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authorJustin Lecher <jlec@gentoo.org>2011-06-24 18:52:39 +0200
committerJustin Lecher <jlec@gentoo.org>2011-06-24 18:52:39 +0200
commitb3fa094aabbbe78bf1e2d152f10399ad885e5df8 (patch)
tree324d313a8e6addf63025a398c76c731600c06572
parentManifest fix (diff)
downloadsci-b3fa094aabbbe78bf1e2d152f10399ad885e5df8.tar.gz
sci-b3fa094aabbbe78bf1e2d152f10399ad885e5df8.tar.bz2
sci-b3fa094aabbbe78bf1e2d152f10399ad885e5df8.zip
Shorten Summary
(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)
-rw-r--r--sci-biology/autoeditor/ChangeLog7
-rw-r--r--sci-biology/autoeditor/Manifest9
-rw-r--r--sci-biology/autoeditor/autoeditor-1.20.ebuild25
3 files changed, 21 insertions, 20 deletions
diff --git a/sci-biology/autoeditor/ChangeLog b/sci-biology/autoeditor/ChangeLog
new file mode 100644
index 000000000..a95258201
--- /dev/null
+++ b/sci-biology/autoeditor/ChangeLog
@@ -0,0 +1,7 @@
+# ChangeLog for sci-biology/autoeditor
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+ 24 Jun 2011; Justin Lecher <jlec@gentoo.org> autoeditor-1.20.ebuild:
+ Shorten Summary
+
diff --git a/sci-biology/autoeditor/Manifest b/sci-biology/autoeditor/Manifest
index b415ad22c..641dc429b 100644
--- a/sci-biology/autoeditor/Manifest
+++ b/sci-biology/autoeditor/Manifest
@@ -5,12 +5,13 @@ AUX Makefile.patch 3051 RMD160 bca80507a7d1b401a96b654e7049a54c8f68bd05 SHA1 453
AUX sample_expected.out 1118 RMD160 38f3a997add481e6ac8b2f981e32aab6113302ce SHA1 5c1afa013888ccdeb4325935a4bc362dfdebe2e1 SHA256 bb51ba6b15a9916c65b0209742ff3dc3a8832c1355f65cbf35738ce88047ce9b
DIST autoEditor-1.20-sample.tar.gz 71953287 RMD160 bfb859a3badec0db85ee31086d2574cd43ebe3a3 SHA1 a36668f1d041552229684c20d9789e7b6301d57e SHA256 f25beb3668ab2b3f2018e5e3b9615995ba5a16b5ce002ff50806287f28f5ef25
DIST autoEditor-1.20.tar.gz 2438903 RMD160 598ac977eb424959fc052b4c857ef4487b7e13f9 SHA1 985b5e880148a904b157295053945f9530718d30 SHA256 c0c399eda52a10deb0e0362b4caf909014768a4d08e90c900392cdf712cefd66
-EBUILD autoeditor-1.20.ebuild 1304 RMD160 1090965e8b9dcfdbf5ed192976dd2ddde4164cdb SHA1 17c7245826480ec3e3ea93b1f373a1077dbdec70 SHA256 a3f44b7e1eb317350ec8e676068601d164e50f997ff0d9919282d4d68abb5711
+EBUILD autoeditor-1.20.ebuild 1134 RMD160 9a60610118475e6bdcfc54676887e1a809fa526f SHA1 297b5566c27274765b52345a6c943d62d750d00f SHA256 8e62b735c19f1ea2a5a1a9fc729fb55f68706f9d6ddf68c6e51eaad02a686345
+MISC ChangeLog 213 RMD160 dad86b527258c7be58b278fd8afcb94f83c4f9a1 SHA1 e37a2303e9c3d7f86446da6094bcb684ff1989bf SHA256 e3e26aff923684c1790497a3cb2c2b04a094d0dba50a2944de58008857873971
MISC metadata.xml 1160 RMD160 1006598866055875c6ad7f39e0634def718002db SHA1 2b13d7786cc0dac0434b14bace3467126904ddc2 SHA256 fb86e548211f36d0f56372b98bd47ff6228e9e81862714937afb1292e9004079
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Version: GnuPG v2.0.17 (GNU/Linux)
-iEYEARECAAYFAk4EwGcACgkQgAnW8HDreRb/5gCfd+Pm4xd/OmVR6a6yYS381ruH
-o3IAn2bIxv0RFuJD4fkKNt1M6YeJESaK
-=j8DQ
+iEYEARECAAYFAk4EwNcACgkQgAnW8HDreRb6RACgkYKEo++8/u1PQglFS2rPcO1y
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diff --git a/sci-biology/autoeditor/autoeditor-1.20.ebuild b/sci-biology/autoeditor/autoeditor-1.20.ebuild
index bbe990805..f39f43dd5 100644
--- a/sci-biology/autoeditor/autoeditor-1.20.ebuild
+++ b/sci-biology/autoeditor/autoeditor-1.20.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
@@ -6,20 +6,21 @@ EAPI=3
inherit eutils
-DESCRIPTION="AutoEditor is a program that can automatically correct discrepancies in a
-multiple alignment by reanalyzing the chromatograms of the discrepant bases."
+DESCRIPTION="Automatic correct of discrepancies in multiple sequence alignments"
HOMEPAGE="http://sourceforge.net/apps/mediawiki/amos/index.php?title=AutoEditor"
-SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/autoEditor/autoEditor-1.20.tar.gz
- test? ( ftp://ftp.cbcb.umd.edu/pub/software/autoEditor/autoEditor-1.20-sample.tar.gz )"
+SRC_URI="
+ ftp://ftp.cbcb.umd.edu/pub/software/autoEditor/autoEditor-1.20.tar.gz
+ test? ( ftp://ftp.cbcb.umd.edu/pub/software/autoEditor/autoEditor-1.20-sample.tar.gz )"
LICENSE="Artistic"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
-DEPEND=">=sci-libs/io_lib-1.8.11
- sys-libs/zlib
- sci-biology/tigr-foundation-libs"
+DEPEND="
+ >=sci-libs/io_lib-1.8.11
+ sci-biology/tigr-foundation-libs
+ sys-libs/zlib"
RDEPEND="${DEPEND}"
S="${WORKDIR}"/autoEditor-1.20
@@ -29,14 +30,6 @@ src_prepare(){
rm -rf TigrFoundation-2.0 || die "Failed to drop TigrFoundation-2.0/"
}
-src_compile(){
- emake || die
-}
-
-src_install(){
- emake install DESTDIR="${D}" || die
-}
-
# TODO:
# * QA Notice: Package has poor programming practices which may compile
# * fine but exhibit random runtime failures.