version bump of refmac

A problem related with TLS has been fixed. The problem was that not in all cycle TLS contributions were added to B values and that could make refinement unstable.

and guile-www added
bug 271283

8 files changed, 78 insertions, 4 deletions

diff --git a/dev-scheme/guile-www/ChangeLog b/dev-scheme/guile-www/ChangeLog
new file mode 100644
index 000000000..64c6760bc
--- /dev/null
+++ b/dev-scheme/guile-www/ChangeLog
@@ -0,0 +1,32 @@
+# ChangeLog for dev-scheme/guile-www
+# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/dev-scheme/guile-www/ChangeLog,v 1.5 2008/07/12 12:24:56 hkbst Exp $
+
+*guile-www-2.24 (26 May 2009)
+
+  26 May 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
+  +guile-www-2.24.ebuild, +metadata.xml:
+  version bump
+
+*guile-www-2.23 (12 Jul 2008)
+
+  12 Jul 2008; Marijn Schouten <hkBst@gentoo.org> +guile-www-2.23.ebuild:
+  bump
+
+  10 Jan 2007; Piotr Jaroszyński <peper@gentoo.org> guile-www-2.15.ebuild:
+  Dependency update: dev-util/guile -> dev-scheme/guile.
+
+  01 Oct 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+  Transfer to sci-chemistry herd from sci.
+
+  26 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+  guile-www-2.15.ebuild:
+  Stable on x86/ppc.
+
+*guile-www-2.15 (16 Jun 2006)
+
+  16 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+  +guile-www-2.15.ebuild:
+  Add Guile code for HTTP, URL and CGI programming, needed for
+  sci-chemistry/coot.
+
diff --git a/dev-scheme/guile-www/Manifest b/dev-scheme/guile-www/Manifest
new file mode 100644
index 000000000..6e8f82830
--- /dev/null
+++ b/dev-scheme/guile-www/Manifest
@@ -0,0 +1,6 @@
+DIST guile-www-2.15.tar.gz 214672 RMD160 21d8e516ea0c515e2f6e00d9f5840973b934bc06 SHA1 b05a65ff70122ffa71c5cf4c46b2602719f892dd SHA256 fc847371dd943d3b136d57f438ec2cfa5f31c6980df7573c851fa280d3c4cfc8
+DIST guile-www-2.23.tar.gz 273202 RMD160 e2455de3837815b5616ea85fd2988d6b4dbe927f SHA1 f69f968e3a5aae21aa896a0f46e3e342baea5ba4 SHA256 8593b6a9fe9d8ee08d154b9825d188ad57ca26c71c36d1fb7a855154bdbef3fa
+EBUILD guile-www-2.15.ebuild 608 RMD160 c9943993427be4aa0145b3d8e2c55690748f55a0 SHA1 9ee12a2e5b1c25d1a05cffdb52c71eb2dfaa1bde SHA256 89f9d12edbf0803ac383d8bcfae430041b0591ff720387af0a30325bd06249ca
+EBUILD guile-www-2.23.ebuild 601 RMD160 cb31e17a7d5119eeee8042c5b42a36ec2107d989 SHA1 094101d6e973929cd96d37866c311dec36de80b1 SHA256 a290399802f93b9b5591f708e8bef52532516f244e30974cc4866a3102cc1990
+MISC ChangeLog 887 RMD160 7063eeecb5a85878b5656d1646eec251d4a5531b SHA1 3a77adf73d221c91b83aa25e9355ef253f3cd4b9 SHA256 27276647257f559ff49deceb3c168283eaa63aeb65cbf086c31b07ef2365c991
+MISC metadata.xml 258 RMD160 f28967430de9ad28d9e5cc6666d3e507117879ee SHA1 c594a70de8bf8aa9f5766ff8bfd5135e7536d249 SHA256 b6a5e5a499c6846188743b9220fc3c518467023a1aa9dc883d29bd92fb495d75
diff --git a/dev-scheme/guile-www/guile-www-2.24.ebuild b/dev-scheme/guile-www/guile-www-2.24.ebuild
new file mode 100644
index 000000000..034f1b19a
--- /dev/null
+++ b/dev-scheme/guile-www/guile-www-2.24.ebuild
@@ -0,0 +1,17 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/dev-scheme/guile-www/guile-www-2.23.ebuild,v 1.1 2008/07/12 12:24:56 hkbst Exp $
+
+DESCRIPTION="Guile Scheme modules to facilitate HTTP, URL and CGI programming"
+HOMEPAGE="http://www.gnuvola.org/software/guile-www/"
+SRC_URI="http://www.gnuvola.org/software/guile-www/${P}.tar.gz"
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~amd64 ~ppc ~x86"
+IUSE=""
+RDEPEND="dev-scheme/guile"
+DEPEND="${RDEPEND}"
+
+src_install() {
+	make DESTDIR="${D}" install || die "install failed"
+}
diff --git a/dev-scheme/guile-www/metadata.xml b/dev-scheme/guile-www/metadata.xml
new file mode 100644
index 000000000..797b6c062
--- /dev/null
+++ b/dev-scheme/guile-www/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<herd>sci-chemistry</herd>
+<maintainer>
+<email>spyderous@gentoo.org</email>
+<name>Donnie Berkholz</name>
+</maintainer>
+</pkgmetadata>
diff --git a/sci-chemistry/refmac/ChangeLog b/sci-chemistry/refmac/ChangeLog
index cd2423492..d786dfe83 100644
--- a/sci-chemistry/refmac/ChangeLog
+++ b/sci-chemistry/refmac/ChangeLog
@@ -2,6 +2,16 @@
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*refmac-5.5.0094 (26 May 2009)
+
+  26 May 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
+  -files/5.5.0093-allow-dynamic-linking.patch, -refmac-5.5.0093.ebuild,
+  +files/5.5.0094-allow-dynamic-linking.patch, +refmac-5.5.0094.ebuild:
+  A problem related with TLS has been fixed. The problem was that not in all
+  cycle TLS contributions were added to B values and that could make
+  refinement unstable.
+
+
 *refmac-5.5.0093 (22 May 2009)
 
