613782eacc268084a0b2db5c6b4fdf14e345280d55a20d8754213b
+DIST cgx_2.2.all.tar.bz2 1357357 SHA256 216a1102ac3d7765d10f1f4c78db11e974e50615d6cf08b4019000b6119a019a
+DIST cgx_2.2.ps.bz2 356718 SHA256 29ca4ac8bf613782eacc268084a0b2db5c6b4fdf14e345280d55a20d8754213b
diff --git a/sci-libs/cgnsfoam/Manifest b/sci-libs/cgnsfoam/Manifest
index faf491d38..dc157fe6f 100644
--- a/sci-libs/cgnsfoam/Manifest
+++ b/sci-libs/cgnsfoam/Manifest
@@ -1 +1 @@
-DIST cgnsfoam_1732.orig.tar.gz 48420 RMD160 2f3cd7076049a9e80d360383436879ea1c813c0b SHA1 f0864da7587ba0b429f117ce34a41f88ff8d364b SHA256 46a105bef7c068642f7eda66605b48f8d593b87f05369f3e397634a3c493fbae
+DIST cgnsfoam_1732.orig.tar.gz 48420 SHA256 46a105bef7c068642f7eda66605b48f8d593b87f05369f3e397634a3c493fbae
diff --git a/sci-libs/cgnslib/Manifest b/sci-libs/cgnslib/Manifest
index ba8b71c8a..4ed6e444e 100644
--- a/sci-libs/cgnslib/Manifest
+++ b/sci-libs/cgnslib/Manifest
@@ -1 +1 @@
-DIST cgnslib_2.5-4.tar.gz 398419 RMD160 1215e928bf5fe282637252661fd95e8a67dc89ed SHA1 d5f99f6df7409d923d8703fc3732b13bd1d89b20 SHA256 0485b32649f1e15de2e85a17f0cb2b5fe4d2522415eafe1f6c8cfa4820719964
+DIST cgnslib_2.5-4.tar.gz 398419 SHA256 0485b32649f1e15de2e85a17f0cb2b5fe4d2522415eafe1f6c8cfa4820719964
diff --git a/sci-libs/cnsface-scripts/Manifest b/sci-libs/cnsface-scripts/Manifest
index 3d6312d5c..45d49a677 100644
--- a/sci-libs/cnsface-scripts/Manifest
+++ b/sci-libs/cnsface-scripts/Manifest
@@ -1 +1 @@
-DIST cnsface-scripts-0.1-mercury.tar.gz 154932 RMD160 8149c4e29c0e2361fe34aae53071234d3a61d3ff SHA1 8bda13a5d1f9199ea104121e2bc7417b8a2aa4fa SHA256 93dd6fa62a37b513c37d2bcf6d6246565bc75297c9ac8807a9d77020e2283413
+DIST cnsface-scripts-0.1-mercury.tar.gz 154932 SHA256 93dd6fa62a37b513c37d2bcf6d6246565bc75297c9ac8807a9d77020e2283413
diff --git a/sci-libs/dcmtk/Manifest b/sci-libs/dcmtk/Manifest
index 1f9920e80..01fa7d1a7 100644
--- a/sci-libs/dcmtk/Manifest
+++ b/sci-libs/dcmtk/Manifest
@@ -1,3 +1,3 @@
-DIST dcmtk-3.5.4.tar.gz 3756374 RMD160 d1558c9c68e53e0ea3b080fd2fb50b9d8e30eeba SHA1 169056874947083e68eb941fcd53faaebc862ae5 SHA256 7b8575ba609516d76b681c0de8c1328cf23e57deb2c7085a6aa37d4292354d76
-DIST dcmtk-3.5.5_20101008.tar.gz 4662578 RMD160 ccda8393aa1d27745832ed74635ef545f1fedab2 SHA1 29539987c042fd9c75f7628f49a03c49aecf5876 SHA256 f8eb25c76e078a387f86cd09ee27687f9860a1e9072b321ac8e070ccb85b1d90
-DIST dcmtk_3.5.4-3.diff.gz 140253 RMD160 c06856a46513612c3a585bc3fea429d296ae6bb4 SHA1 75c14b8c6caa88155324b5bb8ed29363776ff7bf SHA256 8dd3ca447de4b0f1d553f672f36d5d88af86763604e2fc830667ce6fdd12677a
+DIST dcmtk-3.5.4.tar.gz 3756374 SHA256 7b8575ba609516d76b681c0de8c1328cf23e57deb2c7085a6aa37d4292354d76
+DIST dcmtk-3.5.5_20101008.tar.gz 4662578 SHA256 f8eb25c76e078a387f86cd09ee27687f9860a1e9072b321ac8e070ccb85b1d90
+DIST dcmtk_3.5.4-3.diff.gz 140253 SHA256 8dd3ca447de4b0f1d553f672f36d5d88af86763604e2fc830667ce6fdd12677a
diff --git a/sci-libs/driftwood/Manifest b/sci-libs/driftwood/Manifest
index b13ced107..fd66c9821 100644
--- a/sci-libs/driftwood/Manifest
+++ b/sci-libs/driftwood/Manifest
@@ -1 +1 @@
-DIST driftwood-0.87-src.tar.bz2 859378 RMD160 8a5bdf225568e09ca558fde59122abdce5d193d7 SHA1 c8298ad748ec179db621d952268229c6bff7fb30 SHA256 46a9da0c01e98bd29760ad4cd0a625842bb2c1ee609ad2d156915fe38e5cd62f
+DIST driftwood-0.87-src.tar.bz2 859378 SHA256 46a9da0c01e98bd29760ad4cd0a625842bb2c1ee609ad2d156915fe38e5cd62f
diff --git a/sci-libs/etsf_io/Manifest b/sci-libs/etsf_io/Manifest
index 45b7f5717..2af8e9f4f 100644
--- a/sci-libs/etsf_io/Manifest
+++ b/sci-libs/etsf_io/Manifest
@@ -1 +1 @@
-DIST etsf_io-1.0.3.tar 453734 RMD160 df90acd34b0de104a07844ae2c9694edf27519c6 SHA1 ab3c4cb22ea2fc2498b396f186f221edd2463fcc SHA256 a02ead44b9634bdb6e47e50d76f35d56c10df468743e6fe5259c0dc478f7b32e SHA512 2a60533a588587da5629687942044ed58b72a554c484d3c22263314cbeb21aa819d5097e6637b599de06474d4d92cc84ea94fa365123e677311be3bf7b8e7bf5 WHIRLPOOL 714cfa983b5f3411a04df88ad54513f71b482368cba93b790d5d93388a9aea346cd83de80311ed0fe5fdc51fac4af8be4428764119a0cf9f17df24e91f2ae74a
+DIST etsf_io-1.0.3.tar 453734 SHA256 a02ead44b9634bdb6e47e50d76f35d56c10df468743e6fe5259c0dc478f7b32e SHA512 2a60533a588587da5629687942044ed58b72a554c484d3c22263314cbeb21aa819d5097e6637b599de06474d4d92cc84ea94fa365123e677311be3bf7b8e7bf5 WHIRLPOOL 714cfa983b5f3411a04df88ad54513f71b482368cba93b790d5d93388a9aea346cd83de80311ed0fe5fdc51fac4af8be4428764119a0cf9f17df24e91f2ae74a
diff --git a/sci-libs/factory/Manifest b/sci-libs/factory/Manifest
index 843129ab2..cbd4195ea 100644
--- a/sci-libs/factory/Manifest
+++ b/sci-libs/factory/Manifest
@@ -1 +1 @@
-DIST factory-3-1-1.tar.gz 540431 RMD160 63b5d71c93b1c0f628d758959822f61b0a9c702c SHA1 2b0e087de5ff4d4b63c003e1b6f9926577f17264 SHA256 1f86833248ef2bb5fd7820201d08df864bda2d8be58bc69255ecdca6fdf12c1b
+DIST factory-3-1-1.tar.gz 540431 SHA256 1f86833248ef2bb5fd7820201d08df864bda2d8be58bc69255ecdca6fdf12c1b
diff --git a/sci-libs/fgsl/Manifest b/sci-libs/fgsl/Manifest
index c6fb6287e..d6b1ebea2 100644
--- a/sci-libs/fgsl/Manifest
+++ b/sci-libs/fgsl/Manifest
@@ -1,2 +1,2 @@
-DIST fgsl-0.9.3.tar.gz 293761 RMD160 159162527256408ecf210b382461794b71c4738c SHA1 96e0e0c6b538377bdbe043c8c064e5d60ba6e428 SHA256 ba6c7d95ea73ea81435b6960fa9dc1e6e11d2da7fa145117111352d873c71ce9
-DIST fgsl-0.9.4.tar.gz 999825 RMD160 7c12162b4fb64746d91715756c01e52dbb4e0e09 SHA1 82f3047a3b1b1970fae741946fd8479f15595362 SHA256 f589283f5b9df5df9ef39b108114df2ed740109fabb8956fe98eaaac20924ba7
+DIST fgsl-0.9.3.tar.gz 293761 SHA256 ba6c7d95ea73ea81435b6960fa9dc1e6e11d2da7fa145117111352d873c71ce9
+DIST fgsl-0.9.4.tar.gz 999825 SHA256 f589283f5b9df5df9ef39b108114df2ed740109fabb8956fe98eaaac20924ba7
diff --git a/sci-libs/fox/Manifest b/sci-libs/fox/Manifest
index 37048651b..4141f2f85 100644
--- a/sci-libs/fox/Manifest
+++ b/sci-libs/fox/Manifest
@@ -1,7 +1,7 @@
-DIST FoX-4.1.2-dom.tar.gz 225371 RMD160 40aa8db24d1494ca48179ea970203196ccd47ec0 SHA1 ef3335cc06d8680e920f86c43f6cd64746b92467 SHA256 12ff57bf6de41d23f06bf8f4f02969118d0fced2feab257dcc7204394cbfcb06 SHA512 de846d40ad442d2fff33dda17793f7334a87065d760920f17605926d4f91624cb134515b6c77392aa77a17532275e256301bdefa157eecbb0c13887bcaa7fe4c WHIRLPOOL 516270138eed8a165955ee8f47e0e5e5f34bcace7d604bc26e00d903494135597d0815bc7262ab500dcf33fe2a1cf6f02e05bf6864bc8a062d222e978b06fba7
+DIST FoX-4.1.2-dom.tar.gz 225371 SHA256 12ff57bf6de41d23f06bf8f4f02969118d0fced2feab257dcc7204394cbfcb06 SHA512 de846d40ad442d2fff33dda17793f7334a87065d760920f17605926d4f91624cb134515b6c77392aa77a17532275e256301bdefa157eecbb0c13887bcaa7fe4c WHIRLPOOL 516270138eed8a165955ee8f47e0e5e5f34bcace7d604bc26e00d903494135597d0815bc7262ab500dcf33fe2a1cf6f02e05bf6864bc8a062d222e978b06fba7
DIST FoX-4.1.2-full.tar.gz 1025375 SHA256 99f660a3d3cf9b9eb50e36d67dac3b80cfac92473462c3d6f3b340ba8d7c9b24 SHA512 bfd994768f4b8067cf2859949d51723c851521c444ba6a342901ae5e6ae86ed2832d59eac5f29048e1c2e5b27af6d1be4e7f026062832d650d894a865f1827c1 WHIRLPOOL 4f665380ae0e3c69efa5b9448d32d866efda6fa6e853bf1016088c45f704cafaa389cf0342041d0e07461ea32622fe967f3626668e153b316f2b162e08f0195d
-DIST FoX-4.1.2-sax.tar.gz 164451 RMD160 a9360ee08e47c7bbc0979175bc98508cb36e9325 SHA1 fabaf4ffc6c071b0049952c4e0aac5851e067b2f SHA256 7d247b11971b0025973d658c708b56acff8b51d1ff1a8503a9a2c64d4449fe26 SHA512 7391ed23c70b52cd4155da0fbef60fda8a628e682b93b9340478d0a7bef0e9bd0016610fb45141b54063c001a5031baeb8ec66239e5b763cdc226fb5680f3de2 WHIRLPOOL 4cbd518c128c512fdb24f9024420240fbc133c50a82c1cb4cc570186403ec4343652662d3595e57602dfcc1bd477b82b851135524669dfcf7b18fe2df5ce2abf
