diff options
| author |   Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2021-08-31 11:23:41 +0200 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2021-08-31 11:23:41 +0200 |
| commit | e97b1a4d5fa82dd7d9e03ad46cc4aca4c1d52eb8 (patch) | |
| tree | 41a57f6ca117aedaabb108913dc3b02aac406950 /sci-chemistry | |
| parent | sci-biology/maker: remove last-rited pack (diff) | |
| download | sci-e97b1a4d5fa82dd7d9e03ad46cc4aca4c1d52eb8.tar.gz sci-e97b1a4d5fa82dd7d9e03ad46cc4aca4c1d52eb8.tar.bz2 sci-e97b1a4d5fa82dd7d9e03ad46cc4aca4c1d52eb8.zip | |
sci-chemistry/talosn: remove last-rited pack
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/talosn/Manifest | 1 | ||||
| -rw-r--r-- | sci-chemistry/talosn/metadata.xml | 8 | ||||
| -rw-r--r-- | sci-chemistry/talosn/talosn-4.12.2015.147.15.40.ebuild | 68 |
3 files changed, 0 insertions, 77 deletions
diff --git a/sci-chemistry/talosn/Manifest b/sci-chemistry/talosn/Manifest deleted file mode 100644 index fbfff5dbd..000000000 --- a/sci-chemistry/talosn/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST talosn-4.12.2015.147.15.40.tgz 137074857 BLAKE2B 950ed21334b4e2b97164ba90b9a60f4f7ad738da955d763c0388bbad3029dd8d49e0e443309e0faaa0028375fb3a0e28291f805075cadffe96c985cc9618f296 SHA512 2d4150434687e394303cabb5153b39037f427dd7137650beeaac1f161fdb1c77c43a37fe61df3182b9a4425d88ef531f4a855a88bd5e9ed19ed662640b347df9 diff --git a/sci-chemistry/talosn/metadata.xml b/sci-chemistry/talosn/metadata.xml deleted file mode 100644 index da36ecbfc..000000000 --- a/sci-chemistry/talosn/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> -</pkgmetadata> diff --git a/sci-chemistry/talosn/talosn-4.12.2015.147.15.40.ebuild b/sci-chemistry/talosn/talosn-4.12.2015.147.15.40.ebuild deleted file mode 100644 index 1fbcea875..000000000 --- a/sci-chemistry/talosn/talosn-4.12.2015.147.15.40.ebuild +++ /dev/null @@ -1,68 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit java-pkg-opt-2 - -DESCRIPTION="Prediction of Protein bb and sc Torsion Angles from NMR Chemical Shifts" -HOMEPAGE="https://spin.niddk.nih.gov/bax/software/TALOS-N/" -SRC_URI="https://spin.niddk.nih.gov/bax/software/TALOS-N/talosn.tZ -> ${P}.tgz" - -SLOT="0" -LICENSE="all-rights-reserved" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" - -DEPEND=">=virtual/jre-1.5:*" -RDEPEND="${DEPEND} - app-shells/tcsh - sci-biology/ncbi-tools" - -S="${WORKDIR}" - -QA_PREBUILT="/opt/.*" - -src_prepare() { - default - local s64 - use amd64 || s64="_x64" - rm -f bin/TALOSN.{linux,mac,static.*,winxp,linux9${s64}} || die - - sed \ - -e '/setenv TALOSN_DIR/d' \ - -e "/set BLAST/s:=.*:= \"${EPREFIX}/usr/bin/blastpgp\":g" \ - -e '/set NR_DBNAME/s:=.*:= ${BLASTDB}:g' \ - -i talosn_ss || die -} - -src_install() { - local TALOSN="/opt/${PN}" - exeinto ${TALOSN}/bin - doexe bin/* - - exeinto ${TALOSN}/com - doexe com/* - - exeinto /opt/bin - doexe talosn{,_ss} - - insinto ${TALOSN} - doins -r tab - - java-pkg_jarinto ${TALOSN} - java-pkg_dojar rama.jar - - java-pkg_dolauncher jrama --jar rama.jar -into /opt/ - - if use examples; then - insinto /usr/share/${PN} - doins -r demo - fi - - cat >> "${T}"/40talosn <<- EOF - TALOSN_DIR="${EPREFIX}/${TALOSN}" - #BLASTDB= - EOF - doenvd "${T}"/40talosn -} |