Cleaned ebuild, 'http://search.cpan.org/CPAN' found in thirdpartymirrors

(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)

6 files changed, 54 insertions, 184 deletions

diff --git a/sci-biology/gbrowse/ChangeLog b/sci-biology/gbrowse/ChangeLog
index 8024f81e1..b66d69a42 100644
--- a/sci-biology/gbrowse/ChangeLog
+++ b/sci-biology/gbrowse/ChangeLog
@@ -1,7 +1,11 @@
-# ChangeLog for sci-biology/generic-genome-browser
-# Copyright 2000-2010 Gentoo Foundation; Distributed under the GPL v2
+# ChangeLog for sci-biology/gbrowse
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
 # $Header: /var/cvsroot/gentoo-x86/sci-biology/generic-genome-browser/ChangeLog,v 1.10 2007/07/29 17:07:38 phreak Exp $
 
+  25 Jun 2011; Justin Lecher <jlec@gentoo.org> -gbrowse-1.70.ebuild,
+  -gbrowse-2.00.ebuild, gbrowse-2.26.ebuild, gbrowse-2.33.ebuild:
+  Cleaned ebuild, 'http://search.cpan.org/CPAN' found in thirdpartymirrors
+
   05 Feb 2010; Andrey Kislyuk <weaver@gentoo.org> ChangeLog:
   Version bump
 