-DIST FoX-4.1.2-wcml.tar.gz 163504 RMD160 c186a76adf725d6c2c1f6ccf317c0c8023f5ab2e SHA1 953dec0852695652547b6ec7324e836239b93d73 SHA256 cb98d41ee71cff7581321fb8b35324dd066bfdbf853a1dc83803366766f68d35 SHA512 32a1bea6e52926958ec7ca24256dd824bf97f84ae1ce691d01d607b4f7fc4e1c811ead36a9f1260aa4696aeba964d9b3db1673a011b5a8f1d1b9c96590be8ffb WHIRLPOOL bda5dc3b187d4f52a86ef3d2cb4e2f96aafababaa94ce862747e5fd42d31e67e7e67ba941fdbdaeb02ba2628e156070986451f423f9988817643ef5af604773b
-DIST FoX-4.1.2-wkml.tar.gz 207539 RMD160 1600eb988dfba33968ecdbff9b36e0735199d5a4 SHA1 51396e04528a2d6829643f1d0fb6e3f5b07cd8fe SHA256 920a9996c79886ea8bc872ed445992ee075e64eee7db97989af56e66958046c7 SHA512 1f3e0f2750e8a500e4c8c1d6f03f8a52615cea1448c69d35750ea8bd06bdcb02ac136a34ba1af07a363dfe018cf6bf28e54f7ce19e6d06cc554391219525f1f3 WHIRLPOOL 97a808e4efd44c23dd8063a36ce8c04c7047271a6d49f17c0e9a50da2aa20e7adcb5e00d6d58578a056c7fca51c718022ebefac60a03674c68dcbfb3491753dc
-DIST FoX-4.1.2-wxml.tar.gz 149964 RMD160 5844508629f122798976cb80f5758c0ec5c99d9b SHA1 4b728f2879e0cacb72b4a6c7c6551bf3be247c43 SHA256 37d0d509e092725dddc0488ff4ba77d24b56ea11ed220dccc6d1a3cc8f008194 SHA512 3b69e42dc2e627477b96750d267d24365da69515036c508979b3cde74de63e3567ee1a6335a4113d5c69abb0eb8c248da290270faf01ad42f849016c3c31438d WHIRLPOOL 29f4316e58d0bca02d318371e08af2aa28d6dd7c39e599dac17a9a9116ff4326e035671e6a554bc931ca1140aacd408a71bd1e9c98a7b18c67f2f364cc215cb4
-DIST FoX-4.1.2.tar.gz 296666 RMD160 dc67eca01fe26583dd369c2027e4dabc8352b326 SHA1 96e5cf1663fbbf3209b22930a110b33c516fd91b SHA256 3b749138229e7808d0009a97e2ac47815ad5278df6879a9cc64351a7921ba06f SHA512 a0ce79599118a04c19e87fc7ed0097520b4acf9e60a63038e8f9da9cb5ba94ba2bddb5c51c967c02037ba9e7ef41924ac173e73d5598a6654717e31c642c9d61 WHIRLPOOL 0abe0da4f0925e74d528ff0925099b6563cdeafe84a8444698a7c041901776cb35c2b2ba1d274455bec0cf3ed6da4e04467a6a009fe8bded7791f9c2085ac953
+DIST FoX-4.1.2-sax.tar.gz 164451 SHA256 7d247b11971b0025973d658c708b56acff8b51d1ff1a8503a9a2c64d4449fe26 SHA512 7391ed23c70b52cd4155da0fbef60fda8a628e682b93b9340478d0a7bef0e9bd0016610fb45141b54063c001a5031baeb8ec66239e5b763cdc226fb5680f3de2 WHIRLPOOL 4cbd518c128c512fdb24f9024420240fbc133c50a82c1cb4cc570186403ec4343652662d3595e57602dfcc1bd477b82b851135524669dfcf7b18fe2df5ce2abf
+DIST FoX-4.1.2-wcml.tar.gz 163504 SHA256 cb98d41ee71cff7581321fb8b35324dd066bfdbf853a1dc83803366766f68d35 SHA512 32a1bea6e52926958ec7ca24256dd824bf97f84ae1ce691d01d607b4f7fc4e1c811ead36a9f1260aa4696aeba964d9b3db1673a011b5a8f1d1b9c96590be8ffb WHIRLPOOL bda5dc3b187d4f52a86ef3d2cb4e2f96aafababaa94ce862747e5fd42d31e67e7e67ba941fdbdaeb02ba2628e156070986451f423f9988817643ef5af604773b
+DIST FoX-4.1.2-wkml.tar.gz 207539 SHA256 920a9996c79886ea8bc872ed445992ee075e64eee7db97989af56e66958046c7 SHA512 1f3e0f2750e8a500e4c8c1d6f03f8a52615cea1448c69d35750ea8bd06bdcb02ac136a34ba1af07a363dfe018cf6bf28e54f7ce19e6d06cc554391219525f1f3 WHIRLPOOL 97a808e4efd44c23dd8063a36ce8c04c7047271a6d49f17c0e9a50da2aa20e7adcb5e00d6d58578a056c7fca51c718022ebefac60a03674c68dcbfb3491753dc
+DIST FoX-4.1.2-wxml.tar.gz 149964 SHA256 37d0d509e092725dddc0488ff4ba77d24b56ea11ed220dccc6d1a3cc8f008194 SHA512 3b69e42dc2e627477b96750d267d24365da69515036c508979b3cde74de63e3567ee1a6335a4113d5c69abb0eb8c248da290270faf01ad42f849016c3c31438d WHIRLPOOL 29f4316e58d0bca02d318371e08af2aa28d6dd7c39e599dac17a9a9116ff4326e035671e6a554bc931ca1140aacd408a71bd1e9c98a7b18c67f2f364cc215cb4
+DIST FoX-4.1.2.tar.gz 296666 SHA256 3b749138229e7808d0009a97e2ac47815ad5278df6879a9cc64351a7921ba06f SHA512 a0ce79599118a04c19e87fc7ed0097520b4acf9e60a63038e8f9da9cb5ba94ba2bddb5c51c967c02037ba9e7ef41924ac173e73d5598a6654717e31c642c9d61 WHIRLPOOL 0abe0da4f0925e74d528ff0925099b6563cdeafe84a8444698a7c041901776cb35c2b2ba1d274455bec0cf3ed6da4e04467a6a009fe8bded7791f9c2085ac953
diff --git a/sci-libs/fplll/Manifest b/sci-libs/fplll/Manifest
index 0f32e52be..4ffd82a09 100644
--- a/sci-libs/fplll/Manifest
+++ b/sci-libs/fplll/Manifest
@@ -1 +1 @@
-DIST fplll-2.1.6.tgz 2140160 RMD160 358d9ef9ba86594deb8c953defd55aacc51fadd7 SHA1 8f4e647596e5a68bb633b2b4f0546d201dd6a3a3 SHA256 cef1e45766e363135b1e36c40504d40d0c6182172b2cd7e48e7103f8aa6a7ab3
+DIST fplll-2.1.6.tgz 2140160 SHA256 cef1e45766e363135b1e36c40504d40d0c6182172b2cd7e48e7103f8aa6a7ab3
diff --git a/sci-libs/framewave/Manifest b/sci-libs/framewave/Manifest
index bb1becae1..11c187307 100644
--- a/sci-libs/framewave/Manifest
+++ b/sci-libs/framewave/Manifest
@@ -1 +1 @@
-DIST FRAMEWAVE_1.3.1_SRC.tar.gz 5405064 RMD160 a01af24a31b44e51f69e9dd3bc20b3e272cb4c4b SHA1 0e292195f9f66992365e0f6e8adf4c41403dd983 SHA256 92f2f1df3be12526089db7fe35ca8ed97a1cb4feb198162f30620b72e5f44425
+DIST FRAMEWAVE_1.3.1_SRC.tar.gz 5405064 SHA256 92f2f1df3be12526089db7fe35ca8ed97a1cb4feb198162f30620b72e5f44425
diff --git a/sci-libs/geom/Manifest b/sci-libs/geom/Manifest
index 24a954017..ed41324cf 100644
--- a/sci-libs/geom/Manifest
+++ b/sci-libs/geom/Manifest
@@ -1 +1 @@
-DIST geom-5.1.2.7.tar.gz 612914 RMD160 e6d104800bae2e1191897f0aa138619157fa617c SHA1 195e62e38c9c25e75546afb803abf2a2d403dbdd SHA256 c0685d82535db3899d9321d72237b5d1be2dbafd1c85f990f767d5cd88571055
+DIST geom-5.1.2.7.tar.gz 612914 SHA256 c0685d82535db3899d9321d72237b5d1be2dbafd1c85f990f767d5cd88571055
diff --git a/sci-libs/givaro/Manifest b/sci-libs/givaro/Manifest
index 2e09564f3..1ea550033 100644
--- a/sci-libs/givaro/Manifest
+++ b/sci-libs/givaro/Manifest
@@ -1,2 +1,2 @@
-DIST givaro-3.2.13.tar.gz 601026 RMD160 46595f1de7f6b7e79c35136b73d1a330fb7e483e SHA1 943927b16c6f5529572ecb439918dec3fa637f3a SHA256 cef5972a79038c7fdbbcc80c90917ed0b339614723e9cd12436b55358ef34eb0
-DIST givaro-3.3.tar.gz 643288 RMD160 0bd1af1455c79d967cd08ca632e9f86598bf7b14 SHA1 6eacec1706e6b58905197b194085a37e123b7489 SHA256 90677ee9af4a33f827dfce48359c2c419302dfb46227fb8cc16de23f18ac757e
+DIST givaro-3.2.13.tar.gz 601026 SHA256 cef5972a79038c7fdbbcc80c90917ed0b339614723e9cd12436b55358ef34eb0
+DIST givaro-3.3.tar.gz 643288 SHA256 90677ee9af4a33f827dfce48359c2c419302dfb46227fb8cc16de23f18ac757e
diff --git a/sci-libs/libcgnsoo/Manifest b/sci-libs/libcgnsoo/Manifest
index 010f2ada8..f1c6abdf1 100644
--- a/sci-libs/libcgnsoo/Manifest
+++ b/sci-libs/libcgnsoo/Manifest
@@ -1 +1 @@
-DIST libcgnsoo-3.0_1728.orig.tar.gz 363425 RMD160 3a516c3a0a0217c10599a890308c681ad944d5d2 SHA1 865e42ec55c47091cb1bf23c35d1520bc418324d SHA256 88cb09e2280a19b39ff44a4a5ffb0f1082158e46b4247e12c245a7ca570b37d3
+DIST libcgnsoo-3.0_1728.orig.tar.gz 363425 SHA256 88cb09e2280a19b39ff44a4a5ffb0f1082158e46b4247e12c245a7ca570b37d3
diff --git a/sci-libs/libfac/Manifest b/sci-libs/libfac/Manifest
index 8e9e3f066..658968a6d 100644
--- a/sci-libs/libfac/Manifest
+++ b/sci-libs/libfac/Manifest
@@ -1,2 +1,2 @@
-DIST libfac-3-1-0.tar.gz 91544 RMD160 2500d402328ad532756c677015c1d01f8594e394 SHA1 d005ddd58a180b8a91fe5728b96bde515c5d9cc5 SHA256 fc3dda08f7ec039635f8d7f1629546f4ac7620a69cf9332ca39e29dd822aee7d
-DIST libfac-3-1-1.tar.gz 90104 RMD160 8ca086ad2dc1dfbf3d8824e244f0b1af087eef62 SHA1 3753363a6f56cfeb0d0be3bdf471d6bd55c14ede SHA256 4c463af2d22375aa62be4fb1f9a32cada6723ca5e3ddbd8a4f5cab72b675e33a
+DIST libfac-3-1-0.tar.gz 91544 SHA256 fc3dda08f7ec039635f8d7f1629546f4ac7620a69cf9332ca39e29dd822aee7d
+DIST libfac-3-1-1.tar.gz 90104 SHA256 4c463af2d22375aa62be4fb1f9a32cada6723ca5e3ddbd8a4f5cab72b675e33a
diff --git a/sci-libs/libxc/Manifest b/sci-libs/libxc/Manifest
index 6f2f15d9e..fa863cf20 100644
--- a/sci-libs/libxc/Manifest
+++ b/sci-libs/libxc/Manifest
@@ -1,2 +1,2 @@
DIST libxc-1.1.0.tar.gz 543168 SHA256 b75fb2a73a9e2d75e250cc77b71d5485c8e9b11c3b25c91899c366e217283c57 SHA512 a5ed3a4a7a7abaa11321fe877d01ff00132eab976205213e578cd57fbd2073eea00ce3a3afc188e30ebbd31deb32468c4472313df9992e8d9e3148e6f619936b WHIRLPOOL 8ff70acb2ee65b3373942b71e350fe146f1c205aa4c09dbb22adc04227ba6888482ce412b3e843a9402efd51f9cf6f478f9c65b97305b2035185e59b35484d9f
