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authorFran├žois Bissey <frp.bissey@gmail.com>2018-04-23 20:51:16 +1200
committerMartin Mokrejs <mmokrejs@fold.natur.cuni.cz>2018-05-07 23:44:57 +0200
commitf373141b6dd59db5eaf1bce4104e5ba6085958ac (patch)
tree91f81c87e9cc3439e07c5503e2368580ffd3289e /sci-biology/kat/files/kat-2.4.1-make_no_pykat.patch
parentsci-libs/tensorflow: Move our flags to bazel-get-flags() (diff)
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sci-biology/kat: various fixes for issue #867
many thanks to @kiwifb and @maplesond for on fixing the package and ebuild ax_check_zlib is in use. A hint for zlib location has to be provided otherwise system zlib will be used on prefix. make sure zlib is a dependency. develop branch has switched to proper library detection. fixing rpath. enabling python support (but broken right now). make sure a suitable python3 is setup at configure time bump to 2.4.2 fix typo in /DEPPEND/DEPEND/, cleanup comments Closes: https://github.com/gentoo/sci/issues/867 Closes: https://github.com/gentoo/sci/pull/868 Package-Manager: Portage-2.3.31, Repoman-2.3.9
Diffstat (limited to 'sci-biology/kat/files/kat-2.4.1-make_no_pykat.patch')
-rw-r--r--sci-biology/kat/files/kat-2.4.1-make_no_pykat.patch15
1 files changed, 15 insertions, 0 deletions
diff --git a/sci-biology/kat/files/kat-2.4.1-make_no_pykat.patch b/sci-biology/kat/files/kat-2.4.1-make_no_pykat.patch
new file mode 100644
index 000000000..7ba08010c
--- /dev/null
+++ b/sci-biology/kat/files/kat-2.4.1-make_no_pykat.patch
@@ -0,0 +1,15 @@
+diff --git a/Makefile.am b/Makefile.am
+index 5f0f42e..4da6c05 100644
+--- a/Makefile.am
++++ b/Makefile.am
+@@ -21,10 +21,6 @@ dist_noinst_SCRIPTS = autogen.sh antigen.sh build_boost.sh
+ # SRC DIRS
+ make_dirs=deps/jellyfish-2.2.0 deps/seqan-library-2.0.0 lib src tests
+
+-if MAKE_PYKAT
+- make_dirs += scripts
+-endif
+-
+ if MAKE_DOCS
+ make_dirs += doc
+ endif