diff --git a/sci-biology/gbrowse/Manifest b/sci-biology/gbrowse/Manifest
index 96f87cdb3..80794da4a 100644
--- a/sci-biology/gbrowse/Manifest
+++ b/sci-biology/gbrowse/Manifest
@@ -1,13 +1,14 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA256
+
 AUX GBrowseInstall.pm-2.26.patch 2647 RMD160 5acd26d95bf0c26edb0f816e840b43ef99a88ea3 SHA1 39362a38cff41097ead8c49de5eaf94d77c59f02 SHA256 1aee7359bc1b036f5d214975a5ea2395a507f04b0ee839ed3a1543a0ab4fb3c6
 AUX GBrowseInstall.pm-2.33.patch 1278 RMD160 96c7f2c66537c6e01cf2619018f608607c0927dc SHA1 a3cb874018d2c7a5acf34381971cc09d83a13f73 SHA256 5a1018f582c2e0ffca034d04ce73f678dd879d90932e4e89ea664c7c113f4b7c
 AUX GBrowseInstall.pm-disable-gbrowse_metadb_config.pl.pm-2.26.patch 1001 RMD160 6784a8d01714be237247d56df13de96681f3aea5 SHA1 55c3eac7eb1e11c766b8d430c7dd36336347ef50 SHA256 a25f49dba6609a25c799d0290713038b608f8aef1a4275eff5f1f12e5225a19a
 AUX gbrowse-slave.default 210 RMD160 77245190ab0d3a543f3103bb6f21864f73ea1cde SHA1 a19d60edd3fdc1f059ed8fa58f7e91fc47ec92dc SHA256 e4e6d68ade29681f442b2e1c7f8abbc7ff3255b3b8db3c59ed6368ba561d7d66
 AUX gbrowse-slave.init.d 2196 RMD160 8b565d1be23c89cbae0f9fd5cd2201f47a564b94 SHA1 738bc8f06486a0e6caa72642f79f9b7dbb356524 SHA256 de511a92757153ee648eb6cd39e3c69c1e30fa2c2ed406f24c08571c72609219
 AUX gbrowse.conf.vhosts.d 740 RMD160 e24f5132e37a84dd0bb9a39e2de99cd11d260844 SHA1 2c44fdcf04bef92eb6210d4e6667b994e5643a13 SHA256 8acd5a067ab3dd42cff0ab7cb0d783b2409ccb872590eba32ea55d4929f65f21
-DIST GBrowse-2.00.tar.gz 3844690 RMD160 f3856ca620d8adc10172d8dfb644dfbbd25cbf88 SHA1 9d78393ca21d2569a975cfff7588cb7fe62d1082 SHA256 62c96ae1c6c1494ff67fbea1fde0d80d5051705c22167a55db317a0d33b1b8ea
 DIST GBrowse-2.26.tar.gz 11937473 RMD160 c2c9d988e3183637b0a97f00e8de1387ad107eab SHA1 3153afc0ef7e6ea8ca6879343028673fdb062501 SHA256 4ac5c0fd87c5ab64b3c52ebb51f51433cb8c6062fd80a56d3de91f24594d3a3f
 DIST GBrowse-2.33.tar.gz 11915644 RMD160 0e2f054b4bcc2748895a856620af7e50f5e15038 SHA1 f31cbe960904b5a2ea4b7eae7a9d78baaf29fce0 SHA256 063114b844776a9500528437fb3dbc60f47a8ac380d910bd6b3148ec7cc0cc4b
-DIST Generic-Genome-Browser-1.70.tar.gz 3331393 RMD160 056f72fc17bdbf803fce7e6bdde406566a80c204 SHA1 7a83abaedc4d2b061e1247972036025a713a845f SHA256 e08ef0d1ffff8186bffd30177808ad3dd7991a99abf3ea6350c8d487ba835486
 DIST README-gff-files 5309 RMD160 8ba184fa8a6b921f925143cf53de06e3da353023 SHA1 ad2d2b3133c73a05ace4a0107ff1a3a4221bc8f8 SHA256 21f4f026b212698c5aac0e82045670f8397ab50fdfe74b938fcbc71a1d36c82a
 DIST Refseq_Genome_TBLASTX.tar.gz 56482234 RMD160 e188d9dfe12bed3fd299be4625f7e658f54bb8c4 SHA1 72ec3de9b9ca0e10c2dd8dcda24f9be74f98cf09 SHA256 7036bdd9aefbf44e384df83f4c1e973c1ab3eac8fe74b37499c4a3f1c55a18af
 DIST fly.fasta.gz 37349852 RMD160 4bedfcc5d0ea3d325f3d3e446713251a8ce34ca3 SHA1 8f2c7a2f24dbab0f27c73009fe51efb8f41d6769 SHA256 892ed03e17edd3469f1ed00cb9967fb905bbac57c1cb7858667381f34a6bfeea
@@ -18,9 +19,14 @@ DIST worm.fasta.gz 30593662 RMD160 674ef3d09cdfaa5d748f18c0e769f0a5ca3d48cf SHA1
 DIST worm.gff.gz 65789458 RMD160 ddced7c965963ce41a10bdecae949731ed305121 SHA1 ccfb0f287e27ff7849b099c81d811f468a7e617c SHA256 afd63c65c3fdb0ba8a1cf455bd4477a2d5d27d5b0e88c6a5a10d156d0567374f
