aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorMarius Brehler <marbre@linux.sungazer.de>2015-09-03 11:23:41 +0200
committerMarius Brehler <marbre@linux.sungazer.de>2015-09-03 11:23:41 +0200
commitf593357ab647606d698ca3318101c04d03b29598 (patch)
tree1c4d539e96dc4e45bdf10673f2502e2c40c43698 /patches/ccp4
parentdev-python/jupyter_core: Fix tests (issue #479) (diff)
downloadsci-f593357ab647606d698ca3318101c04d03b29598.tar.gz
sci-f593357ab647606d698ca3318101c04d03b29598.tar.bz2
sci-f593357ab647606d698ca3318101c04d03b29598.zip
Drop obsolete patches
Diffstat (limited to 'patches/ccp4')
-rw-r--r--patches/ccp4/6.1.2/fix-baubles.patch22
-rw-r--r--patches/ccp4/6.1.2/rename-rapper.patch12
-rw-r--r--patches/ccp4/6.1.2/rename-superpose.patch12
-rw-r--r--patches/ccp4/6.1.2/rename-truncate.patch22
4 files changed, 0 insertions, 68 deletions
diff --git a/patches/ccp4/6.1.2/fix-baubles.patch b/patches/ccp4/6.1.2/fix-baubles.patch
deleted file mode 100644
index 2c5f659b8..000000000
--- a/patches/ccp4/6.1.2/fix-baubles.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- ccp4i/etc/configure.def.dist 2009-01-09 16:45:08.000000000 +0100
-+++ ccp4i/etc/configure.def.dist.new 2009-07-07 23:17:26.000000000 +0200
-@@ -53,8 +53,8 @@
- RUN_IMOSFLM _text "ccp4iwish [file join [GetEnvPath CCP4I_TOP] imosflm imosflm.tcl] project [GetCurrentProjectDir [GetCurrentProject]]"
- RUN_CCP4MG _text "ccp4mg"
- RUN_COOT _text "coot"
--RUN_BAUBLES _text "python [file join [GetEnvPath CCP4] share smartie baubles.py]"
--RUN_DBVIEWER _text "wish [file join [GetEnvPath CCP4] share dbccp4i application viewer.tcl]"
-+RUN_BAUBLES _text "python [file join [GetEnvPath CCP4] share ccp4 smartie baubles.py]"
-+RUN_DBVIEWER _text "wish [file join [GetEnvPath DBCCP4I_TOP] application viewer.tcl]"
- ENABLE_BUBBLE_HELP _logical 1
- DISABLE_TASKS _logical 1
- CCP4_SETUP_COMMAND _text setup_ccp4
-@@ -62,7 +62,7 @@
- BLT_LIBRARY _text ""
- MENU_LENGTH _positiveint 25
- HYPERTEXT_VIEWER _text firefox
--START_NETSCAPE _text netscape
-+START_NETSCAPE _text firefox
- O_MAPMAN _text mapman
- MAPMAN_MAXSIZE _positiveint 4194304
- QUANTA_MBKALL _text mbkall
diff --git a/patches/ccp4/6.1.2/rename-rapper.patch b/patches/ccp4/6.1.2/rename-rapper.patch
deleted file mode 100644
index a50ae6dbd..000000000
--- a/patches/ccp4/6.1.2/rename-rapper.patch
+++ /dev/null
@@ -1,12 +0,0 @@
---- ccp4i/scripts/rapper.script 2009-02-03 11:49:50.000000000 +0100
-+++ ccp4i/scripts/rapper.script.new 2009-03-12 23:34:47.000000000 +0100
-@@ -17,7 +17,7 @@
-
- #set up command line
-
--set cmd "[BinPath rapper]"
-+set cmd "[BinPath rappermc]"
-
- set rapperdatadir [FileJoin [GetEnvPath CCP4] share rapper]
- set paramsfile [FileJoin [GetEnvPath CCP4] share rapper params.xml]
-
diff --git a/patches/ccp4/6.1.2/rename-superpose.patch b/patches/ccp4/6.1.2/rename-superpose.patch
deleted file mode 100644
index 90480eb8e..000000000
--- a/patches/ccp4/6.1.2/rename-superpose.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -arNu ccp4-6.1.1/ccp4i/scripts/superpose.script ccp4-6.1.1.new/ccp4i/scripts/superpose.script
---- ccp4-6.1.1/ccp4i/scripts/superpose.script 2006-07-26 16:22:49.000000000 +0200
-+++ ccp4-6.1.1.new/ccp4i/scripts/superpose.script 2009-07-05 22:11:59.000000000 +0200
-@@ -21,7 +21,7 @@
-
- if { [regexp SSM $SUPERPOSE_MODE ] } {
-
-- set cmd "[BinPath superpose] \"$XYZIN2\" -s $SSM_MOVING \"$XYZIN1\" -s $SSM_FIXED \"$XYZOUT_LOCAL\""
-+ set cmd "[BinPath superpose-ccp4] \"$XYZIN2\" -s $SSM_MOVING \"$XYZIN1\" -s $SSM_FIXED \"$XYZOUT_LOCAL\""
- set status [Execute $cmd "" program_status report ]
-
- } elseif { [regexp TOP $SUPERPOSE_MODE ] } {
diff --git a/patches/ccp4/6.1.2/rename-truncate.patch b/patches/ccp4/6.1.2/rename-truncate.patch
deleted file mode 100644
index 26f1cda3e..000000000
--- a/patches/ccp4/6.1.2/rename-truncate.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- ./ccp4i/templates/truncate.com.orig 2009-03-02 23:31:04.000000000 -0800
-+++ ./ccp4i/templates/truncate.com 2009-03-02 23:31:08.000000000 -0800
-@@ -11,7 +11,7 @@
- $SYMMETRY symmetry $SPACE_GROUP
- $CELL cell $CELL_1 $CELL_2 $CELL_3 $CELL_4 $CELL_5 $CELL_6
-
--1 truncate
-+1 ftruncate
- - { [StringSame $APPLY_TRUNCATE "WILSON" ] } YES | NO
- {[IfSet $ANOMALOUS]} anomalous
- - $ANOMALOUS YES | NO
---- ./ccp4i/scripts/truncate.script.orig 2009-03-02 23:39:04.000000000 -0800
-+++ ./ccp4i/scripts/truncate.script 2009-03-02 23:39:41.000000000 -0800
-@@ -45,7 +45,7 @@
-
- CreateComScript truncate truncate_script
-
-- set cmd "[BinPath truncate] HKLIN \"$HKLIN\""
-+ set cmd "[BinPath ftruncate] HKLIN \"$HKLIN\""
- if { ![StringSame $INPUT_DATA AMPLITUDES] } {
- append cmd " HKLOUT \"$HKL_TRUNCATE\""
- }