-DIST libxc-1.2.0.tar.gz 895527 RMD160 66d0bd8b2a7b1d5cd6ea7b5ee46741ae5f05cc50 SHA1 ff34f2de4af0ff048eb871b8a48f9ccd6bc4e2cc SHA256 ee441c3cde2e2bd87828186aa17f6e4438d17b38634c5d29bb12d3b7554461fb SHA512 3ac0fd07e40db4feb0f0a4ebe1358fdd4de0fff21f6dd369895c658a14cd3bafedbbc374b89f68320401dfcfe16a6230e05403fdaccfcbebb98349ca06593125 WHIRLPOOL 66439bf65a656567c0e52a4ee20b206658a9185bdbd3e045daca00bf01ba0199ccbedea3e5034cf90fbc36dbc04d9666cde8bde46e2577ffd160800f1718bd2a
+DIST libxc-1.2.0.tar.gz 895527 SHA256 ee441c3cde2e2bd87828186aa17f6e4438d17b38634c5d29bb12d3b7554461fb SHA512 3ac0fd07e40db4feb0f0a4ebe1358fdd4de0fff21f6dd369895c658a14cd3bafedbbc374b89f68320401dfcfe16a6230e05403fdaccfcbebb98349ca06593125 WHIRLPOOL 66439bf65a656567c0e52a4ee20b206658a9185bdbd3e045daca00bf01ba0199ccbedea3e5034cf90fbc36dbc04d9666cde8bde46e2577ffd160800f1718bd2a
diff --git a/sci-libs/lwpr/Manifest b/sci-libs/lwpr/Manifest
index cf1c8b0b5..0be84d001 100644
--- a/sci-libs/lwpr/Manifest
+++ b/sci-libs/lwpr/Manifest
@@ -1 +1 @@
-DIST lwpr-1.2.2.tar.gz 723920 RMD160 055f6c437e7e310b6f2ae77946443ee280c1334d SHA1 9e60bae960831f669701e106c276a3a4bea81b27 SHA256 a55d0ca8b66d4b62d07767ade714f545cf24d933b37d58613d8a79882afcf918
+DIST lwpr-1.2.2.tar.gz 723920 SHA256 a55d0ca8b66d4b62d07767ade714f545cf24d933b37d58613d8a79882afcf918
diff --git a/sci-libs/m4ri/Manifest b/sci-libs/m4ri/Manifest
index b41abb945..36f97fb95 100644
--- a/sci-libs/m4ri/Manifest
+++ b/sci-libs/m4ri/Manifest
@@ -1,2 +1,2 @@
-DIST m4ri-20090512.tar.gz 983208 RMD160 9423cace7197e2444a760448c7d7a08ea77c068a SHA1 f573bc1522100a400c16db8693baa5841515f574 SHA256 504d9630cc5af564af44e77daf2720f4bcd92e3d825b69f2a92a2ba547beab62
-DIST m4ri-20100221.tar.bz2 1236812 RMD160 2a1436aa1fbfaec3e7ffeaff1fbbf799116c55fc SHA1 35b1829595e01c64cccf0d1101ad68a89697a544 SHA256 8463aaae43ec5caef6087a819d78cc7e0dc6a24ac049849142c0290b238ab68d
+DIST m4ri-20090512.tar.gz 983208 SHA256 504d9630cc5af564af44e77daf2720f4bcd92e3d825b69f2a92a2ba547beab62
+DIST m4ri-20100221.tar.bz2 1236812 SHA256 8463aaae43ec5caef6087a819d78cc7e0dc6a24ac049849142c0290b238ab68d
diff --git a/sci-libs/matio/Manifest b/sci-libs/matio/Manifest
index b7e56703e..7e3a6e6dd 100644
--- a/sci-libs/matio/Manifest
+++ b/sci-libs/matio/Manifest
@@ -1 +1 @@
-DIST matio-1.3.4.tar.gz 450343 RMD160 3a0f2fe1260e48af0fb9e501d0af1383cefe5dd3 SHA1 721b9b57f2437850dd114acca1f422622e2c47e2 SHA256 7261880b18a661e5d206b4e479d4334b47549f093130df42f7204fd05dfe0bc5
+DIST matio-1.3.4.tar.gz 450343 SHA256 7261880b18a661e5d206b4e479d4334b47549f093130df42f7204fd05dfe0bc5
diff --git a/sci-libs/mesquite/Manifest b/sci-libs/mesquite/Manifest
index a576f326e..eabd79456 100644
--- a/sci-libs/mesquite/Manifest
+++ b/sci-libs/mesquite/Manifest
@@ -1 +1 @@
-DIST mesquite-2.1.2.tar.gz 7209426 RMD160 fde11f806926df6ef63ba9b4fc5e6fe74a25d181 SHA1 0aaf8c13b34c24bcb903811d87bba80fe6845bc8 SHA256 a1410104737c27e6f59b131b5c93a462016c5f2e51cf4381dd940638fe1a968f
+DIST mesquite-2.1.2.tar.gz 7209426 SHA256 a1410104737c27e6f59b131b5c93a462016c5f2e51cf4381dd940638fe1a968f
diff --git a/sci-libs/ni-visa/Manifest b/sci-libs/ni-visa/Manifest
index 21624ce03..1fde772c2 100644
--- a/sci-libs/ni-visa/Manifest
+++ b/sci-libs/ni-visa/Manifest
@@ -1 +1 @@
-DIST NI-VISA-0.0.1.iso 1 RMD160 c0da025038ed83c687ddc430da9846ecb97f3998 SHA1 adc83b19e793491b1c6ea0fd8b46cd9f32e592fc SHA256 01ba4719c80b6fe911b091a7c05124b64eeece964e09c058ef8f9805daca546b
+DIST NI-VISA-0.0.1.iso 1 SHA256 01ba4719c80b6fe911b091a7c05124b64eeece964e09c058ef8f9805daca546b
diff --git a/sci-libs/oasa/Manifest b/sci-libs/oasa/Manifest
index 167d30ffc..c9017f7ac 100644
--- a/sci-libs/oasa/Manifest
+++ b/sci-libs/oasa/Manifest
@@ -1 +1 @@
-DIST oasa-0.13.1.tar.gz 165293 RMD160 2bc46f535cead720bd71632290f6bb04f86ee8d0 SHA1 ac4e19d47bf81d8431c6d3c0bcc5b72e8025961b SHA256 196689513514fb45a062882454c85722ff2edab54901458c2ddfc962580c3431
+DIST oasa-0.13.1.tar.gz 165293 SHA256 196689513514fb45a062882454c85722ff2edab54901458c2ddfc962580c3431
diff --git a/sci-libs/omalloc/Manifest b/sci-libs/omalloc/Manifest
index 313456d75..be98b1066 100644
--- a/sci-libs/omalloc/Manifest
+++ b/sci-libs/omalloc/Manifest
@@ -1 +1 @@
-DIST Singular-3-1-1-2.tar.gz 19397418 RMD160 205671f1ea2e2f22c025defc3d85c762362c7e3f SHA1 217af7a4e9b36b769a145bf81fb27c49d64333f6 SHA256 4e5929b324f952c69de1dedddbeca1c51a3733a0f63e026d3e7b61a7e469d5a7
+DIST Singular-3-1-1-2.tar.gz 19397418 SHA256 4e5929b324f952c69de1dedddbeca1c51a3733a0f63e026d3e7b61a7e469d5a7
diff --git a/sci-libs/symmetrica/Manifest b/sci-libs/symmetrica/Manifest
index 13f10d8c6..8237f5653 100644
--- a/sci-libs/symmetrica/Manifest
+++ b/sci-libs/symmetrica/Manifest
@@ -1 +1 @@
-DIST SYM2_0.tar.gz 720154 RMD160 1da19c9a72e2c54ced7e35372cdbc49a01e2cf82 SHA1 fd6f975d971c3e7c72b6cc5fcb3e5b37f5a73725 SHA256 bf52788dedc14c482e89f5e7efe8c60864a633314ddd446dd4602d5fdaca0ee2
+DIST SYM2_0.tar.gz 720154 SHA256 bf52788dedc14c482e89f5e7efe8c60864a633314ddd446dd4602d5fdaca0ee2
diff --git a/sci-libs/trilinos/Manifest b/sci-libs/trilinos/Manifest
index a800ee5f4..b67d1f379 100644
--- a/sci-libs/trilinos/Manifest
+++ b/sci-libs/trilinos/Manifest
@@ -1 +1,2 @@
DIST trilinos-11.0.3-Source.tar.gz 107076534 SHA256 4e9d68d23eac1076200a3224fab14cd3a63a77574f1456d1bff931b2887b5c63 SHA512 9c449c6f9b2bc6346867bc68c29f83edc81790889d483129a98d149e1ff79d32b13310e8fcb3b4412b2f722b5d7efedd2a65f2e882b38629d4a1d50ecfc9783f WHIRLPOOL 7af72bd92cb4aa72ec8d98065570c9af2cc04187b7b2cce5d701e25d2c25efdc8826a4359b035008b8cf086026b88126bcfa6e807cac4f18d5fb745a48568f10
+DIST trilinos-11.2.3-Source.tar.bz2 101522486 SHA256 e8c7a899b9cbb1a8b168b3da5621eb34c9e48c2d48dfbf651366a50a465772c2 SHA512 9a64fd092012a67e0c317fb242a5e6378e543f8aa11d0f9e0bb45569c5f7e146f97e85a462305fe3c92436cc2540b95597c2ffc9bbcfc4b7ee08d9a09dbcdb80 WHIRLPOOL ac27521c7c5ca2e4337ff1aa9f18e68bcde8c5130821dfc8cda5af10c91e2e79e20017c2b76773ca412234b43885df30d781a0cb67ae2c15c47c091f548bdb8e
diff --git a/sci-libs/trilinos/metadata.xml b/sci-libs/trilinos/metadata.xml
index 5c0fd5550..fbde4bfd0 100644
--- a/sci-libs/trilinos/metadata.xml
+++ b/sci-libs/trilinos/metadata.xml
@@ -1,40 +1,24 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <herd>sci</herd>
- <maintainer>
- <email>andyspiros@gmail.com</email>
- </maintainer>
- <longdescription lang="en">
- The Trilinos Project is an effort to develop algorithms and enabling
- technologies within an object-oriented software framework for the solution
- of large-scale, complex multi-physics engineering and scientific problems.
- </longdescription>
- <use>
- <flag name="arprec">Undocumented USE</flag>
- </use>
- <use>
- <flag name="boost">Undocumented USE</flag>
- </use>
- <use>
- <flag name="cuda">Undocumented USE</flag>
- </use>
- <use>
- <flag name="hwloc">Undocumented USE</flag>
- </use>
- <use>
- <flag name="qd">Undocumented USE</flag>
- </use>
- <use>
- <flag name="scotch">Undocumented USE</flag>
- </use>
- <use>
- <flag name="taucs">Undocumented USE</flag>
- </use>
- <use>
- <flag name="tbb">Undocumented USE</flag>
- </use>
- <use>
- <flag name="umfpack">Undocumented USE</flag>
- </use>
+<herd>sci</herd>
+<maintainer>
+ <email>andyspiros@gmail.com</email>
+</maintainer>
+<longdescription lang="en">
+ The Trilinos Project is an effort to develop algorithms and enabling
+ technologies within an object-oriented software framework for the solution
+ of large-scale, complex multi-physics engineering and scientific problems.