 DIST yeast.fasta.gz 3801757 RMD160 5545054cf6ffa5381c7992141144107076fdf62e SHA1 c36fddc5fd2c79e01292f66644088654304bc438 SHA256 bf51cbced31aa6a30bca43cc72fdb53194fbb403407e2ebb9d70c901ab072e6d
 DIST yeast.gff.gz 249814 RMD160 64538d18de23d930915938bd00ae4a94a52f3960 SHA1 ec753b1ae409e1377f568531a53be8985a7bfa2e SHA256 20c93e6ba9457896a693d13e8fd8fa00d77acbb55aee9b19a31c2b29c4b7e9b1
-EBUILD gbrowse-1.70.ebuild 1670 RMD160 e9bf6980abebabc6ff807ea3c682a3988d0a5f14 SHA1 0413b93216348184e79b3feea36cd68618bed688 SHA256 ecb0b9290e48b82a0d29520d8418593db7baa564bb3731ed7ed808f1b4b5ff3f
-EBUILD gbrowse-2.00.ebuild 1932 RMD160 5a0d15a10c2f6f9e4ac1f60ce048efcd2311cdb4 SHA1 186d5a91fbae9b6894091ac376addb84784d6a03 SHA256 21b035ef921900bc893a4de0fe123b6192860265e0594b73723c24b03dd5a23c
-EBUILD gbrowse-2.26.ebuild 6959 RMD160 a3b966bad08410ea7e619b4cb6497a78836c6094 SHA1 ec109df87df0cfc0d72c35a1c662b2c85f495a10 SHA256 3020b2c5953e7bc02ed1e1e98a8b63bb69feda55101725d019201e748394e5b6
-EBUILD gbrowse-2.33.ebuild 6207 RMD160 20e3780fe421c5b83add7a52d4629a9e169994f0 SHA1 cb5c80a5e6f558f41b71a832e4384501a846271d SHA256 1dfe2823194c4ac30ffd2530d96c04c4a533592fbd1a6931584c0af74422cca3
-MISC ChangeLog 1985 RMD160 9695d7522c6165b842087b67938629377f9cc82b SHA1 3edd2e74f9b26289d95ad7609b838edb3ccb9561 SHA256 76c1d0553f09390397af4354dc653677f25d06828e42e57a60b2f35a869222ac
+EBUILD gbrowse-2.26.ebuild 6919 RMD160 c75670fe70dbb1b2983568e21d9d91b1728eb97f SHA1 f9c778fde5eae6165b3eb51c40744780a15987a9 SHA256 088ad6461ece19a35d40a721f8a6adfb8bed43f076e25b530537a5216c4fbd65
+EBUILD gbrowse-2.33.ebuild 6136 RMD160 9da72299772f44f80f9a653840fa167d04c1d3e5 SHA1 9a65efd853905e653b5a781128e45cc0e00e611a SHA256 db0cc819ad165d509c935e4cef5be3ee1f47d0e0a0a1ecb697ef6290b7259ad5
+MISC ChangeLog 2181 RMD160 c900c81f81e249ceaab92cece31b0a7ce623ff74 SHA1 82f8c139dc4ead52ac81ad2dc1fd5ea1674fb18f SHA256 5be280bf8d600e6dc195554af6cc3d861c891a82713fa1c24ef6a1e8354b39b1
 MISC metadata.xml 572 RMD160 bc941571413238acb3d77e61d49b959737ed4f5a SHA1 0c05303509c0e2dd21b37fc93c936809db49e530 SHA256 89b9964a9404a95dbb622a91735348da8e66d34d7dd7e7f144ed8c0159c43e31
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.17 (GNU/Linux)
+
+iEYEAREIAAYFAk4F8MwACgkQgAnW8HDreRav5ACghzzTjs37/m0yQ0q+7pv4hm/w
+q8IAniINzT54e4XMjgdHP225UPM3zVPE
+=iwop
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/gbrowse/gbrowse-1.70.ebuild b/sci-biology/gbrowse/gbrowse-1.70.ebuild
deleted file mode 100644
index 9bf0f47ce..000000000
--- a/sci-biology/gbrowse/gbrowse-1.70.ebuild
+++ /dev/null
@@ -1,68 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild,v 1.9 2007/07/29 17:07:38 phreak Exp $
-
-EAPI="2"
-
-inherit perl-module webapp
-
-MY_P="Generic-Genome-Browser-${PV}"
-
-DESCRIPTION="The generic genome browser provides a display of genomic annotations on interactive web pages"
-HOMEPAGE="http://gmod.org"
-SRC_URI="mirror://sourceforge/gmod/${MY_P}.tar.gz"
-
-LICENSE="Artistic"
-# webapp ebuilds do not set SLOT
-KEYWORDS="~x86 ~amd64"
-IUSE="-minimal" # lwp moby scf
-
-S="${WORKDIR}/${MY_P}"
-
-# TODO: dev-perl/MOBY, dev-perl/Bio-SCF, dev-perl/libwww-perl, LWP
-DEPEND=">=dev-lang/perl-5.8.8
-	>=sci-biology/bioperl-1.6
-	>=dev-perl/GD-2.07
-	dev-perl/IO-String
-	virtual/perl-Digest-MD5