   22 May 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
diff --git a/sci-chemistry/refmac/Manifest b/sci-chemistry/refmac/Manifest
index f696d0e5f..e5923c11c 100644
--- a/sci-chemistry/refmac/Manifest
+++ b/sci-chemistry/refmac/Manifest
@@ -1,14 +1,14 @@
 AUX 5.5.0092-allow-dynamic-linking.patch 2025 RMD160 b4324061b5468aedce6d37fc17049711231e677d SHA1 d04e47048302bd7df59d470a9657289871f42721 SHA256 410ffe2a7dee8dd30376355298319f7cc413fa2ff0765a1f77f02cb975e4a23a
-AUX 5.5.0093-allow-dynamic-linking.patch 2025 RMD160 b4324061b5468aedce6d37fc17049711231e677d SHA1 d04e47048302bd7df59d470a9657289871f42721 SHA256 410ffe2a7dee8dd30376355298319f7cc413fa2ff0765a1f77f02cb975e4a23a
+AUX 5.5.0094-allow-dynamic-linking.patch 2025 RMD160 b4324061b5468aedce6d37fc17049711231e677d SHA1 d04e47048302bd7df59d470a9657289871f42721 SHA256 410ffe2a7dee8dd30376355298319f7cc413fa2ff0765a1f77f02cb975e4a23a
 AUX 5.6.0031-allow-dynamic-linking.patch 1178 RMD160 8222b326a7f2d80d1d6202f8761c9bd4bb3ac797 SHA1 07484f5c65e35823963a712ac378bc64dafc0e5d SHA256 24e40c994ce76668e62e2374e41ece1d89fb4c59ab185d3c6eb9c3e76d4610fb
 AUX 5.6.0033-allow-dynamic-linking.patch 1178 RMD160 8222b326a7f2d80d1d6202f8761c9bd4bb3ac797 SHA1 07484f5c65e35823963a712ac378bc64dafc0e5d SHA256 24e40c994ce76668e62e2374e41ece1d89fb4c59ab185d3c6eb9c3e76d4610fb
 DIST refmac5.6_source_v5.6.0033.tar.gz 1333417 RMD160 0f6072d573beb0f03df33e988d9b101b77c52d6f SHA1 5cdaa083aae142d3aba8e764c8e7c8397e3b5c77 SHA256 591ce4d141fda1086bf5797b3a134a89d2618eaa6ff3a4c9ffa10de331d6265e
 DIST refmac_5.5.0092.tar.gz 1296668 RMD160 1f48cb3d2cfc3b7e91bcde5caa212813d63b20be SHA1 35497b7986ad4861518077f5e06937851cbeb4ff SHA256 6aabf0af882605a2dc73b29f42e8dee34be0888f667befb7342576b2df84623d
-DIST refmac_5.5.0093.tar.gz 1296667 RMD160 90af8a0af9f5e28597b6005fdfa84c909371aa94 SHA1 ab562cc2ff858378ad35090b9619aaa109b40ab2 SHA256 79ab195b9244dc30953febad24a10d0687067a1d10e3224fafce83be928026f8
+DIST refmac_5.5.0094.tar.gz 1296698 RMD160 fc07b10be0c00627b4c4174f44e0d7a7ae0bf86c SHA1 e4f69497c174e9e60d8b7f57cf456f5aa142c906 SHA256 afb9c971d9c1721a56cd81bdae265d6a3de1860db6615109d3de6624cc9ff8d0
