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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-03-24 23:49:31 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-03-24 23:49:31 +0100 |
| commit | 8a773e1d1d08a4fed7fdbf65003f7a9b6f67abb4 (patch) | |
| tree | 5cd46a29d71f6d21db70e52e756e7cabfe490d72 | |
| parent | sci-biology/ncbi-tools++: continuing with linking patches (diff) | |
| download | sci-8a773e1d1d08a4fed7fdbf65003f7a9b6f67abb4.tar.gz sci-8a773e1d1d08a4fed7fdbf65003f7a9b6f67abb4.tar.bz2 sci-8a773e1d1d08a4fed7fdbf65003f7a9b6f67abb4.zip | |
sci-biology/ncbi-tools++: add another patch (with an incomplete fix)
Package-Manager: Portage-2.3.3, Repoman-2.3.1
| -rw-r--r-- | sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-srcchk-linking.patch | 13 | ||||
| -rw-r--r-- | sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild | 1 |
2 files changed, 14 insertions, 0 deletions
diff --git a/sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-srcchk-linking.patch b/sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-srcchk-linking.patch new file mode 100644 index 000000000..0724fa2cf --- /dev/null +++ b/sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-srcchk-linking.patch @@ -0,0 +1,13 @@ +--- ncbi_cxx--18_0_0/src/app/srcchk/Makefile.srcchk.app.ori 2017-03-24 04:08:42.723928634 +0100 ++++ ncbi_cxx--18_0_0/src/app/srcchk/Makefile.srcchk.app 2017-03-24 04:10:00.687004260 +0100 +@@ -8,8 +8,8 @@ + + APP = srcchk + SRC = srcchk +-LIB = xobjwrite variation_utils $(OBJREAD_LIBS) xalnmgr xobjutil \ +- gbseq entrez2cli entrez2 tables $(OBJMGR_LIBS) ++LIB = xobjwrite $(XFORMAT_LIBS) variation_utils $(OBJREAD_LIBS) xalnmgr \ ++ xobjutil entrez2cli entrez2 tables $(OBJMGR_LIBS) + + LIBS = $(CMPRS_LIBS) $(NETWORK_LIBS) $(DL_LIBS) $(ORIG_LIBS) + diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild index 3f3f4efc6..f3bf993b0 100644 --- a/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild +++ b/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild @@ -126,6 +126,7 @@ src_prepare() { "${FILESDIR}"/${P}-fix-netstorage_gc-linking.patch "${FILESDIR}"/${P}-fix-speedtest-linking.patch "${FILESDIR}"/${P}-fix-splign-linking.patch + "${FILESDIR}"/${P}-fix-srcchk-linking.patch ) #ncbi-tools++-18.0.0-fix-undefined-lxncbi.patch epatch ${PATCHES[@]} |