-	>=dev-perl/CGI-Session-4.03
-	dev-perl/Statistics-Descriptive
-	>=dev-perl/Bio-Graphics-1.97"
-RDEPEND="${DEPEND}
-	>=www-servers/apache-2.0.47
-	>=virtual/perl-CGI-2.56
-	dev-perl/DBI
-	dev-perl/DBD-mysql
-	dev-perl/Class-Base
-	dev-perl/Text-Shellwords
-	!minimal? (
-		dev-perl/XML-Parser
-		dev-perl/XML-Writer
-		dev-perl/XML-Twig
-		dev-perl/XML-DOM
-		dev-perl/GD-SVG
-		dev-perl/Bio-Das
-	)"
-
-src_configure() {
-	webapp_src_preinst
-	perl Makefile.PL \
-		HTDOCS="${D}/${MY_HTDOCSDIR}" \
-		CGIBIN="${D}/${MY_HTDOCSDIR}/cgi-bin" \
-		CONF="${D}/etc" \
-		PREFIX="${D}/usr" \
-		PACKAGE_DIR="${D}" \
-		INSTALLDIRS=vendor \
-		GBROWSE_ROOT=gbrowse \
-		DESTDIR="${ROOT}" \
-		|| die
-}
-
-src_install() {
-	mydoc="Changes README TODO INSTALL"
-	perl-module_src_install
-
-	# TODO: write our own readme
-	webapp_postinst_txt en "${S}/INSTALL"
-	webapp_src_install
-}
diff --git a/sci-biology/gbrowse/gbrowse-2.00.ebuild b/sci-biology/gbrowse/gbrowse-2.00.ebuild
deleted file mode 100644
index cce42a39b..000000000
--- a/sci-biology/gbrowse/gbrowse-2.00.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild,v 1.9 2007/07/29 17:07:38 phreak Exp $
-
-EAPI="2"
-
-inherit perl-module webapp
-
-MY_P="GBrowse-${PV}"
-
-DESCRIPTION="The generic genome browser provides a display of genomic annotations on interactive web pages"
-HOMEPAGE="http://gmod.org"
-SRC_URI="mirror://sourceforge/gmod/${MY_P}.tar.gz"
-
-LICENSE="Artistic"
-# webapp ebuilds do not set SLOT
-KEYWORDS="~x86 ~amd64"
-IUSE="-minimal" # lwp moby scf
-
-S="${WORKDIR}/${MY_P}"
-
-# TODO: dev-perl/MOBY, dev-perl/Bio-SCF, dev-perl/Safe-World (not compatible w/perl-5.10)
-DEPEND=">=dev-lang/perl-5.8.8
-	>=sci-biology/bioperl-1.6
-	>=dev-perl/GD-2.07
-	dev-perl/IO-String
-	virtual/perl-Digest-MD5
-	>=dev-perl/CGI-Session-4.03
-	dev-perl/Statistics-Descriptive
-	>=dev-perl/Bio-Graphics-1.97
-	dev-perl/JSON
-	dev-perl/libwww-perl"
-RDEPEND="${DEPEND}
-	>=www-servers/apache-2.0.47
-	dev-perl/DBI
-	|| ( dev-perl/DBD-Pg dev-perl/DBD-mysql )
-	!minimal? (
-		dev-perl/File-NFSLock
-		dev-perl/FCGI
-		perl-core/Math-BigInt
-		dev-perl/Digest-SHA1
-		dev-perl/Crypt-SSLeay
-		dev-perl/Net-SMTP-SSL
-		dev-perl/GD-SVG
-		dev-perl/Net-OpenID-Consumer
-		virtual/perl-DB_File
-		dev-perl/DB_File-Lock
-	)"
-
-src_prepare() {
-	sed -i 's/return unless -t STDIN/return/' install_util/GBrowseInstall.pm || die
-}
-
-src_configure() {
-	webapp_src_preinst
-	perl Makefile.PL \
-		HTDOCS="${D}/${MY_HTDOCSDIR}" \
-		CGIBIN="${D}/${MY_HTDOCSDIR}/cgi-bin" \
-		CONF="${D}/etc" \
-		PREFIX="${D}/usr" \
-		PACKAGE_DIR="${D}" \
-		INSTALLDIRS=vendor \
-		GBROWSE_ROOT=gbrowse \
-		DESTDIR="${ROOT}" \
-		|| die
-}
-
-src_install() {
-	mydoc="Changes README TODO INSTALL"
-	perl-module_src_install
-
-	# TODO: write our own readme
-	webapp_postinst_txt en "${S}/INSTALL"
-	webapp_src_install
-#	find "${D}" -type f | xargs sed -i "s|${D}||" || die
-}
diff --git a/sci-biology/gbrowse/gbrowse-2.26.ebuild b/sci-biology/gbrowse/gbrowse-2.26.ebuild
index 89000cfd4..363d18d67 100644
--- a/sci-biology/gbrowse/gbrowse-2.26.ebuild
+++ b/sci-biology/gbrowse/gbrowse-2.26.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 EAPI="2"
@@ -7,19 +7,21 @@ inherit perl-module webapp
 
