Version bump

1 files changed, 76 insertions, 0 deletions

diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15.ebuild
new file mode 100644
index 000000000..35cea00da
--- /dev/null
+++ b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15.ebuild
@@ -0,0 +1,76 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild,v 1.2 2009/03/15 17:58:50 maekke Exp $
+
+# TODO: testing on x86
+
+EAPI="2"
+
+inherit multilib
+
+MY_TAG="May_15_2009"
+MY_Y="${TAG/*_/}"
+MY_P="ncbi_cxx--${MY_TAG}"
+
+DESCRIPTION="NCBI C++ Toolkit"
+HOMEPAGE="http://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=toolkit"
+SRC_URI="ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/${MY_Y}/${MY_TAG}/${MY_P}.tar.gz"
+
+LICENSE="public-domain"
+SLOT="0"
+IUSE="X unicode opengl gnutls -minimal"
+KEYWORDS="~amd64 ~x86"
+
+# wxGTK: must run eselect wxwindows after installing wxgtk or build will fail. Check and abort here.
+# dev-libs/xalan-c - problems detecting, api mismatch?
+DEPEND="!minimal? ( dev-libs/libxml2
+	dev-libs/libxslt
+	dev-db/sqlite:3
+	dev-libs/xerces-c
+	media-libs/libpng
+	media-libs/tiff
+	media-libs/jpeg
+	x11-libs/libXpm
+	dev-libs/lzo:2
+	app-text/sablotron
+	dev-libs/boost
+	unicode? ( dev-libs/icu )
+	opengl? ( media-libs/glut
+		media-libs/mesa )
+	gnutls? ( net-libs/gnutls )
+	X? ( x11-libs/fltk
+		x11-libs/wxGTK ) )"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+src_configure() {
+	# econf fails
+	"${S}"/configure --without-debug --with-bin-release --prefix="${D}"/usr \
+		--libdir="${D}"/usr/$(get_libdir) \
+		--with-z="/usr" \
+		--with-bz2="/usr" \
+		--with-pcre="/usr" \
+		--with-openssl="/usr" \
+		--with-icu="/usr" \
+		--with-boost="/usr" \
+		--with-fltk="/usr" \
+		--with-mesa="/usr" \
+		--with-glut="/usr" \
+		--with-sablot="/usr" \
+		--without-wxwidgets \
+		|| die
+#		--with-xalan="/usr" \
+#		--with-wxwidgets="/usr" \
+}
+
+src_compile() {
+	emake all_r -C GCC*-Release*/build || die
+}
+
+src_install() {
+	emake install || die
+	# File collisions with sci-biology/ncbi-tools
+	rm -f "${D}"/usr/bin/{asn2asn,rpsblast,test_regexp}
+	rm -f "${D}"/usr/$(get_libdir)/libblast.a
+}