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authorMartin Mokrejs <mmokrejs@fold.natur.cuni.cz>2018-04-22 23:17:51 +0200
committerMartin Mokrejs <mmokrejs@fold.natur.cuni.cz>2018-04-22 23:17:51 +0200
commit65304d57d4c51cdf0c55740ee37f30e800090a16 (patch)
treec941b486f15a964b044c9ce564db453cc8dead58 /sci-biology/kat
parentsci-biology/BlastToSam: move the -9999 ebuild to 1.1 version (diff)
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sci-biology/kat: add missing DEPENDency
Package-Manager: Portage-2.3.31, Repoman-2.3.9
Diffstat (limited to 'sci-biology/kat')
-rw-r--r--sci-biology/kat/kat-2.4.1.ebuild5
-rw-r--r--sci-biology/kat/kat-8888.ebuild2
-rw-r--r--sci-biology/kat/kat-9999.ebuild5
3 files changed, 7 insertions, 5 deletions
diff --git a/sci-biology/kat/kat-2.4.1.ebuild b/sci-biology/kat/kat-2.4.1.ebuild
index 29f11c9f6..86dd7b5a8 100644
--- a/sci-biology/kat/kat-2.4.1.ebuild
+++ b/sci-biology/kat/kat-2.4.1.ebuild
@@ -15,7 +15,7 @@ SRC_URI="https://github.com/TGAC/KAT/archive/Release-${PV}.tar.gz -> ${P}.tar.gz
LICENSE="GPL-3+"
SLOT="0"
KEYWORDS=""
-IUSE="cpu_flags_x86_sse doc"
+IUSE="cpu_flags_x86_sse doc tex"
DEPEND="
>=dev-libs/boost-1.52[${PYTHON_USEDEP}]
@@ -23,7 +23,8 @@ DEPEND="
dev-python/matplotlib[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
sci-libs/scipy[${PYTHON_USEDEP}]
- doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )"
+ doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
+ tex? ( dev-tex/latexmk dev-texlive/texlive-formatsextra )"
RDEPEND="${DEPEND}"
# contains bundled *modified* version of jellyfish-2.2 which should install under different filenames
# contains embedded sci-biology/seqan
diff --git a/sci-biology/kat/kat-8888.ebuild b/sci-biology/kat/kat-8888.ebuild
index a8a776c29..07c3f57d2 100644
--- a/sci-biology/kat/kat-8888.ebuild
+++ b/sci-biology/kat/kat-8888.ebuild
@@ -24,7 +24,7 @@ DEPEND="
dev-python/numpy[${PYTHON_USEDEP}]
sci-libs/scipy[${PYTHON_USEDEP}]
doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
- tex? ( dev-tex/latexmk )"
+ tex? ( dev-tex/latexmk dev-texlive/texlive-formatsextra )"
RDEPEND="${DEPEND}"
# contains bundled a *modified* version of jellyfish-2.2.0 (libkat_jellyfish.{a,so})
# contains embedded sci-biology/seqan
diff --git a/sci-biology/kat/kat-9999.ebuild b/sci-biology/kat/kat-9999.ebuild
index 8fe79a34b..403a0df59 100644
--- a/sci-biology/kat/kat-9999.ebuild
+++ b/sci-biology/kat/kat-9999.ebuild
@@ -15,7 +15,7 @@ EGIT_REPO_URI="https://github.com/TGAC/KAT.git"
LICENSE="GPL-3+"
SLOT="0"
KEYWORDS=""
-IUSE="cpu_flags_x86_sse doc"
+IUSE="cpu_flags_x86_sse doc tex"
DEPEND="
>=dev-libs/boost-1.52
@@ -23,7 +23,8 @@ DEPEND="
dev-python/matplotlib
dev-python/numpy
sci-libs/scipy
- doc? ( dev-python/sphinx )"
+ doc? ( dev-python/sphinx )
+ tex? ( dev-tex/latexmk dev-texlive/texlive-formatsextra )"
RDEPEND="${DEPEND}"
# contains bundled a *modified* version of jellyfish-2.2.0 (libkat_jellyfish.{a,so})
# contains embedded sci-biology/seqan