diff options
| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-07-29 11:20:54 +0200 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-07-29 11:20:54 +0200 |
| commit | 72d56ebd894309c383e7a1f54b0c13dce2be6d7d (patch) | |
| tree | c1527376861ba48f8bced2b108da56d9337f3f7b /sci-biology | |
| parent | sci-biology/graf-bin: new binary package (diff) | |
| download | sci-72d56ebd894309c383e7a1f54b0c13dce2be6d7d.tar.gz sci-72d56ebd894309c383e7a1f54b0c13dce2be6d7d.tar.bz2 sci-72d56ebd894309c383e7a1f54b0c13dce2be6d7d.zip | |
sci-biology/twinscan: do not install test.pl, keep track of file collision
Package-Manager: portage-2.3.0
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/twinscan/twinscan-4.1.2-r1.ebuild | 7 |
1 files changed, 5 insertions, 2 deletions
diff --git a/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild b/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild index 469ac6357..a4c3258a2 100644 --- a/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild +++ b/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2015 Gentoo Foundation +# Copyright 1999-2016 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ @@ -7,7 +7,7 @@ EAPI=5 PERL_EXPORT_PHASE_FUNCTIONS=no inherit perl-module eutils toolchain-funcs -DESCRIPTION="iscan (aka twinscan and N-SCAN) and wrapper around Pairagon: A gene structure prediction pipeline" +DESCRIPTION="iscan (aka twinscan and N-SCAN), Pairagon wrapper: Gene structure pred. pipeline" HOMEPAGE="http://mblab.wustl.edu/software/twinscan" SRC_URI="http://mblab.wustl.edu/software/download/iscan-${PV}.tar_.gz -> ${P}.tar.gz" @@ -39,6 +39,9 @@ src_prepare() { } src_install() { + # TODO: prevent file collision with media-gfx/iscan by renaming iscan to iscan_twinscan + # also fix a Genscan++ToZoe.pl Nscan_driver.pl runTwinscan2.pl run_iscan.pl run_iscan_cons.pl run_iscan_cons_list.pl test.pl + rm bin/test.pl || die dobin bin/iscan bin/zoe2gtf bin/*.pl src/*.pl dolib lib/libzoe.a insinto /usr/share/${PN} |