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| author |   Justin Lecher (jlec) <jlec@j-schmitz.net> | 2009-10-27 21:02:32 +0100 |
|---|---|---|
| committer | Justin Lecher (jlec) <jlec@j-schmitz.net> | 2009-10-28 21:35:20 +0100 |
| commit | ee57fa7cafcf3d1790442527e9fe72625c91fcc8 (patch) | |
| tree | 0ca3f3cbe86602acada2a668015365219de4eb3f /sci-biology | |
| parent | renamed patch which was missing (diff) | |
| download | sci-ee57fa7cafcf3d1790442527e9fe72625c91fcc8.tar.gz sci-ee57fa7cafcf3d1790442527e9fe72625c91fcc8.tar.bz2 sci-ee57fa7cafcf3d1790442527e9fe72625c91fcc8.zip | |
import from stride
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/stride/ChangeLog | 29 | ||||
| -rw-r--r-- | sci-biology/stride/Manifest | 5 | ||||
| -rw-r--r-- | sci-biology/stride/metadata.xml | 9 | ||||
| -rw-r--r-- | sci-biology/stride/stride-20011129-r1.ebuild | 34 |
4 files changed, 77 insertions, 0 deletions
diff --git a/sci-biology/stride/ChangeLog b/sci-biology/stride/ChangeLog new file mode 100644 index 000000000..773e384a2 --- /dev/null +++ b/sci-biology/stride/ChangeLog @@ -0,0 +1,29 @@ +# ChangeLog for sci-biology/stride +# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/stride/ChangeLog,v 1.6 2007/09/20 14:35:18 coldwind Exp $ + + 20 Sep 2007; Santiago M. Mola <coldwind@gentoo.org> + stride-20011129.ebuild: + Change sed separator to :, now it doesn't fail if CC contains a path. + + 22 May 2007; Olivier Fisette <ribosome@gentoo.org> stride-20011129.ebuild: + Updated home page. + + 03 Dec 2006; Steve Dibb <beandog@gentoo.org> stride-20011129.ebuild: + Add ~amd64, bug 147983 + + 01 Oct 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml: + Transfer to sci-biology herd from sci. + + 28 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; + stride-20011129.ebuild: + Keyword ~ppc. + +*stride-20011129 (23 Jul 2006) + + 23 Jul 2006; Markus Dittrich <markusle@gentoo.org> +metadata.xml, + +stride-20011129.ebuild: + Initial import. Many thanks go the the author Dmitrij Frishman + <d.frishman@wzw.tum.de> for allowing us to distribute the source + and for an updated version of the code. + diff --git a/sci-biology/stride/Manifest b/sci-biology/stride/Manifest new file mode 100644 index 000000000..58cab1cd3 --- /dev/null +++ b/sci-biology/stride/Manifest @@ -0,0 +1,5 @@ +DIST stride-20060723-update.patch.bz2 5621 RMD160 c5ac88dcff4d074adb18fb09cc39f37e6b95d82a SHA1 a57e7780d2dd44ce53e72dac35ed4d8539a83d10 SHA256 8d48627c294b4efba67acba10fba47b20c0a8d5f7e06c2775a2d7eaaa0aa7b81 +DIST stride.tar.gz 56441 RMD160 6fdcf064f37ce44529446a043b56663af9765054 SHA1 f85cca717c79200bf33fa3a80323ccd9da471669 SHA256 d272700bccd046199f6ea1faed31a2a2662a7d5f13b7663736a1818ac18c87b9 +EBUILD stride-20011129.ebuild 1003 RMD160 775392d19dc194b0f8ab07fd0a1cd9ea81374bd5 SHA1 d0587bec117b9b4f2859ca8837fdeef3ea1f1bee SHA256 b8c519c592d6a290e2a2dd516580d45c4028c320c431c3d5c3bfa72f9bac2e76 +MISC ChangeLog 1071 RMD160 d5e709200df9667ad51dc538b6b990ca7ed21919 SHA1 b385a5dcc68636fa354deed50a193511136ac3ab SHA256 8902fd640c18d9099daffb1c796da4e5e9d2c0c099dae06bd50fe368dfbed5c0 +MISC metadata.xml 262 RMD160 346498c47da29f51b223d00c4d2cdf35e69386f6 SHA1 fdf6cc4c581eb3162837bfde3334803445332489 SHA256 732b5b7d88c83d3b0bd0be860f512d9545353e2a2c89b873da8c2217394736c7 diff --git a/sci-biology/stride/metadata.xml b/sci-biology/stride/metadata.xml new file mode 100644 index 000000000..12ba45ba5 --- /dev/null +++ b/sci-biology/stride/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>markusle@gentoo.org</email> + <name>Markus Dittrich</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> diff --git a/sci-biology/stride/stride-20011129-r1.ebuild b/sci-biology/stride/stride-20011129-r1.ebuild new file mode 100644 index 000000000..7ca196e43 --- /dev/null +++ b/sci-biology/stride/stride-20011129-r1.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2007 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/stride/stride-20011129.ebuild,v 1.6 2007/09/20 14:35:18 coldwind Exp $ + +inherit eutils toolchain-funcs + +DESCRIPTION="A program for protein secondary structure assignment from atomic coordinates." +LICENSE="as-is" +HOMEPAGE="http://www.embl-heidelberg.de/argos/stride/stride_info.html" +SRC_URI="ftp://ftp.ebi.ac.uk/pub/software/unix/${PN}/src/${PN}.tar.gz + mirror://gentoo/${PN}-20060723-update.patch.bz2" + +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86" +IUSE="" + +S="${WORKDIR}" + +src_unpack() { + unpack ${A} + cd "${S}" + + # this patch updates the source to the most recent + # version which was kindly provided by the author + epatch "${DISTDIR}/${PN}-20060723-update.patch.bz2" + + # fix makefile + sed -e "/^CC/s:gcc -g:$(tc-getCC) ${CFLAGS}:" -i Makefile || \ + die "Failed to fix Makefile" +} + +src_install() { + dobin ${PN} || die "Failed to install stride binary" +} |