+</longdescription>
+<use>
+ <flag name="arprec">Undocumented USE</flag>
+ <flag name="boost">Undocumented USE</flag>
+ <flag name="cuda">Undocumented USE</flag>
+ <flag name="hwloc">Undocumented USE</flag>
+ <flag name="qd">Undocumented USE</flag>
+ <flag name="scotch">Undocumented USE</flag>
+ <flag name="taucs">Undocumented USE</flag>
+ <flag name="tbb">Undocumented USE</flag>
+ <flag name="umfpack">Undocumented USE</flag>
+</use>
</pkgmetadata>
diff --git a/sci-mathematics/Oid/Manifest b/sci-mathematics/Oid/Manifest
index 77b82de63..2e67568fd 100644
--- a/sci-mathematics/Oid/Manifest
+++ b/sci-mathematics/Oid/Manifest
@@ -1,2 +1,2 @@
-DIST Oid4-0.tar.gz 244760 RMD160 f5beb62e0373fa14605b8f8277d803e3056bf37c SHA1 9d4bb24cfe09134e794de412cf6532d8b1222ab6 SHA256 225c2089bfb99e386af8344c5a3fd606c19fce9a8132df5a65c6b3de956e00bf
-DIST OidUserManual4-0.pdf 191264 RMD160 eccb7297dcc587f715d75601eacd4ed012c00e03 SHA1 e7bbbbc859549a745c382bd653c2a29d04aeb17a SHA256 87f96d61c42b0f430da1295b159ac0079aa05fea45fca44bdf9a3efb504239b0
+DIST Oid4-0.tar.gz 244760 SHA256 225c2089bfb99e386af8344c5a3fd606c19fce9a8132df5a65c6b3de956e00bf
+DIST OidUserManual4-0.pdf 191264 SHA256 87f96d61c42b0f430da1295b159ac0079aa05fea45fca44bdf9a3efb504239b0
diff --git a/sci-mathematics/acl2/Manifest b/sci-mathematics/acl2/Manifest
index c982fbf64..3ef291c3d 100644
--- a/sci-mathematics/acl2/Manifest
+++ b/sci-mathematics/acl2/Manifest
@@ -1 +1 @@
-DIST acl2.tar.gz 11699557 RMD160 622dbef91b3af8d75a99cc482ca240a20cc8af0a SHA1 75c24b3fc6b1ca0e7a4163fd47088eca3b0c1104 SHA256 0f727b44257640346dc6eecc046f339b171676e79c31883535281e61bbfca077
+DIST acl2.tar.gz 11699557 SHA256 0f727b44257640346dc6eecc046f339b171676e79c31883535281e61bbfca077
diff --git a/sci-mathematics/apron/Manifest b/sci-mathematics/apron/Manifest
index 491166b28..e9d2c4184 100644
--- a/sci-mathematics/apron/Manifest
+++ b/sci-mathematics/apron/Manifest
@@ -1,4 +1 @@
-DIST apron-0.9.10.tgz 1694989 RMD160 44dc11b4dea380bd0422fdbf541a9083737b6fc0 SHA1 0e0d857bd646de6a8b16e60d80b06f48a62c51df SHA256 b108de2f4a8c4ecac1ff76a6d282946fd3bf1466a126cf5344723955f305ec8e
-EBUILD apron-0.9.10.ebuild 2433 RMD160 17c0844fb21a0abac0e321a53b0d3d5ac89b22af SHA1 bcb5c53b357ef1f5202646fb38e1a414eb87fd7d SHA256 5a2f2cec08bb549e1163029181587a466e5e174f8004992322143737a5ed8323
-MISC ChangeLog 715 RMD160 00614bd947614ad4566a307c9ff67c8e61feb2c5 SHA1 4d5924907ecce3b95f7eda268114dd4eb25eea8d SHA256 88c698ed4a8d23beffce00893633a60520ad266fca59f2596c1c02f3ce243aad
-MISC metadata.xml 864 RMD160 149c13d27bfcd69c0484e11229fee7f08ce99f70 SHA1 46542ae1284f7e094b4ce8bcba00a8be50839393 SHA256 b094cb1d058da18457e96645d3d8de045123d742add9bac42dae6b8e661c9110
+DIST apron-0.9.10.tgz 1694989 SHA256 b108de2f4a8c4ecac1ff76a6d282946fd3bf1466a126cf5344723955f305ec8e
diff --git a/sci-mathematics/aribas/Manifest b/sci-mathematics/aribas/Manifest
index 7fb7cda52..e42046b44 100644
--- a/sci-mathematics/aribas/Manifest
+++ b/sci-mathematics/aribas/Manifest
@@ -1 +1 @@
-DIST aribas-1.63.tar.gz 291939 RMD160 f377eac5fa6da2aa2411f7e75eca426e539ad2aa SHA1 280d71a7ecaa8f1ce6c62efa61118e2f48b63353 SHA256 60d5367057780ded5bab012a5d55f192c3f98f315e1c8475092791ce216c9543
+DIST aribas-1.63.tar.gz 291939 SHA256 60d5367057780ded5bab012a5d55f192c3f98f315e1c8475092791ce216c9543
diff --git a/sci-mathematics/axiom/Manifest b/sci-mathematics/axiom/Manifest
index 9a52ddcd9..59d55b018 100644
--- a/sci-mathematics/axiom/Manifest
+++ b/sci-mathematics/axiom/Manifest
@@ -1 +1 @@
-DIST axiom-sept2010-src.tgz 119714986 RMD160 acb5fee41b5216e59119ff3708ac8869835b881e SHA1 e9c0b7b26a98c884b830f1356cfb748fa4b45fc1 SHA256 b750350f065ad5db3edda228908728b83bf5fec100052a83eeebc628bc3ef4bf
+DIST axiom-sept2010-src.tgz 119714986 SHA256 b750350f065ad5db3edda228908728b83bf5fec100052a83eeebc628bc3ef4bf
diff --git a/sci-mathematics/burrtools/Manifest b/sci-mathematics/burrtools/Manifest
index eae404654..69731dcbc 100644
--- a/sci-mathematics/burrtools/Manifest
+++ b/sci-mathematics/burrtools/Manifest
@@ -1,2 +1,2 @@
-DIST burrtools-0.5.2-A4.pdf 1268505 RMD160 93eb65eaf66d201145ccbac0a60219fbc8c4ee4e SHA1 24e1d1747d3c0c4a570bbb5a4cd6cafa19204142 SHA256 7ef48e7fcbd8e426e8fab1205def32e108c822b31949440d9bf04e3587e0164e
-DIST burrtools-0.5.2.tar.gz 1920561 RMD160 789872a5c298693fc08fee499773cae030f4cb32 SHA1 ccac1c7d6015151f7b234ebcf9df1a3a116368ea SHA256 400d549ebcb9d190c19d72582268a45cb7c54d2247f3531d212ddb1d7a83c8c7
+DIST burrtools-0.5.2-A4.pdf 1268505 SHA256 7ef48e7fcbd8e426e8fab1205def32e108c822b31949440d9bf04e3587e0164e
+DIST burrtools-0.5.2.tar.gz 1920561 SHA256 400d549ebcb9d190c19d72582268a45cb7c54d2247f3531d212ddb1d7a83c8c7
diff --git a/sci-mathematics/dolfin/Manifest b/sci-mathematics/dolfin/Manifest
index 6b91648e6..0b723e0ee 100644
--- a/sci-mathematics/dolfin/Manifest
+++ b/sci-mathematics/dolfin/Manifest
@@ -1 +1 @@
-DIST dolfin-0.9.9.tar.gz 10229504 RMD160 063e07c7fdf61ed123014f4d89988a19adf0aba2 SHA1 8f85e70b25f4f5986ff3757f15b60f842451a602 SHA256 41c1760dbe40fc2b6cd623a181c4e168881598defe0874ac7686a413ea7b73f4
+DIST dolfin-0.9.9.tar.gz 10229504 SHA256 41c1760dbe40fc2b6cd623a181c4e168881598defe0874ac7686a413ea7b73f4
diff --git a/sci-mathematics/frama-c/Manifest b/sci-mathematics/frama-c/Manifest
index efb22a517..573040c1c 100644
--- a/sci-mathematics/frama-c/Manifest
+++ b/sci-mathematics/frama-c/Manifest
@@ -1,4 +1 @@
DIST frama-c-Oxygen-20120901.tar.gz 10815011 SHA256 f749870a2451f97d24da886c0cc7708e3ec57ad3f169f6b79f9b52be1f47c216 SHA512 fcf96dd2c0e50c4f125050b677f55d960d3a78d2d827cbb6f9ddd98892162cb1181053202ce46f74911b29ad895489d51939a2bb52dafed440ee2abcbde41224 WHIRLPOOL 7f226eac21aa3bdddd42a85819559745444855b116a89a849d32a57f652d3e3dd001e60d1b3ac6388ebed29a7b0c43a1190b4dafec959273d560b6d58e2f2694
-EBUILD frama-c-20120901.ebuild 1356 SHA256 48db10b35dd3befcc11903ee43b28ce3607d805bcb75a402371efff671962ecd SHA512 fce377e87972e16324d240a5da1c57baf6faf963aa645e1b82bd085090c94163113549f4afc603c09a5386f26ae193991f23bf8038a78de4fc98d97436a9eb13 WHIRLPOOL f1e0de4c3874b798c595ccfeef68464d7b01e1985f27571955de667ccb3b8bebcf6829a67485f6b272f67b13a0383609daff7a1f660f953701288f2896c79899
-MISC ChangeLog 1012 SHA256 c2276101e2dfa3ddcfd8218355590ab8f96d5ac49d2ddca67a1452a9ebf41bfa SHA512 7e04a433f136c24e1f1e2d319e254332dd654cd7a4dfe60cf16ed676827ddebd097f4cd81b6218e1fa7ecfdba86917dccfde15fba7e6b37f7dcdd1554179a282 WHIRLPOOL 42c8cbfffd842ae89ddf3b296c6fb9861f169f6ac1fa936636f1b9fee07e9d1960b75de57ca1bab3d69f7396ccd6241525d698d6b0a98d10af31509b5cf41ce3
-MISC metadata.xml 821 SHA256 03eed3b99543c4497d69633fbb76362faacc117ffa9b27a15709d21b6c47a7cf SHA512 5a9980d08aea9605dab7f45a6ef9ffb40f95c68a98ef65f17d88edb7a660da38f5d28a6cb7eadad00d5e9597f371539099233e36d794f759b094b5a5f0c76993 WHIRLPOOL b10f8efeb50c036440d79bb832fbe9d3dd7d4f38cddcfc8fb6d2288ac8471abc206ee709cef86ba3ab4250ce90ca9c5f1b689f882b3c8c241389ded46a7f92ef
diff --git a/sci-mathematics/gap-guava/Manifest b/sci-mathematics/gap-guava/Manifest
index 0681f1141..b07a99b44 100644
--- a/sci-mathematics/gap-guava/Manifest
+++ b/sci-mathematics/gap-guava/Manifest
@@ -1 +1 @@
-DIST guava3.10.tar.bz2 2384499 RMD160 31d1367c1e7cf1f28429d596a42a2cfd1dd23579 SHA1 bbf72b0b40a30f56ecedce3caa52ad7ee06a0103 SHA256 1ce828d6697acaf0b7dde56e20037b992ae750c08cb3b9f3b8c0c26c9e914f51
+DIST guava3.10.tar.bz2 2384499 SHA256 1ce828d6697acaf0b7dde56e20037b992ae750c08cb3b9f3b8c0c26c9e914f51
diff --git a/sci-mathematics/gap/Manifest b/sci-mathematics/gap/Manifest
index 7350250c2..54b5bba2a 100644
--- a/sci-mathematics/gap/Manifest
+++ b/sci-mathematics/gap/Manifest
@@ -1,2 +1,2 @@
-DIST gap4r4p12.tar.bz2 47715810 RMD160 124f78de675b952032a50c5bc19a49b870410964 SHA1 b6b6b809c0a2ec5ed202fa672517a2199b0bf91e SHA256 5ff56c5eb89b1fd0da9f216dbe1dce8fe44674858b6ad06cb277d36b7960be4d
-DIST xtom1r1p4.tar.bz2 11480845 RMD160 85db22d9af4e4029e82b5ad213cc9cf4de194041 SHA1 544d738afc3086be93ef2729e85a40f938c8be96 SHA256 5591dfa222d2fb6c4596c3e5c5347db339e08f209798e4a332a0d902035d4f66
+DIST gap4r4p12.tar.bz2 47715810 SHA256 5ff56c5eb89b1fd0da9f216dbe1dce8fe44674858b6ad06cb277d36b7960be4d
+DIST xtom1r1p4.tar.bz2 11480845 SHA256 5591dfa222d2fb6c4596c3e5c5347db339e08f209798e4a332a0d902035d4f66
diff --git a/sci-mathematics/gappa/Manifest b/sci-mathematics/gappa/Manifest
index e38bde33b..cc6b959e4 100644
--- a/sci-mathematics/gappa/Manifest
+++ b/sci-mathematics/gappa/Manifest
@@ -1,4 +1 @@
DIST gappa-0.16.3.tar.gz 401491 SHA256 ccd74dd6bfaa78f7250fe88c0cad51caf317b171ace2f1dfe2a775b3cf5595cc SHA512 9af53cb877ce505a89d48b2e66a61989c298e3265c3f03b3acfe9fb5c23655bb84d76fbbdc2ae46d78973d61c90ccc1f76d2f5324b9f2fe853858b2918d1ff06 WHIRLPOOL 30bafa2e238ca0d4626baaf5ea56e5a2bd3d18cf62e56a4c302a3d58cd60921ccbe0f0cf0c57e7d2823d692fc6381ef690af54cf3ca9cb98c17124130b2ce758
