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| author |   Justin Lecher (jlec) <jlec@j-schmitz.net> | 2009-05-26 14:36:29 +0200 |
|---|---|---|
| committer | Justin Lecher (jlec) <jlec@j-schmitz.net> | 2009-05-26 14:36:29 +0200 |
| commit | cbb13346d98bc9073268d8cfa084ecdc2e1de9c1 (patch) | |
| tree | 029cae0abf579e4a90f5febb62115f83e7a9a8a0 /sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch | |
| parent | mgltools-webservices dependency fix (diff) | |
| download | sci-cbb13346d98bc9073268d8cfa084ecdc2e1de9c1.tar.gz sci-cbb13346d98bc9073268d8cfa084ecdc2e1de9c1.tar.bz2 sci-cbb13346d98bc9073268d8cfa084ecdc2e1de9c1.zip | |
version bump of refmac
A problem related with TLS has been fixed. The problem was that not in all cycle TLS contributions were added to B values and that could make refinement unstable.
and guile-www added
bug 271283
Diffstat (limited to 'sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch')
| -rw-r--r-- | sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch | 66 |
1 files changed, 66 insertions, 0 deletions
diff --git a/sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch b/sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch new file mode 100644 index 000000000..415ba9d08 --- /dev/null +++ b/sci-chemistry/refmac/files/5.5.0094-allow-dynamic-linking.patch @@ -0,0 +1,66 @@ +--- makefile_refmac.inc1.orig 2008-08-01 22:17:14.000000000 -0700 ++++ makefile_refmac.inc1 2008-08-01 22:18:46.000000000 -0700 +@@ -69,9 +69,7 @@ + bridge.o \ + i0.o \ + i1.o \ +-chbevl.o \ +-$(LLIBCIF) \ +-$(LLIBLAPACK) ++chbevl.o + #$(LLIBCCP) \ + #crt0.o \ + +@@ -95,8 +93,7 @@ + emin.o \ + libcheck_min.o \ + mol2_file.o \ +-sdf_files.o \ +-$(LLIBCCP) ++sdf_files.o + + SUBM = \ + main_makecif.o \ +@@ -116,9 +113,7 @@ + make_PDB.o \ + makecif.o \ + make_unix_ccp4.o \ +-make_vdw.o \ +-$(LLIBCCP) \ +-$(LLIBCIF) ++make_vdw.o + + SUBT = \ + tlsgroups.o \ +@@ -142,9 +137,7 @@ + inout_routines.o \ + errwrt_1.o \ + linalgebra.o \ +-subnumrec.o \ +-$(LLIBCCP) \ +-$(LLIBCIF) ++subnumrec.o + #-------------------------------------------------------------------------------- + + ed = echo 'g/^CMDW-5.0/s// /@w@q@' | tr "@" "\012" | ed -s +@@ -154,16 +147,16 @@ + all: refmac libcheck makecif + + refmac: $(SUBR) +- $(FC) $(FFLAGS) -o refmac${VERSION} ${SUBR} $(LLIBOTHERS) $(LLIBCCP) ++ $(FC) $(FFLAGS) $(LDFLAGS) -o refmac${VERSION} ${SUBR} $(LLIBOTHERS) $(LLIBCCP) $(LLIBCIF) $(LLIBLAPACK) + + libcheck: $(SUBL) +- $(FC) $(FFLAGS) -o libcheck${VERSION} $(SUBL) ++ $(FC) $(FFLAGS) $(LDFLAGS) -o libcheck${VERSION} $(SUBL) $(LLIBCCP) + + makecif: $(SUBM) +- $(FC) $(FFLAGS) -o makecif${VERSION} $(SUBM) ++ $(FC) $(FFLAGS) $(LDFLAGS) -o makecif${VERSION} $(SUBM) $(LLIBCCP) $(LLIBCIF) + + tlsgroups: $(SUBT) +- $(FC) $(FFLAGS) -o tlsgroups${VERSION} $(SUBT) ++ $(FC) $(FFLAGS) $(LDFLAGS) -o tlsgroups${VERSION} $(SUBT) $(LLIBCCP) $(LLIBCIF) + + clean: + /bin/rm *.o |