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| author |   Andrei Zavada <johnhommer@gmail.com> | 2015-02-18 03:10:53 +0200 |
|---|---|---|
| committer | Andrei Zavada <johnhommer@gmail.com> | 2015-02-18 03:10:53 +0200 |
| commit | 793710fde6c3d193a249b5ab6a943a1c596b6abe (patch) | |
| tree | d95583bf0c82e0d1f7de0827b6a41e132048cd7c /sci-biology/cnrun/metadata.xml | |
| parent | use tabs, sort RDEPEND items (diff) | |
| download | sci-793710fde6c3d193a249b5ab6a943a1c596b6abe.tar.gz sci-793710fde6c3d193a249b5ab6a943a1c596b6abe.tar.bz2 sci-793710fde6c3d193a249b5ab6a943a1c596b6abe.zip | |
initial ebuild for sci-biology/cnrun
CNrun is a neuronal network simulator, with these features:
* a conductance- and rate-based Hodgkin-Huxley neurons, a Rall and
Alpha-Beta synapses;
* a 6-5 Runge-Kutta integration method: slow but precise, adjustable;
* Poisson, Van der Pol, Colpitts oscillators and interface for
external stimulation sources;
* NeuroML network topology import/export;
* logging state variables, spikes;
* implemented as a Lua module, for scripting model behaviour (e.g.,
to enable plastic processes regulated by model state);
* interaction (topology push/pull, async connections) with other
cnrun models running elsewhere on a network, with interactions
(planned).
Diffstat (limited to 'sci-biology/cnrun/metadata.xml')
| -rw-r--r-- | sci-biology/cnrun/metadata.xml | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/sci-biology/cnrun/metadata.xml b/sci-biology/cnrun/metadata.xml new file mode 100644 index 000000000..48dcd976b --- /dev/null +++ b/sci-biology/cnrun/metadata.xml @@ -0,0 +1,29 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>johnhommer@gmail.com</email> + <name>Andrei Zavada</name> + </maintainer> + <longdescription> + CNrun is a neuronal network simulator, with these features: + + * a conductance- and rate-based Hodgkin-Huxley neurons, a Rall and + Alpha-Beta synapses; + * a 6-5 Runge-Kutta integration method: slow but precise, adjustable; + * Poisson, Van der Pol, Colpitts oscillators and interface for + external stimulation sources; + * NeuroML network topology import/export; + * logging state variables, spikes; + * implemented as a Lua module, for scripting model behaviour (e.g., + to enable plastic processes regulated by model state); + * interaction (topology push/pull, async connections) with other + cnrun models running elsewhere on a network, with interactions + (planned). + + Note that there is no `cnrun' executable, which existed in cnrun-1.*. + Instead, you write a script for your simulation in Lua, and execute + it as detailed in /usr/share/lua-cnrun/examples/example1.lua. + </longdescription> +</pkgmetadata> |