-EBUILD gappa-0.16.3.ebuild 1249 SHA256 4169eb90bd2b8f65ae192d38d2d5d09f0c71f101f5cdb4323756b9f843f6b294 SHA512 4f1e81f7437e159f1827635c655f6751457b9664d5f4ba131ccce6a92a9b11de97e23187d0bfbfd5c094d4882d62a331eb7dd46f653f89893c5acaa22c087b0a WHIRLPOOL 1cd5e1b5ba55253ed81243b8792ffa093f1224bbea0ed75774a4f3df22432d0ce3460e5b96efe76fc51f545c976d2464c97330ddd4072609477966edf6e50125
-MISC ChangeLog 832 SHA256 9e6a82e9789838349858f58236cc0d904f8639c5ced0698a7592469f1e91db30 SHA512 122cf5d14145685a0387c419602faa86fbc9a36a2c9e7c0ce89054bc619ed15cad526d8dc7f4dca579bcb410af137a96237133b99cc3252853de9ac12d800e26 WHIRLPOOL 9622f0032895597bc05f7fbf5b6b64cce30202a76cfe47c05783fbf5c57c0a95d87567de103c95a9e4afa128fe195d43ece09efd69f1f12d4bbb64841b60d0b3
-MISC metadata.xml 589 SHA256 142fc30796049493ede642668385457a252dedb94690f667ccb8c7d223f3f4ee SHA512 90108ed93318a21795615ad6e8d25af954e137a13f630a55428a65f1ea2ce95e69b2fca314437cad1617f2ca583b019c6f8460f04855a470ae40ad5d56b1bbc2 WHIRLPOOL b84c1850cb562c1f3e57705c55a433f5d422623b5d25041d384f02552e0ffee947b62428c3f86a1b1c8c5139c1709d305fc4ff145696a77bbfc8e4802e8a70f0
diff --git a/sci-mathematics/htk/Manifest b/sci-mathematics/htk/Manifest
index ae4ac21fb..c9f41b030 100644
--- a/sci-mathematics/htk/Manifest
+++ b/sci-mathematics/htk/Manifest
@@ -1,2 +1,2 @@
-DIST HDecode-3.4.1.tar.gz 101930 RMD160 e792f757797758c6f2558debaf41f199f4604f60 SHA1 46aab99781e09377abc427f704777f83a482f3af SHA256 9517b25a91200e3e84ebed0d615f73715196dbfaf32ef854c2e964442175bee5
-DIST HTK-3.4.1.tar.gz 2101024 RMD160 1f8e2bd01121e938512ba92d915a89691d5f0f0a SHA1 2366e890144bca1a37a5541bb297cb609b24bbf5 SHA256 42297b036ce3a47adeab26aaa42f51ac4b370ead7f53bab75fd27a52d38ae5ac
+DIST HDecode-3.4.1.tar.gz 101930 SHA256 9517b25a91200e3e84ebed0d615f73715196dbfaf32ef854c2e964442175bee5
+DIST HTK-3.4.1.tar.gz 2101024 SHA256 42297b036ce3a47adeab26aaa42f51ac4b370ead7f53bab75fd27a52d38ae5ac
diff --git a/sci-mathematics/kayali/Manifest b/sci-mathematics/kayali/Manifest
index d0b1784d0..97eafc636 100644
--- a/sci-mathematics/kayali/Manifest
+++ b/sci-mathematics/kayali/Manifest
@@ -1 +1 @@
-DIST kayali-0.3.2.tar.gz 568917 RMD160 8aa290709473d9c35025a9f681fce50d5a6d79fc SHA1 a4b488faaf967603e7a973dcc933f35264c1b97f SHA256 797a64086bc8d6a9d8e0a8a36c6ab8391d2e3908a2667899ebb11ffd2cb7b134
+DIST kayali-0.3.2.tar.gz 568917 SHA256 797a64086bc8d6a9d8e0a8a36c6ab8391d2e3908a2667899ebb11ffd2cb7b134
diff --git a/sci-mathematics/libsfmt/Manifest b/sci-mathematics/libsfmt/Manifest
index ac69647e4..603d54cb1 100644
--- a/sci-mathematics/libsfmt/Manifest
+++ b/sci-mathematics/libsfmt/Manifest
@@ -1 +1 @@
-DIST libsfmt-1.3.0.tar.bz2 369333 RMD160 1286e08fe5830eede0e5b9133060c10190dcfa77 SHA1 20245f89cdde5a6fc261a662eda7be0fec7b9a57 SHA256 7e0b336b7096736fd7fbdcf08f2202bfb04bba271a482e5739dc41a26990fd9a
+DIST libsfmt-1.3.0.tar.bz2 369333 SHA256 7e0b336b7096736fd7fbdcf08f2202bfb04bba271a482e5739dc41a26990fd9a
diff --git a/sci-mathematics/lie/Manifest b/sci-mathematics/lie/Manifest
index 807f3f494..bd90c7fa0 100644
--- a/sci-mathematics/lie/Manifest
+++ b/sci-mathematics/lie/Manifest
@@ -1 +1 @@
-DIST conLiE.tar.gz 361170 RMD160 3a0ff7e62db3de194222d0d5bd5fab8390ef8537 SHA1 92eb9283868cc46ae0b87c4dfd6f13631e046bee SHA256 6eac244471abb730811a05c8cb0b36eb7f8285cd18a03b956dadcf80ef1f0961
+DIST conLiE.tar.gz 361170 SHA256 6eac244471abb730811a05c8cb0b36eb7f8285cd18a03b956dadcf80ef1f0961
diff --git a/sci-mathematics/ltl2ba/Manifest b/sci-mathematics/ltl2ba/Manifest
index 2a440fe1c..f91bcb6ff 100644
--- a/sci-mathematics/ltl2ba/Manifest
+++ b/sci-mathematics/ltl2ba/Manifest
@@ -1,24 +1 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
-DIST ltl2ba-1.1.tar.gz 29629 RMD160 fcc694a7a12ca500c90d94761f98f2bdce5a9747 SHA1 763325e7801037d2c1a67aba889ea97b389f7d28 SHA256 a66bf05bc3fd030f19fd0114623d263870d864793b1b0a2ccf6ab6a40e7be09b
-EBUILD ltl2ba-1.1.ebuild 607 RMD160 a6245b3b0f282ad0a43263a4db3eb24253c708f7 SHA1 e83ae399a8d5493e5779ed4c3be129c9cddb56a4 SHA256 97fe02ff595a0cab8b71fa43c3a6a5a7cd73904e0cc3b6cadba12173e3832517
-MISC ChangeLog 244 RMD160 631c3681babf56bb11a37973965f4b29966daead SHA1 dede8ea74d562d2b9b856f78e5a9cb1c7804d1f8 SHA256 8c2728eab50fd614e4fa10da7e8a571d363594a89741f9f029b32e89c6134849
-MISC metadata.xml 215 RMD160 bc9c07aa91f2f175542244e4e4522a73558210a1 SHA1 facb283386de1c0b6b938cdcd4dde04d1694298b SHA256 13f32353652adbd3d934d41381cfc2cacc9e1127c508cebc73806cc1026ee80c
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.15 (GNU/Linux)
-
-iQIcBAEBAgAGBQJMMKWZAAoJENwGBM22xffeznIQAKqRamZ8uv/wOTq2VCFMEOyK
-9FXP6IUd4787FAppgSZL4/ZDmHpV2z/rJHIdTmG9HTUJMTXKI2AEzcPIZ8PzGwS4
-sasW2u00ufEa2pypjEVxMGrJ4HijSz/p8VE3IvfoykCodXQ+F6rgaeZNe+kaX4aY
-xymgb32b3LxLtayJTKz8nk9Zsw3TdL2uRmIH7HjM4iDV6Qb+ZxYVWFbuIgL9gMqF
-lXOPPSYICo89e+UMNFikShCPTrNf0Xqq90C2kOhK2qrKNoaJ/9SU9Vn24sxZ+2zk
-dBMamI7G8PkE8JV8fNTMi8XY5iJdzKSQwHkput0ciLKB/QEx8t1KqM+o+ElZbxTC
-ujiZAA0879QpsdjmU9/VnZN+rYrZf2AUTe+vEtbqyQE8KQZOGpLgY29px3LQcHZ+
-nUgr3aP1ek3iP0l/jk2xFUbhCRFP/LcrjQ16/AeUvH/mlBhjQxdS7juet6jom3tV
-pkIhJpaOXj6YAB1SGJsxoarUpuxXuqd4dSjosovOqyGRefM4jmSsDtk0xrdQigFn
-pU9vU0taX7s3W1j3q7kJG3uDJc9KJ7koQL9m3Kpmexf1h/iCEMIgO8QVIex1mSBu
-6fITx9bcRJ4dLa22VlEBLsUgCyDEwfr7KJuFakhbjPuOuYBPcQrGQqiK5/xRm0dI
-UZ0zIwPPEFTQjvPLLY3W
-=Ld4m
------END PGP SIGNATURE-----
+DIST ltl2ba-1.1.tar.gz 29629 SHA256 a66bf05bc3fd030f19fd0114623d263870d864793b1b0a2ccf6ab6a40e7be09b
diff --git a/sci-mathematics/netgen/Manifest b/sci-mathematics/netgen/Manifest
index 0b847c29b..4f0f60dbd 100644
--- a/sci-mathematics/netgen/Manifest
+++ b/sci-mathematics/netgen/Manifest
@@ -1 +1 @@
-DIST netgen-4.9.13.tar.gz 1829916 RMD160 36553ee92e943bf9857de1880857f6618ce77228 SHA1 95eab8ab2f8ead3737586755b0f8100ce8301531 SHA256 a5f188bb0fafc0536389314efb8fe6d294b93512b54f2b67c9a3e5431c3b0412
+DIST netgen-4.9.13.tar.gz 1829916 SHA256 a5f188bb0fafc0536389314efb8fe6d294b93512b54f2b67c9a3e5431c3b0412
diff --git a/sci-mathematics/open-axiom/Manifest b/sci-mathematics/open-axiom/Manifest
index 5e5b17de4..b77753948 100644
--- a/sci-mathematics/open-axiom/Manifest
+++ b/sci-mathematics/open-axiom/Manifest
@@ -1 +1 @@
-DIST open-axiom-1.3.0.tar.bz2 11821857 RMD160 71ab5b199ae3b4331e82f4b1a549b6e3a764784a SHA1 a9e7fb441d120fe1b4cc9b12d9cc40c868f2dc8e SHA256 5c35d0c8b6da17ff2254d833c5f6694d3f5d49064e312e61719cdeb386f888c4
+DIST open-axiom-1.3.0.tar.bz2 11821857 SHA256 5c35d0c8b6da17ff2254d833c5f6694d3f5d49064e312e61719cdeb386f888c4
diff --git a/sci-mathematics/pest/Manifest b/sci-mathematics/pest/Manifest
index 0b6f2abb5..ad2cdb6d4 100644
--- a/sci-mathematics/pest/Manifest
+++ b/sci-mathematics/pest/Manifest
@@ -1,3 +1,3 @@
-DIST addendum.pdf 2443201 RMD160 ef763d847e45ae24e7af720751b1cdbcc18d4518 SHA1 0532c5f378322628560ce9b9d66161e3cd17ef79 SHA256 6ed2e518262875560584d6083fe0b51cacd653693b5c9af14c844215c1f43950
-DIST pest-12.2.tar.zip 1296848 RMD160 377e0d8c44e1eb8209a150aa29f54324fd725448 SHA1 3d2fed2594c2e1af0466dd886d741c22867b6517 SHA256 426eb71912b7e9e5f3f6ca23ae8d4969dd8fd7adb20ef3465446da0b1e50b597
-DIST pestman.pdf 2471434 RMD160 fb254ce3b12dfc820cbecc569eafdf3f4afcfc03 SHA1 aea91a38ba7ee3d8c2e9e3c4d17bb04e2c5016fa SHA256 790779982ed00cca2a014b0983f71008ba2635f6bf21f7eda67aa0d05d417e83
+DIST addendum.pdf 2443201 SHA256 6ed2e518262875560584d6083fe0b51cacd653693b5c9af14c844215c1f43950
+DIST pest-12.2.tar.zip 1296848 SHA256 426eb71912b7e9e5f3f6ca23ae8d4969dd8fd7adb20ef3465446da0b1e50b597
+DIST pestman.pdf 2471434 SHA256 790779982ed00cca2a014b0983f71008ba2635f6bf21f7eda67aa0d05d417e83
diff --git a/sci-mathematics/ufc/Manifest b/sci-mathematics/ufc/Manifest
index 4aa8fe5e3..9a54f63c4 100644
--- a/sci-mathematics/ufc/Manifest
+++ b/sci-mathematics/ufc/Manifest
@@ -1 +1 @@
-DIST ufc-1.4.2.tar.gz 560547 RMD160 4bf29555296e03faf72b20e9be3424ed622cb612 SHA1 efb076504cdd8bc236b29b8a6d54078ada79b53b SHA256 7f67e67c1e51753cbc0755db4122e2ece585af53a7869ddb670ee6aae7f2ff91
+DIST ufc-1.4.2.tar.gz 560547 SHA256 7f67e67c1e51753cbc0755db4122e2ece585af53a7869ddb670ee6aae7f2ff91
diff --git a/sci-misc/finomaton/Manifest b/sci-misc/finomaton/Manifest
index 1ff08457a..3cf18295d 100644
--- a/sci-misc/finomaton/Manifest
+++ b/sci-misc/finomaton/Manifest
@@ -1 +1 @@
-DIST finomaton-1.0.tar.gz 69681 RMD160 ff25e28299a27f50f89d22c88895c4717e9cec2b SHA1 9f79441eaf11b92e353c6ee22ac63c9198a6a15f SHA256 a4aed3796e4803f569a7e638faa5a143811af88b4e7ab4ac92d26b90d357d390
+DIST finomaton-1.0.tar.gz 69681 SHA256 a4aed3796e4803f569a7e638faa5a143811af88b4e7ab4ac92d26b90d357d390