 MY_P="GBrowse-${PV}"
 
-DESCRIPTION="The generic genome browser provides a display of genomic annotations on interactive web pages"
-HOMEPAGE="http://gmod.org"
-SRC_URI="mirror://sourceforge/gmod/${MY_P}.tar.gz
-	test? ( http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/saccharomyces_cerevisiae.gff.bz2
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/Refseq_Genome_TBLASTX.tar.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/README-gff-files
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/human.gff.tar.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.fasta.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.gff.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.fasta.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.gff.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.fasta.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.gff.gz )"
+DESCRIPTION="Display of genomic annotations on interactive web pages"
+HOMEPAGE="http://gmod.org/"
+SRC_URI="
+	mirror://sourceforge/gmod/${MY_P}.tar.gz
+	test? (
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/saccharomyces_cerevisiae.gff.bz2
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/Refseq_Genome_TBLASTX.tar.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/README-gff-files
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/human.gff.tar.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.fasta.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.gff.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.fasta.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.gff.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.fasta.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.gff.gz )"
 
 LICENSE="Artistic"
 # webapp ebuilds do not set SLOT
@@ -30,7 +32,8 @@ S="${WORKDIR}/${MY_P}"
 
 # TODO: dev-perl/MOBY, dev-perl/Bio-SCF, dev-perl/Safe-World (not compatible w/perl-5.10)
 # TODO: make sure www-servers/apache +cgi
-DEPEND=">=dev-lang/perl-5.8.8
+DEPEND="
+	>=dev-lang/perl-5.8.8
 	dev-perl/Capture-Tiny
 	>=sci-biology/bioperl-1.6
 	>=dev-perl/GD-2.07
diff --git a/sci-biology/gbrowse/gbrowse-2.33.ebuild b/sci-biology/gbrowse/gbrowse-2.33.ebuild
index e2bcfc3be..9cc3ce479 100644
--- a/sci-biology/gbrowse/gbrowse-2.33.ebuild
+++ b/sci-biology/gbrowse/gbrowse-2.33.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 EAPI="2"
@@ -7,21 +7,23 @@ inherit perl-module webapp
 
 MY_P="GBrowse-${PV}"
 
-DESCRIPTION="The generic genome browser provides a display of genomic annotations on interactive web pages"
-HOMEPAGE="http://gmod.org"
+DESCRIPTION="Display of genomic annotations on interactive web pages"
+HOMEPAGE="http://gmod.org/"
 # mirror://sourceforge/gmod/${MY_P}.tar.gz
-# http://search.cpan.org/CPAN/authors/id/L/LD/LDS/GBrowse-2.33.tar.gz
-SRC_URI="http://search.cpan.org/CPAN/authors/id/L/LD/LDS/${MY_P}.tar.gz
-	test? ( http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/saccharomyces_cerevisiae.gff.bz2
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/Refseq_Genome_TBLASTX.tar.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/README-gff-files
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/human.gff.tar.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.fasta.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.gff.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.fasta.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.gff.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.fasta.gz
-			http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.gff.gz )"
+# mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.33.tar.gz
+SRC_URI="
+	mirror://cpan/authors/id/L/LD/LDS/${MY_P}.tar.gz
+	test? (
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/saccharomyces_cerevisiae.gff.bz2
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/Refseq_Genome_TBLASTX.tar.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/README-gff-files
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/human.gff.tar.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.fasta.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/yeast.gff.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.fasta.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/worm.gff.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.fasta.gz
+		http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/Sample%20Data%20Files/fly.gff.gz )"
 
 LICENSE="Artistic"
 # webapp ebuilds do not set SLOT
@@ -54,7 +56,6 @@ DEPEND="
 #    *  Bio::DB::Sam is not installed
 #    *  DBD::Pg is not installed
 
-
 RDEPEND="${DEPEND}
 	>=www-servers/apache-2.0.47
 	www-apache/mod_fastcgi