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authorMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2014-03-24 01:48:03 +0100
committerMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2014-03-24 01:48:03 +0100
commitc5cfa53b62a55cef63b6f7da5e14d75584e64b11 (patch)
tree57911843ca24667f745a2a6a7de565bd4db6c4a9 /sci-biology/ngsview
parentsci-biology/scythe: new package, bundled Makefile forces -O3, wrong version n... (diff)
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sci-biology/ngsview: new package skeleton, needs qt team help
Diffstat (limited to 'sci-biology/ngsview')
-rw-r--r--sci-biology/ngsview/ChangeLog10
-rw-r--r--sci-biology/ngsview/Manifest1
-rw-r--r--sci-biology/ngsview/metadata.xml9
-rw-r--r--sci-biology/ngsview/ngsview-0.91.ebuild27
4 files changed, 47 insertions, 0 deletions
diff --git a/sci-biology/ngsview/ChangeLog b/sci-biology/ngsview/ChangeLog
new file mode 100644
index 000000000..4e49397b6
--- /dev/null
+++ b/sci-biology/ngsview/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/ngsview
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*ngsview-0.91 (24 Mar 2014)
+
+ 24 Mar 2014; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+ +ngsview-0.91.ebuild, +metadata.xml:
+ needs qt team help
+
diff --git a/sci-biology/ngsview/Manifest b/sci-biology/ngsview/Manifest
new file mode 100644
index 000000000..08fe025d2
--- /dev/null
+++ b/sci-biology/ngsview/Manifest
@@ -0,0 +1 @@
+DIST ngsview-0.91.tar.gz 81473082 SHA256 bac0035efd21f7fc842ca918dbf4be629c0b1fae0b65b502635d11d14b3726d1 SHA512 07e4603fca9cc02300acf096a1fe31cfa2c2ce90ad5d31a84b70972ec4d5508050bab961784cfdda45a04bc4a3dca4a2813dd452828348dbb111d20af6ec13c3 WHIRLPOOL 28c455e2462056e5b28fdb9fa80f60bf8bc1dc2e4b4a52b87b46d553a4e553ec3ebb11be574b8190f23623e2cf42904b29e5820977e10c09cc16f1b33013a83c
diff --git a/sci-biology/ngsview/metadata.xml b/sci-biology/ngsview/metadata.xml
new file mode 100644
index 000000000..2bc893037
--- /dev/null
+++ b/sci-biology/ngsview/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-biology</herd>
+ <maintainer>
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/ngsview/ngsview-0.91.ebuild b/sci-biology/ngsview/ngsview-0.91.ebuild
new file mode 100644
index 000000000..7185fd496
--- /dev/null
+++ b/sci-biology/ngsview/ngsview-0.91.ebuild
@@ -0,0 +1,27 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=3
+
+DESCRIPTION="Display and edit next-gen sequence alignment (BED, BLAST, Eland, mapview processed MAQ, Corona formats)"
+HOMEPAGE="http://sourceforge.net/projects/ngsview"
+SRC_URI="http://sourceforge.net/projects/ngsview/files/ngsview/ngsview-0.91.tar.gz"
+
+# http://ngsview.sourceforge.net/manual.html
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+DEPEND="media-gfx/graphviz
+ >=sys-libs/db-4.3
+ >=dev-qt/qtcore-4"
+RDEPEND="${DEPEND}"
+
+src_compile(){
+ cd src/trapper || die "Cannot cd to src/trapper"
+ qmake || die
+ make || die
+}