diff --git a/sci-misc/fitscut/Manifest b/sci-misc/fitscut/Manifest
index ebc436956..731757698 100644
--- a/sci-misc/fitscut/Manifest
+++ b/sci-misc/fitscut/Manifest
@@ -1 +1 @@
-DIST fitscut-1.4.4.tar.gz 163663 RMD160 96e1a5c018a8d001f9303dbf3576ea699ab9c090 SHA1 a9fa9883069f87cc6996a7eca26e953637edbe87 SHA256 1df936af9cd36bf1cd1e3a095ecc8bec68a6974525e0f4fd0e9cccb9633728bb
+DIST fitscut-1.4.4.tar.gz 163663 SHA256 1df936af9cd36bf1cd1e3a095ecc8bec68a6974525e0f4fd0e9cccb9633728bb
diff --git a/sci-misc/jwnl/Manifest b/sci-misc/jwnl/Manifest
index 56e489dbf..5b9765601 100644
--- a/sci-misc/jwnl/Manifest
+++ b/sci-misc/jwnl/Manifest
@@ -1,2 +1,2 @@
-DIST jwnl13rc3.zip 640112 RMD160 798ce5c8a20df08d6adde44255677b5ee71708e6 SHA1 720bfd4632f0efc47b185aa06aa1da41dca342a9 SHA256 6c0cbfa0dfc19e5d773255c684398cf38970312ae955a99a128c826830a785ad
-DIST jwnl13rc3_src.zip 109993 RMD160 b091421cf771e13a2758715e888d533124b5e776 SHA1 a7755e3710287d4462dfce3ee171bad885e17b08 SHA256 d00d1102ab6c9731c48570583d6f7d21faba50a670e1d44d17fb994fd2a9e912
+DIST jwnl13rc3.zip 640112 SHA256 6c0cbfa0dfc19e5d773255c684398cf38970312ae955a99a128c826830a785ad
+DIST jwnl13rc3_src.zip 109993 SHA256 d00d1102ab6c9731c48570583d6f7d21faba50a670e1d44d17fb994fd2a9e912
diff --git a/sci-misc/kotus-sanalista/Manifest b/sci-misc/kotus-sanalista/Manifest
index 63400640b..9b077e49e 100644
--- a/sci-misc/kotus-sanalista/Manifest
+++ b/sci-misc/kotus-sanalista/Manifest
@@ -1 +1 @@
-DIST kotus-sanalista-v1-r1.tar.bz2 461303 RMD160 bb42c84880b3cea754148b2af22cb5141562f75f SHA1 27c8c59378fc070bca703e5a3f0cd2599fafc1c3 SHA256 bb03e3e858c6777867cf2379d4215dc221d22711ec54b54b21b9e9bb84d48d4a
+DIST kotus-sanalista-v1-r1.tar.bz2 461303 SHA256 bb03e3e858c6777867cf2379d4215dc221d22711ec54b54b21b9e9bb84d48d4a
diff --git a/sci-misc/nltk/Manifest b/sci-misc/nltk/Manifest
index 02812c79d..06239e942 100644
--- a/sci-misc/nltk/Manifest
+++ b/sci-misc/nltk/Manifest
@@ -1 +1 @@
-DIST nltk-2.0.1rc1.zip 1095096 RMD160 7548789676c355caaa0f04feb82cccaa4ca19b81 SHA1 8985c3aeb2ec0d183b2df80319853122247c1ee6 SHA256 ab26d1a93b783c26bd234ecaeef250b8a5f35b601810d0b78e24c52e749627e7
+DIST nltk-2.0.1rc1.zip 1095096 SHA256 ab26d1a93b783c26bd234ecaeef250b8a5f35b601810d0b78e24c52e749627e7
diff --git a/sci-misc/omorfi/Manifest b/sci-misc/omorfi/Manifest
index 9419b2187..991004f5a 100644
--- a/sci-misc/omorfi/Manifest
+++ b/sci-misc/omorfi/Manifest
@@ -1 +1 @@
-DIST omorfi-0.1-alpha.tar.bz2 110111 RMD160 84ab308595cb3f0fe3621bb1ed274b592f086eb6 SHA1 0e542c991dbbe1b61f7596863d23c03928f40319 SHA256 6f4149f980fcb5075f8fb40bee107b7b5359070fa0694c73e2f7a96951966c5e
+DIST omorfi-0.1-alpha.tar.bz2 110111 SHA256 6f4149f980fcb5075f8fb40bee107b7b5359070fa0694c73e2f7a96951966c5e
diff --git a/sci-misc/opennlp-maxent/Manifest b/sci-misc/opennlp-maxent/Manifest
index 0c457263d..9b0886757 100644
--- a/sci-misc/opennlp-maxent/Manifest
+++ b/sci-misc/opennlp-maxent/Manifest
@@ -1 +1 @@
-DIST maxent-2.4.0.tgz 1242290 RMD160 ed45c33fdf41a9f898a69f95573b63042b5ab863 SHA1 695f7202491da92896527ff8257ce8d301c66f35 SHA256 9956e9bd0ed0fe4a82dd26190876c23897fab25c8035c7e0b23f7239acff4db1
+DIST maxent-2.4.0.tgz 1242290 SHA256 9956e9bd0ed0fe4a82dd26190876c23897fab25c8035c7e0b23f7239acff4db1
diff --git a/sci-misc/opennlp-tools/Manifest b/sci-misc/opennlp-tools/Manifest
index c1ed5e643..1b50a25d9 100644
--- a/sci-misc/opennlp-tools/Manifest
+++ b/sci-misc/opennlp-tools/Manifest
@@ -1,44 +1,44 @@
-DIST EnglishChunk.bin.gz 2529886 RMD160 442b1b2d4e3e88f620d6dcbce855ff38a2c88370 SHA1 1f57f19f13d51bf1584e1ba978158de36a39b351 SHA256 c2311f3d2e69aa13fa7c0c8e8b0d18b765a79a118da92bcfedc0702e63279c61
-DIST EnglishSD.bin.gz 105687 RMD160 f8d438ecca941da9d8e56d51709c6af1b4d87bca SHA1 35bc048f7efac92abb6d9d95820671babe875c6a SHA256 e7192ae62454b73cf8e708e170c2416415529b9336889f3851dcae79b026e67f
-DIST EnglishTok.bin.gz 436785 RMD160 8fe7edaa45f946fabbdd1f8f897630d292d6e26b SHA1 12e8446a7a58a93972b4a45852be67aee66b1eaa SHA256 4d565ec5504f8b5fce80831050940374d8c179171b744aef14380ecc92c07bc9
-DIST SpanishPOS.bin.gz 694063 RMD160 758384f3a1c0c30918664da23dd8afab40a38732 SHA1 26c54d8734163e3b25ad4895598b24d3c8fabedf SHA256 fd12287c63c93a9fa3dc99dec1329994cd954f65cddc889d579f3530a9d20224
-DIST SpanishSent.bin.gz 4094 RMD160 686b00e99f6a8dbb029c4b7fe07e9360ff2447b4 SHA1 67889443cb53f98bf43bf6686b6b6e7468264f43 SHA256 3235ad77f33e6c2f0f0b2486b957b003d2e5d4bddafc33b4d956c6f877415497
-DIST SpanishTok.bin.gz 177856 RMD160 9dc92bdc2e94a1887606d08ab7ce323a7986d750 SHA1 c89ed2a386b1d58b41687a52d518e2d7680e9b10 SHA256 2b3728bdafe5be2005f43d0abb9c8d2201c966870e6536eb89c9dcbb2648af0c
-DIST SpanishTokChunk.bin.gz 327811 RMD160 bace3ac15c247042e9df9f121403c6b2aaf0a113 SHA1 f229e5e331afa3d8c89dc64d393ae0bddbc450ed SHA256 4dc2edfce3066b5175fcec507c9c000285367e3306b1cab65c2b879d0b87fba7
-DIST acronyms 453012 RMD160 43283d1d1cf35f539fbc61fc2e9ae62ac9c77941 SHA1 ff633b072d59c5681dff1135324ffd0535d00cd3 SHA256 97ce3e577504837ee4081230f24f9f1b84a9cc45198baf2ded2fd8f8bfec78c5
-DIST build.bin.gz 18179269 RMD160 1311c5d92659c15ac2017c83749b48afc00354e6 SHA1 38d542a968709b6610a0829271f8277dc019a619 SHA256 bd416001fd598154393c03b20aa3fd2fb14a40e49b679b05050ae6ce6f85f2a7
-DIST check.bin.gz 4363935 RMD160 7e129e41cbbb9102807fd95b7fe23fe7ed11e581 SHA1 db09df2bf66d29a9c845b51c8a07f24e5e2faadf SHA256 38439667520335786170121103bf0d94afda0c20323fd4d86685c0a874e453ea
-DIST chunk.bin.gz 6064878 RMD160 e5b4a75c727093bdb837e6ae9cfb01805ca64b77 SHA1 9c261dd4ee5582cc919e8274bca7de6b43b26361 SHA256 e9290c28624f7b2c00764356c164223ac2644636997182f8f273f211cf8a656e
-DIST cmodel.bin.gz 15563 RMD160 c6add3b3135f52185142d8087f5fc395f5881264 SHA1 2eaf4d04505eb193056101c90ccb06d4c8e299a1 SHA256 0a71602e050e4d35f8bdc413c760a503c0e4427e7be3b15879cd6f6f827913bf
-DIST cmodel.nr.bin.gz 5254 RMD160 842474778ce5f7041becc04357f18a8bffb5f75c SHA1 87602ff04b1e9ce5979e40f3ba91832eadbba492 SHA256 f3e3cef7e09f0a8b44c7c0869104d541e5a9aedaac265751532f709939835d9c
-DIST date.bin.gz 3936608 RMD160 917ee185a8feafefc1268e3ed4cbd1aff7c059e5 SHA1 a7f6cb7087ad0405174777b4406e732b009d56b3 SHA256 8a5f8ad9d95598e5b1063b1057b750bb0fa539d32dc2472955bcaab89bf3ba6c
-DIST defmodel.bin.gz 27835 RMD160 40e079ebbea05e2a0f25b1c8b971c9a1f63fc7fa SHA1 a0fe3aca16ad840e809cb8fe2a10b1e563919306 SHA256 f775130834a4e114911dee76dfb8ce51aae2f75c17cd280d942e9e166a8b95ea
-DIST defmodel.nr.bin.gz 4806 RMD160 8cdeb92c1d532b0cc3e71b244e6b9d0f78e5818e SHA1 ddb902a733317a9dcf9f542ca7adbf6a181bee53 SHA256 b7e226784bba511b3bee3cced13aec81f811b3b864a6d31dccb96373344c53dc
-DIST dict.bin.gz 702108 RMD160 525839aa9fb88dee238dbf835396313c57920cb4 SHA1 9f062fda84126a31239c561ec6b241f3cdd88bb7 SHA256 3fcdca141aaad5d3e37114d85b431cdf05cefcbc973346d3ef52c51287c9da0a
-DIST fmodel.bin.gz 585 RMD160 a19df9a806e8590bce6b0bbb9eecd62bbfdf0289 SHA1 0a0d365da1cf37cac94bb09167a2da80698e09c6 SHA256 a1b730018b918892687c9e74eef005a123b5f832aadd6655b171929658e16605
-DIST fmodel.nr.bin.gz 485 RMD160 60200b5c9f10730480204dd393e794569915ae75 SHA1 616807620937aa8d80cd75b5bf4a6204a60e1555 SHA256 f4452c792202a97ddd2f831dd01adc48372d2000f5408383733efa891e77ea20
-DIST gen.bin.gz 38049 RMD160 3f5b914906c290b67bced37420f04f0f8b427459 SHA1 fe8dfc040cab3718192f3d673f1564bba593919a SHA256 4e297b6c109d3d6f2554b0a84fabebd75523138cc18738d27d0043c557dc2462
-DIST gen.fem 29042 RMD160 91c7c85a6dddd9ba876cb34c030446e69f6ee4d0 SHA1 8fa3db9cf4d2e7842584ae145526c71a94dc35fb SHA256 211d0480cbad1a01d8ea3629fb68a45f78ca488125b6e05e78c315d1eb76e0ae
-DIST gen.mas 7919 RMD160 db6c3447e93f443a28314b52a36739d93ad13b78 SHA1 3a073bf7bb277767644a592444970221ff89d984 SHA256 79ff8e58586f950b57688cf3b7e47ae3c3ace6b5d609f2decbeeed6a894daf6e
-DIST head_rules 746 RMD160 13194254e6effaee94132eaaf03212f0737a5935 SHA1 ebedd3d10b22b6d92da2ea5254608807f930fd50 SHA256 8debf862bd40ea19b40173a04db82cad609b90fc2f6913af52282d33e0ef9389
-DIST imodel.bin.gz 3644 RMD160 38d719dfa0875301cefff53a394bab21842875d5 SHA1 dc92ee6bdacb0d2f1259a1867a87a41088d2287d SHA256 9d4c67070b389752302c5f0b80b178920b5601e4db51c45f0d4102835414bfb0
-DIST imodel.nr.bin.gz 1584 RMD160 805093f32bed70204e32954296b99d33d5742761 SHA1 9e2449df09bc33720e905d4995c2381200f44070 SHA256 4b75777f7cf1920891b4856db375196ffd58c2b677ff7e2ce3fd87962bc98b9f
-DIST location.bin.gz 4055537 RMD160 1fe80df7bf23f0cac95b61a2c3f6152730b5f0b8 SHA1 48b0290b788daede1f155940c3be87c259480d19 SHA256 e2da273f549151dc3dd4424f9387944c85e4db060f2a1743545cd10b21a58011
-DIST money.bin.gz 3720038 RMD160 8d0d1d5126103b26af4e58ac4e801b0413034a83 SHA1 9e422b66729e531257c471292bf6ef260cc432cd SHA256 7a7095361318d2d80f959331305c54df83f8c6aeabe326bad54b560893bf17b0
