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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2013-09-14 10:18:58 +0200 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2013-09-14 10:18:58 +0200 |
| commit | 2159e8e3583f47d97226803cd59fa3e715979c01 (patch) | |
| tree | 7b1369a3b70ed07a819774411e07424f94cc9944 /sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild | |
| parent | Fix URL to point to a public SVN repository (diff) | |
| download | sci-2159e8e3583f47d97226803cd59fa3e715979c01.tar.gz sci-2159e8e3583f47d97226803cd59fa3e715979c01.tar.bz2 sci-2159e8e3583f47d97226803cd59fa3e715979c01.zip | |
Add upstream ncbi-tools++-9.0.0-remove-LZO-definition-upstream.patch with line offset changes.
Diffstat (limited to 'sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild')
| -rw-r--r-- | sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild | 7 |
1 files changed, 3 insertions, 4 deletions
diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild index 24f92be32..1a34f3554 100644 --- a/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild +++ b/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild @@ -24,7 +24,7 @@ IUSE=" debug static-libs static threads pch test wxwidgets odbc berkdb boost bzip2 cppunit curl expat fastcgi fltk freetype ftds gif - glut gnutls hdf5 icu jpeg lzo mesa mysql muparser opengl pcre png python + glut gnutls hdf5 icu jpeg mesa mysql muparser opengl pcre png python sablotron sqlite sqlite3 ssl tiff xerces xalan xml xpm xslt X" #KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" KEYWORDS="" @@ -38,7 +38,7 @@ DEPEND=" sqlite? ( dev-db/sqlite ) sqlite3? ( dev-db/sqlite:3 ) mysql? ( virtual/mysql ) - gnutls? ( net-libs/gnutls[lzo] ) + gnutls? ( net-libs/gnutls ) ssl? ( dev-libs/openssl ) fltk? ( x11-libs/fltk ) opengl? ( virtual/opengl ) @@ -64,7 +64,6 @@ DEPEND=" png? ( media-libs/libpng ) tiff? ( media-libs/tiff ) xpm? ( x11-libs/libXpm ) - dev-libs/lzo app-arch/bzip2 dev-libs/libpcre" # USE flags which should be added somehow: wxWindows wxWidgets SP ORBacus ODBC OEChem sge @@ -108,6 +107,7 @@ src_prepare() { "${FILESDIR}"/${P}-fix-creaders-linking.patch "${FILESDIR}"/${P}-fix-svn-URL-upstream.patch "${FILESDIR}"/${P}-fix-undef-reference-to-GenBankReaders_Register_Id1.patch + "${FILESDIR}"/${P}-remove-LZO-definition-upstream.patch ) epatch ${PATCHES[@]} @@ -215,7 +215,6 @@ src_configure() { $(use_with prefix runpath "${EPREFIX}/usr/$(get_libdir)/ncbi_cxx") $(use_with test check) $(use_with pch) - $(use_with lzo lzo "${EPREFIX}/usr") $(use_with pcre pcre "${EPREFIX}/usr") $(use_with gnutls gnutls "${EPREFIX}/usr") $(use_with ssl openssl "${EPREFIX}/usr") |