 DIST refmac_source_v5.6.0031.tar.gz 1331481 RMD160 ae37017abeb8ba01d8a3318e78987780e3ce5070 SHA1 6f1a6a35bf9e9efba6a60861f69b53aa728c4392 SHA256 80a6e441635df07e06a80a2bbee1bc12781c7d57dd107b83de4baebfd3f99cf4
 EBUILD refmac-5.5.0092.ebuild 1045 RMD160 ab5645566baf7d0dbac1522258377130e837d2a7 SHA1 6dacfd7d27edf0121344e255f5bda678b5701f69 SHA256 dbb5111b9ede779c6345c44400510a0d12f655d89eb0208f9e2ddc2304315c70
-EBUILD refmac-5.5.0093.ebuild 1045 RMD160 ab5645566baf7d0dbac1522258377130e837d2a7 SHA1 6dacfd7d27edf0121344e255f5bda678b5701f69 SHA256 dbb5111b9ede779c6345c44400510a0d12f655d89eb0208f9e2ddc2304315c70
+EBUILD refmac-5.5.0094.ebuild 1045 RMD160 ab5645566baf7d0dbac1522258377130e837d2a7 SHA1 6dacfd7d27edf0121344e255f5bda678b5701f69 SHA256 dbb5111b9ede779c6345c44400510a0d12f655d89eb0208f9e2ddc2304315c70
 EBUILD refmac-5.6.0031.ebuild 1062 RMD160 88e1065c6899b09e943bf2b3365d36bda4fd3bc0 SHA1 c811d1771f2384347382ffb532442f2d5a1b264f SHA256 2379b4b9e19f0079fe0350f3864c7bb9a1618a48e0d6c54c0497b20f1848f61b
 EBUILD refmac-5.6.0033.ebuild 1200 RMD160 cf0754afc5ea07df2fed0baf7599dfcd32e43ada SHA1 7811acc5a91e73b0ee85a340e489f1bc95eecefb SHA256 ee98605ab90acd94b7f3e669ef41e9e4fff309cacd9cb188ddc2c7cfa360aa17
-MISC ChangeLog 2584 RMD160 cd19a66f42f6453582bf66e5a99da315cc7fe220 SHA1 78a40747e4f18471914469b899f27f2070edb887 SHA256 63149d11693614a7787ae24b903e44871fa6dd1dc6bff70fd8edbcd37cf45bb5
+MISC ChangeLog 2988 RMD160 8a8b1ecf1edeafc2d9b327ff7c51c6cf80b034e8 SHA1 5c762cb946bbd6c999a23438b61dad5a13001d62 SHA256 99df459585fbede011cdc8afd15cbf54729de33d450d63dd2883691172a0a493
 MISC metadata.xml 314 RMD160 d8922635160b6047732051715291e8553b513bba SHA1 b53fc6fb6cf908093794b876e729606c00351937 SHA256 50a519ddbcef4ad4f76175df36849a076d20adbb6340fdba292175b70c0d9719
diff --git a/sci-chemistry/refmac/files/5.5.0093-allow-dynamic-linking.patch b/sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch
index 415ba9d08..415ba9d08 100644
--- a/sci-chemistry/refmac/files/5.5.0093-allow-dynamic-linking.patch
+++ b/sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch
diff --git a/sci-chemistry/refmac/refmac-5.5.0093.ebuild b/sci-chemistry/refmac/refmac-5.5.0094.ebuild
index d53653bdc..d53653bdc 100644
--- a/sci-chemistry/refmac/refmac-5.5.0093.ebuild
+++ b/sci-chemistry/refmac/refmac-5.5.0094.ebuild