-DIST num.bin.gz 1611 RMD160 1cd654397af508dd81f6db019fc603388317aef5 SHA1 325a111b97acc6d388766de565abcfe1d94d0499 SHA256 b63e0f2db567339c38b4fd12dd84d6393827354cf9d5687deb794d6ba7e73855
-DIST opennlp-tools-1.3.0.tgz 1907626 RMD160 0fe382cc6a4061605e69ace23d190c7730db5cff SHA1 a7de0e5278eb3761bc1fdbed0ad66c2d04766795 SHA256 7e036443ba53b2b6310d228fd75c7c781d7ad91201ad956dca25b008a79f4f93
-DIST organization.bin.gz 4272798 RMD160 6b8bc6df2fb0e1496f19e0eeaebb6bdddbdeb756 SHA1 0d5666afea78190efa174b0ab2d911a1a2dee314 SHA256 3bfd2cd84959e15ebbfb1881f4c2243db21fa45737735ad9ae8d4e709b6fcc21
-DIST percentage.bin.gz 3635483 RMD160 7a76df491962373eef75931ca5252463f83a0b4b SHA1 13456aa94ecae963692150d6b3d5404a6d144b5c SHA256 af4cce328f52722fa85ab8bc55071e7c91c26c7991370058a90878da4bc779fd
-DIST person.bin.gz 4157004 RMD160 a6c14bd9a7cdbdc917dd09654ded0c799a0ff018 SHA1 84895a9bf294c9599193fe4ed8f8f8e1ea10fadb SHA256 969dcab0d1896d5fe4809ad8d9bee1e2f3975b53b90603c999e61ff6e1b3dd71
-DIST plmodel.bin.gz 13375 RMD160 b53b80c07f2a74480d407ac3727d6627398efd77 SHA1 7e97ce049599ddbc613ecd1837fa7b914e3cab29 SHA256 848b4a9af3799040f0aaf8d54b0aface3950241688af4a04919ba1a9a9e649b6
-DIST plmodel.nr.bin.gz 4704 RMD160 ac44a3ff09360ef689c954b3b49a1c45df3be257 SHA1 b7c006c1d620852e0ccaf4bc3bad75df75cb959d SHA256 35d396c8fdf018c20fa30de27d0ab0afefa87bda129538b220355ae2b66083f1
-DIST pmodel.bin.gz 6715 RMD160 74cd1e523c555bf527977500e55a565d9a8b96fc SHA1 76504d57069c1ceaf7c05ba4cbc5e0b242f13a9a SHA256 9b7802128f2a6fc7c4e16abbcdcc3f2664dfca46124d3038b189704aa748175f
-DIST pmodel.nr.bin.gz 1354 RMD160 417d780e8340736d8a236e3e8895504340583d1d SHA1 569e42be01e6045d1cab4f316796145ff203c537 SHA256 291bfdca67f70b5728b87bedd5320def81613df9ed8664c9cefcb7994baafbae
-DIST pnmodel.bin.gz 1291 RMD160 53992b0185a179010b4f0d51587f62235e5075e2 SHA1 b6b5ceed5dc7184da51521f729ea9cec1517438b SHA256 6a30740008c2a6337837db8783cf4cd781d3f9f5418a2890bb331c4f7bc14261
-DIST pnmodel.nr.bin.gz 5529 RMD160 353f3c604ba6cdb34f952a1ca8f911c8c86da877 SHA1 25f47ac3f90506784cc55968ea6e584991363ed8 SHA256 945f12d7ba3b05d935da66c86352a40ec499c4988806a4df3ea098b67be4aa3a
-DIST sim.bin.gz 27707 RMD160 33c7ef228c2e3a486976abc3c8d9a884c55113f6 SHA1 b4f6ff885c15b3061b9328bea91eefa1dda5b79b SHA256 e64bf5a7dac32299a617abfdac2b6528282cbaa7d2009d72936a73d464631f7f
-DIST tag.bin.gz 5674885 RMD160 85a8148fd196f2a24b09c18f2bfe8f1fa4f0e3f9 SHA1 9157a1c6a1eca523350f717d81ff69c6a235abe1 SHA256 2a1fcd44e41cf4e9683eae5f7ba7f3e9f12a22cd6f48ba130183034a7f73669f
-DIST tagdict 213785 RMD160 a56cd181c58114d4a5758ce79569c97770a5e834 SHA1 89462baa6dbe19c2bc0914d37f311507811f7376 SHA256 2755b40a2a9cf1c2f2b3d8cb9399a7e3e79a429ea56a56bcc725dc30d23806c9
-DIST time.bin.gz 3622921 RMD160 71926ba19cdadc8ad50b528c6bae909d4cceb5db SHA1 8369ce6e14cb1bc2477e4d1fdbfccc09043ac5bd SHA256 c3dda43a836ee38c9d71ab55f6965a3d9d0fc174b276f96dd5df15895e435c53
-DIST tmodel.bin.gz 4809 RMD160 3e757e0634bf3757e6224a7daecfe6ef57f2ca74 SHA1 582b476d315cce15e5fb9722908da410e6e108f5 SHA256 0eacf313641d851bec8044838b9350a70bfa96332e00e115744ff0a84df08937
-DIST tmodel.nr.bin.gz 588 RMD160 44d334cc38f4c6af4ea354af995ac4875e151d2e SHA1 7ab75dbafd5e043f986c3b6b0cf4d78517b50c3c SHA256 850637e0cd688ee4dfada0840bdb0b12d5c6e72cc16fdd0b53043a7b4d03e2f5
+DIST EnglishChunk.bin.gz 2529886 SHA256 c2311f3d2e69aa13fa7c0c8e8b0d18b765a79a118da92bcfedc0702e63279c61
+DIST EnglishSD.bin.gz 105687 SHA256 e7192ae62454b73cf8e708e170c2416415529b9336889f3851dcae79b026e67f
+DIST EnglishTok.bin.gz 436785 SHA256 4d565ec5504f8b5fce80831050940374d8c179171b744aef14380ecc92c07bc9
+DIST SpanishPOS.bin.gz 694063 SHA256 fd12287c63c93a9fa3dc99dec1329994cd954f65cddc889d579f3530a9d20224
+DIST SpanishSent.bin.gz 4094 SHA256 3235ad77f33e6c2f0f0b2486b957b003d2e5d4bddafc33b4d956c6f877415497
+DIST SpanishTok.bin.gz 177856 SHA256 2b3728bdafe5be2005f43d0abb9c8d2201c966870e6536eb89c9dcbb2648af0c
+DIST SpanishTokChunk.bin.gz 327811 SHA256 4dc2edfce3066b5175fcec507c9c000285367e3306b1cab65c2b879d0b87fba7
+DIST acronyms 453012 SHA256 97ce3e577504837ee4081230f24f9f1b84a9cc45198baf2ded2fd8f8bfec78c5
+DIST build.bin.gz 18179269 SHA256 bd416001fd598154393c03b20aa3fd2fb14a40e49b679b05050ae6ce6f85f2a7
+DIST check.bin.gz 4363935 SHA256 38439667520335786170121103bf0d94afda0c20323fd4d86685c0a874e453ea
+DIST chunk.bin.gz 6064878 SHA256 e9290c28624f7b2c00764356c164223ac2644636997182f8f273f211cf8a656e
+DIST cmodel.bin.gz 15563 SHA256 0a71602e050e4d35f8bdc413c760a503c0e4427e7be3b15879cd6f6f827913bf
+DIST cmodel.nr.bin.gz 5254 SHA256 f3e3cef7e09f0a8b44c7c0869104d541e5a9aedaac265751532f709939835d9c
+DIST date.bin.gz 3936608 SHA256 8a5f8ad9d95598e5b1063b1057b750bb0fa539d32dc2472955bcaab89bf3ba6c
+DIST defmodel.bin.gz 27835 SHA256 f775130834a4e114911dee76dfb8ce51aae2f75c17cd280d942e9e166a8b95ea
+DIST defmodel.nr.bin.gz 4806 SHA256 b7e226784bba511b3bee3cced13aec81f811b3b864a6d31dccb96373344c53dc
+DIST dict.bin.gz 702108 SHA256 3fcdca141aaad5d3e37114d85b431cdf05cefcbc973346d3ef52c51287c9da0a
+DIST fmodel.bin.gz 585 SHA256 a1b730018b918892687c9e74eef005a123b5f832aadd6655b171929658e16605
+DIST fmodel.nr.bin.gz 485 SHA256 f4452c792202a97ddd2f831dd01adc48372d2000f5408383733efa891e77ea20
+DIST gen.bin.gz 38049 SHA256 4e297b6c109d3d6f2554b0a84fabebd75523138cc18738d27d0043c557dc2462
+DIST gen.fem 29042 SHA256 211d0480cbad1a01d8ea3629fb68a45f78ca488125b6e05e78c315d1eb76e0ae
+DIST gen.mas 7919 SHA256 79ff8e58586f950b57688cf3b7e47ae3c3ace6b5d609f2decbeeed6a894daf6e
+DIST head_rules 746 SHA256 8debf862bd40ea19b40173a04db82cad609b90fc2f6913af52282d33e0ef9389
+DIST imodel.bin.gz 3644 SHA256 9d4c67070b389752302c5f0b80b178920b5601e4db51c45f0d4102835414bfb0
+DIST imodel.nr.bin.gz 1584 SHA256 4b75777f7cf1920891b4856db375196ffd58c2b677ff7e2ce3fd87962bc98b9f
+DIST location.bin.gz 4055537 SHA256 e2da273f549151dc3dd4424f9387944c85e4db060f2a1743545cd10b21a58011
+DIST money.bin.gz 3720038 SHA256 7a7095361318d2d80f959331305c54df83f8c6aeabe326bad54b560893bf17b0
+DIST num.bin.gz 1611 SHA256 b63e0f2db567339c38b4fd12dd84d6393827354cf9d5687deb794d6ba7e73855
+DIST opennlp-tools-1.3.0.tgz 1907626 SHA256 7e036443ba53b2b6310d228fd75c7c781d7ad91201ad956dca25b008a79f4f93
+DIST organization.bin.gz 4272798 SHA256 3bfd2cd84959e15ebbfb1881f4c2243db21fa45737735ad9ae8d4e709b6fcc21
+DIST percentage.bin.gz 3635483 SHA256 af4cce328f52722fa85ab8bc55071e7c91c26c7991370058a90878da4bc779fd
+DIST person.bin.gz 4157004 SHA256 969dcab0d1896d5fe4809ad8d9bee1e2f3975b53b90603c999e61ff6e1b3dd71
+DIST plmodel.bin.gz 13375 SHA256 848b4a9af3799040f0aaf8d54b0aface3950241688af4a04919ba1a9a9e649b6
+DIST plmodel.nr.bin.gz 4704 SHA256 35d396c8fdf018c20fa30de27d0ab0afefa87bda129538b220355ae2b66083f1
+DIST pmodel.bin.gz 6715 SHA256 9b7802128f2a6fc7c4e16abbcdcc3f2664dfca46124d3038b189704aa748175f
+DIST pmodel.nr.bin.gz 1354 SHA256 291bfdca67f70b5728b87bedd5320def81613df9ed8664c9cefcb7994baafbae
+DIST pnmodel.bin.gz 1291 SHA256 6a30740008c2a6337837db8783cf4cd781d3f9f5418a2890bb331c4f7bc14261
+DIST pnmodel.nr.bin.gz 5529 SHA256 945f12d7ba3b05d935da66c86352a40ec499c4988806a4df3ea098b67be4aa3a
+DIST sim.bin.gz 27707 SHA256 e64bf5a7dac32299a617abfdac2b6528282cbaa7d2009d72936a73d464631f7f
+DIST tag.bin.gz 5674885 SHA256 2a1fcd44e41cf4e9683eae5f7ba7f3e9f12a22cd6f48ba130183034a7f73669f
+DIST tagdict 213785 SHA256 2755b40a2a9cf1c2f2b3d8cb9399a7e3e79a429ea56a56bcc725dc30d23806c9
+DIST time.bin.gz 3622921 SHA256 c3dda43a836ee38c9d71ab55f6965a3d9d0fc174b276f96dd5df15895e435c53
+DIST tmodel.bin.gz 4809 SHA256 0eacf313641d851bec8044838b9350a70bfa96332e00e115744ff0a84df08937
+DIST tmodel.nr.bin.gz 588 SHA256 850637e0cd688ee4dfada0840bdb0b12d5c6e72cc16fdd0b53043a7b4d03e2f5
diff --git a/sci-misc/pywordnet/Manifest b/sci-misc/pywordnet/Manifest
index 3173a8765..f3b1a22d1 100644
--- a/sci-misc/pywordnet/Manifest
+++ b/sci-misc/pywordnet/Manifest
@@ -1 +1 @@
-DIST pywordnet-2.0.1.tar.gz 38052 RMD160 7db7bd8943835dc0557fc2d91b3c93a161a8197d SHA1 145b8d5149786a693377cf3e0eaa32381631e772 SHA256 02fa970e65f4807810d1f81dbec0bd3fbc63cdd68c716e4ddea938c9323893a2
+DIST pywordnet-2.0.1.tar.gz 38052 SHA256 02fa970e65f4807810d1f81dbec0bd3fbc63cdd68c716e4ddea938c9323893a2
diff --git a/sci-misc/salome-kernel/Manifest b/sci-misc/salome-kernel/Manifest
index 12236e6df..7914a3ca2 100644
--- a/sci-misc/salome-kernel/Manifest
+++ b/sci-misc/salome-kernel/Manifest
@@ -1,2 +1,2 @@
-DIST src5.1.3.tar.gz 106470135 RMD160 f46ac847ab57c76df524ddf358b887662fc862cf SHA1 643c775f90277314983747e002918ee5b826db90 SHA256 78ce2acc9cfa474e030723674f4420c420fd2de926b1939455c3716f1fd48a2b
-DIST src5.1.4.tar.gz 120063320 RMD160 c309cebcc4808071d72b5a335185002d69d1420f SHA1 a8b922424af634bda35269e6049a1262e27fc260 SHA256 dd59384ad4fbbbe49c72e946eed9e0f6144a01c799efab62033113a3db46eeae
+DIST src5.1.3.tar.gz 106470135 SHA256 78ce2acc9cfa474e030723674f4420c420fd2de926b1939455c3716f1fd48a2b
+DIST src5.1.4.tar.gz 120063320 SHA256 dd59384ad4fbbbe49c72e946eed9e0f6144a01c799efab62033113a3db46eeae
diff --git a/sci-misc/salome-pycalculator/Manifest b/sci-misc/salome-pycalculator/Manifest
index 12236e6df..7914a3ca2 100644
--- a/sci-misc/salome-pycalculator/Manifest
+++ b/sci-misc/salome-pycalculator/Manifest
@@ -1,2 +1,2 @@
-DIST src5.1.3.tar.gz 106470135 RMD160 f46ac847ab57c76df524ddf358b887662fc862cf SHA1 643c775f90277314983747e002918ee5b826db90 SHA256 78ce2acc9cfa474e030723674f4420c420fd2de926b1939455c3716f1fd48a2b
-DIST src5.1.4.tar.gz 120063320 RMD160 c309cebcc4808071d72b5a335185002d69d1420f SHA1 a8b922424af634bda35269e6049a1262e27fc260 SHA256 dd59384ad4fbbbe49c72e946eed9e0f6144a01c799efab62033113a3db46eeae
+DIST src5.1.3.tar.gz 106470135 SHA256 78ce2acc9cfa474e030723674f4420c420fd2de926b1939455c3716f1fd48a2b
+DIST src5.1.4.tar.gz 120063320 SHA256 dd59384ad4fbbbe49c72e946eed9e0f6144a01c799efab62033113a3db46eeae
diff --git a/sci-misc/stanford-parser/Manifest b/sci-misc/stanford-parser/Manifest
index 2a2d0c475..af1a755e2 100644
--- a/sci-misc/stanford-parser/Manifest
+++ b/sci-misc/stanford-parser/Manifest
@@ -1 +1 @@
-DIST stanford-parser-2007-08-19.tar.gz 60783166 RMD160 8cc8b766356737c9d8482712339cc587c9c5961f SHA1 81adc099f7ee928ce95b5f5c2dfb5710f5b65fbf SHA256 e84d5db529c25c4833e1c30abf8fd66e576b7afa92ecbb570a0c709a39364081
+DIST stanford-parser-2007-08-19.tar.gz 60783166 SHA256 e84d5db529c25c4833e1c30abf8fd66e576b7afa92ecbb570a0c709a39364081
diff --git a/sci-misc/stanford-tagger/Manifest b/sci-misc/stanford-tagger/Manifest
index b9c734f63..3ecdbed38 100644
--- a/sci-misc/stanford-tagger/Manifest
+++ b/sci-misc/stanford-tagger/Manifest
@@ -1 +1 @@
-DIST postagger-2006-05-21.tar.gz 10722420 RMD160 ee618b10c6fb9eedfaa7a0614738df2f2ed439b8 SHA1 8e397f79fbdb617131588a0ea88513c214617633 SHA256 944fa0f68d3b2d994817d535fd363483b0e3a1fa98cac5adb0b528c383105e8a
+DIST postagger-2006-05-21.tar.gz 10722420 SHA256 944fa0f68d3b2d994817d535fd363483b0e3a1fa98cac5adb0b528c383105e8a
diff --git a/sci-physics/qcl/Manifest b/sci-physics/qcl/Manifest
index c91d7061d..8f7597e7f 100644
--- a/sci-physics/qcl/Manifest
+++ b/sci-physics/qcl/Manifest
@@ -1,4 +1,4 @@
-DIST qcl-0.6.3.tgz 133786 RMD160 949a6d02224676cbd3f879801e22902347dc8296 SHA1 16ca54239d5f742a49ba400eeb766f6267a4f13a SHA256 c9f459b265ca181fdd4023cfb0d41a93a245eb5d47948a4002263384658d7cbb
-DIST qcldoc.pdf 435240 RMD160 6bbad4ec0c90f3bdd744014149699230a23f2b76 SHA1 97ba7d7f963ada3ea305f52ad4c61c0cba3f6df8 SHA256 a47f7e814b7848ba54d9e3749b66cc727376758dfdcb98c66531be01540f5886
-DIST quprog.pdf 529617 RMD160 94f98069519b7154fe6210487fd0844645d9c6b4 SHA1 dbb8c4181ca89014299073adbecabb979201475a SHA256 d201296097d649b42da56fc713f7242b6786402ed936c28054eb530840d379ec
-DIST structquprog.pdf 662519 RMD160 6b1a3db3bcbeebbc0fc5e307f1208448598bb685 SHA1 06fab1a73be823b55d4902b421787ed833f99521 SHA256 0e5ea3f025c9c5eecb75ac1e408188ed1579aced1f4a45bbe7ff7b1b849d1c42
+DIST qcl-0.6.3.tgz 133786 SHA256 c9f459b265ca181fdd4023cfb0d41a93a245eb5d47948a4002263384658d7cbb
+DIST qcldoc.pdf 435240 SHA256 a47f7e814b7848ba54d9e3749b66cc727376758dfdcb98c66531be01540f5886
+DIST quprog.pdf 529617 SHA256 d201296097d649b42da56fc713f7242b6786402ed936c28054eb530840d379ec
+DIST structquprog.pdf 662519 SHA256 0e5ea3f025c9c5eecb75ac1e408188ed1579aced1f4a45bbe7ff7b1b849d1c42
diff --git a/sci-visualization/nodemon/Manifest b/sci-visualization/nodemon/Manifest
index 55a6356ac..d938e4d8d 100644
--- a/sci-visualization/nodemon/Manifest
+++ b/sci-visualization/nodemon/Manifest
@@ -1 +1 @@
-DIST nodemon-0.3.5.tar.gz 697412 RMD160 fd9f1a7cb30f25094ea811d89e018d1347d606c3 SHA1 ebf1bfee415ce2c34ac0cbd6c39a9658ae060dd0 SHA256 c8c9eea2860a0a15910b8aed4aa0a58c5175b8750d03bd51eb0beff16e070f1f
+DIST nodemon-0.3.5.tar.gz 697412 SHA256 c8c9eea2860a0a15910b8aed4aa0a58c5175b8750d03bd51eb0beff16e070f1f
diff --git a/sys-cluster/ganglia_jobmonarch/Manifest b/sys-cluster/ganglia_jobmonarch/Manifest
index 8109943e6..dfdaf0354 100644
--- a/sys-cluster/ganglia_jobmonarch/Manifest
+++ b/sys-cluster/ganglia_jobmonarch/Manifest
@@ -1 +1 @@
-DIST ganglia_jobmonarch-0.3.1.tar.bz2 113717 RMD160 9078550c4812dd5e55a4feae14a01e80a0b71d8a SHA1 cc40abe15d11dbe51c60ea23999614299813b77f SHA256 606911b14c367dd44ce2e180d88876b5fe6db006d4cec9d9ab9556c597e909c3
+DIST ganglia_jobmonarch-0.3.1.tar.bz2 113717 SHA256 606911b14c367dd44ce2e180d88876b5fe6db006d4cec9d9ab9556c597e909c3
diff --git a/sys-cluster/nullmpi/Manifest b/sys-cluster/nullmpi/Manifest
index 0504214ee..a5a3e5837 100644
--- a/sys-cluster/nullmpi/Manifest
+++ b/sys-cluster/nullmpi/Manifest
@@ -1 +1 @@
-DIST nullmpi-0.7.tar.gz 148188 RMD160 feb30a64fdaf4555626e73ae3250d43e59abeffa SHA1 9a27e4b85d6675f763cc65ef70bdb6dff860ffb6 SHA256 88d6d09db717e22627fa7f225225f807d9315e611b903d2076ab0c83e74c8c96
+DIST nullmpi-0.7.tar.gz 148188 SHA256 88d6d09db717e22627fa7f225225f807d9315e611b903d2076ab0c83e74c8c96
diff --git a/sys-cluster/pyslice/Manifest b/sys-cluster/pyslice/Manifest
index 2247f5cdf..713fc793b 100644
--- a/sys-cluster/pyslice/Manifest
+++ b/sys-cluster/pyslice/Manifest
@@ -1 +1 @@
-DIST pyslice-1.6.4.tar.gz 37272 RMD160 a00229401cb47acd68e6754283216856c3454e05 SHA1 a79230603fc21a9ce8617aefdf97dc1c9b6f1921 SHA256 72c5e759e1f12de0dfe663a3404c4dcf67aca2af4b6eb60de75e50f3372bfac3
+DIST pyslice-1.6.4.tar.gz 37272 SHA256 72c5e759e1f12de0dfe663a3404c4dcf67aca2af4b6eb60de75e50f3372bfac3
diff --git a/sys-devel/gdebugger/Manifest b/sys-devel/gdebugger/Manifest
index a5beb693b..d3427aab6 100644
--- a/sys-devel/gdebugger/Manifest
+++ b/sys-devel/gdebugger/Manifest
@@ -1,2 +1,2 @@
-DIST AMDgDEBugger6.2.438x86.tar.gz 26645419 RMD160 2737291e9d4d8e82b76a7a4057279f22f80c20f5 SHA1 818a707e047e96007fd1bb0777af35c2907bdd05 SHA256 659c544eaf80a9bd1e33aa685a30b5fff8cd75117fef45dd14008fb966e4edbb SHA512 b2d1e048c1319b4060398c354b970977896babb9aeebe628f0f8528e7c201e8c3114c5a024d7c1eeacb42f326b5fc69df7513488b4070e3c055a8f234cb9a56e WHIRLPOOL 7156292a1210af572fc73c0bc6e0b9aa99f409be072719ff417c429745ace4e5af78bf5fd06173026a8176b63314b74780c59a13d958fa8f8171b1e29d411e64
-DIST AMDgDEBugger6.2.438x86_64.tar.gz 26814026 RMD160 5733180f7af66c099d955bd587a4d4bc1dc480e7 SHA1 8e069a09976d1136a45a25334c8c70e4261796f1 SHA256 78d67e68b441fea446d22bd49e192bd561973ce734589e05e0c610ba5870120c SHA512 b6b601894354636b95fa3280393b23f78315b5369117a2749d7ec75bd7d46adff5422201e8e8159325c0ae5e01f3f89b5500dfef733b5505358486aaba07593b WHIRLPOOL 79bfe124dde3d77b9679edc2b8135cea81f12cd84071323d40ea4cfce7b7fbafcac257ce00ddc75c4209bc416e092932975edc4cdb01728ffd12666342fde684
+DIST AMDgDEBugger6.2.438x86.tar.gz 26645419 SHA256 659c544eaf80a9bd1e33aa685a30b5fff8cd75117fef45dd14008fb966e4edbb SHA512 b2d1e048c1319b4060398c354b970977896babb9aeebe628f0f8528e7c201e8c3114c5a024d7c1eeacb42f326b5fc69df7513488b4070e3c055a8f234cb9a56e WHIRLPOOL 7156292a1210af572fc73c0bc6e0b9aa99f409be072719ff417c429745ace4e5af78bf5fd06173026a8176b63314b74780c59a13d958fa8f8171b1e29d411e64
+DIST AMDgDEBugger6.2.438x86_64.tar.gz 26814026 SHA256 78d67e68b441fea446d22bd49e192bd561973ce734589e05e0c610ba5870120c SHA512 b6b601894354636b95fa3280393b23f78315b5369117a2749d7ec75bd7d46adff5422201e8e8159325c0ae5e01f3f89b5500dfef733b5505358486aaba07593b WHIRLPOOL 79bfe124dde3d77b9679edc2b8135cea81f12cd84071323d40ea4cfce7b7fbafcac257ce00ddc75c4209bc416e092932975edc4cdb01728ffd12666342fde684
diff --git a/sys-infiniband/librxe/Manifest b/sys-infiniband/librxe/Manifest
index 0d9207cce..d545ee44a 100644
--- a/sys-infiniband/librxe/Manifest
+++ b/sys-infiniband/librxe/Manifest
@@ -1 +1 @@
-DIST librxe-1.0.0.tar.gz 311559 RMD160 a955ee0256b236f7ca8a223646ef48d899d5b768 SHA1 f4200c0208159f04e5fa853fa2fb07bfdbfb20a5 SHA256 f9a1af980d6a2c91b857f85db70a784734e6e48eda5389676e38951013086388
+DIST librxe-1.0.0.tar.gz 311559 SHA256 f9a1af980d6a2c91b857f85db70a784734e6e48eda5389676e38951013086388
diff --git a/x11-libs/tr/Manifest b/x11-libs/tr/Manifest
index 9b25dde62..a4f24a306 100644
--- a/x11-libs/tr/Manifest
+++ b/x11-libs/tr/Manifest
@@ -1 +1 @@
-DIST tr-1.3.tar.gz 23598 RMD160 c562a889b0cd8de19bcf2a1ada3388ef5acca0ee SHA1 811bd872c07450cffec1df5b2b0203613d28393d SHA256 75d2d66935264fe92bf13ed9538d1f167fec165fe28d26163c767ae418d7ae75
+DIST tr-1.3.tar.gz 23598 SHA256 75d2d66935264fe92bf13ed9538d1f167fec165fe28d26163c767ae418d7ae75