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authorMatthias Maier <tamiko@gentoo.org>2019-08-05 01:42:44 -0500
committerMatthias Maier <tamiko@gentoo.org>2019-08-05 01:43:12 -0500
commit45270dd4d64499b85d5328fd8744f3cccf3e4a12 (patch)
tree905ca5fb829d71edab8b75a10bcfabcd27944667 /sci-libs
parentsci-libs/dealii: bump patch level to 9.1.1 (diff)
downloadsci-45270dd4d64499b85d5328fd8744f3cccf3e4a12.tar.gz
sci-45270dd4d64499b85d5328fd8744f3cccf3e4a12.tar.bz2
sci-45270dd4d64499b85d5328fd8744f3cccf3e4a12.zip
sci-libs/dealii: merge into ::gentoo and remove from overlay.
Signed-off-by: Matthias Maier <tamiko@gentoo.org>
Diffstat (limited to 'sci-libs')
-rw-r--r--sci-libs/dealii/Manifest6
-rw-r--r--sci-libs/dealii/dealii-8.5.0.ebuild128
-rw-r--r--sci-libs/dealii/dealii-9.0.1.ebuild143
-rw-r--r--sci-libs/dealii/dealii-9.1.1.ebuild145
-rw-r--r--sci-libs/dealii/dealii-9999.ebuild145
-rw-r--r--sci-libs/dealii/metadata.xml46
6 files changed, 0 insertions, 613 deletions
diff --git a/sci-libs/dealii/Manifest b/sci-libs/dealii/Manifest
deleted file mode 100644
index 96d94ddb2..000000000
--- a/sci-libs/dealii/Manifest
+++ /dev/null
@@ -1,6 +0,0 @@
-DIST dealii-8.5.0-offline_documentation.tar.gz 158982121 BLAKE2B 50b7dd68e3a4b82db8ae33dacea3d21feb4bce2b8f5fc1b9f33b5ef1190d7b11a582e1ddfd30dcbc5b1fed95e026d390b68bd0c9dd112877abd6c40448c43904 SHA512 ccf5de81ab23f698d9d8331286524328fa8934ef36c251b9c5c999c9532114b550e4ab7899a02925a6b41fc7b4f9554c3796a62c0f4397e1cbe6abbf898fdab8
-DIST dealii-8.5.0.tar.gz 14919546 BLAKE2B 686ff5d66ce20d2da8a37e44bdca04a249881da8ab09b1fbd1e6fb0496b53e14b05ce576dcf3539b30443cec680e89c5bae3f3442417c66af726709de39ccfa3 SHA512 58a8cb18aa166a46e25c03335d0b65515452080858593fe35b93623e45cd340fbc7bce1059388c055736c2f5c154c4b68df1620cf8ad9ff6b07644541b60accc
-DIST dealii-9.0.1-offline_documentation.tar.gz 171325206 BLAKE2B 8e912b4b44a9fe6a11677cbf48898cd8f2673669e58aacfed639b0dceb375f9e5d63fee13a399532d014ea5186af598c10dcb8f9a7ed4578c67ff8d18b38856a SHA512 d300c317003db4b4a201dfe89166fb9e019c57e68799d9b475d8856571e86c38dadda163030102220aed4c267e1cf020928456e82e8f6819a92cd756f4c90aad
-DIST dealii-9.0.1.tar.gz 17637370 BLAKE2B 2b7010e3c76f7e14da63d13f77ce35edb107f2aed24616c883858be72e2f1bb5f2dbb800f168d22fa8f68e8fd80c354a618d62bd6f1597646d571663e50987b1 SHA512 cb01083ac3870728c8ffe5e2a542219e24f4611009ede819b6ff8c0d6fc92de2de052f39d5e5cbc3a36159763db9b3f5b4652f300d105108b046b327c447ee26
-DIST dealii-9.1.1-offline_documentation.tar.gz 211103151 BLAKE2B ef7cf48aa8019a2d42a38804744ff72cc7f744255fa27df852f8f93c86a02f2125458e0e525e57510bb98adc27aed933fefa27d556d8203c991dae9866c7d57a SHA512 5e2b71e9bdeb80875772356e2c873bc1f065f2a8c5c47923b74b471d464e4867c257e3a47b32341aa60af98e74e3ed2eceba8dedb4b157ab872681576ecbd5db
-DIST dealii-9.1.1.tar.gz 19911088 BLAKE2B e8488833f11339ccffd4791b9b46ab77f1982cbbdeb11fab7f6b74ca2e17c3d648a2940f4462d0ac9c68bd619b3c4f43b4d8052d2903cbb9cae2fece93d81987 SHA512 02dd91e2b0f395960f900f4cbe00bd307a4762ffbc5f3838dcc34828937e96727efbbcc66fc3d357d6b00b0dddcbc6cd7709c4c03f067d92a8f72d4631b88bf1
diff --git a/sci-libs/dealii/dealii-8.5.0.ebuild b/sci-libs/dealii/dealii-8.5.0.ebuild
deleted file mode 100644
index 50b6e6d7e..000000000
--- a/sci-libs/dealii/dealii-8.5.0.ebuild
+++ /dev/null
@@ -1,128 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit cmake-utils eutils multilib
-
-# deal.II uses its own FindLAPACK.cmake file that calls into the system
-# FindLAPACK.cmake module and does additional internal setup. Do not remove
-# any of these modules:
-CMAKE_REMOVE_MODULES_LIST=""
-
-DESCRIPTION="Solving partial differential equations with the finite element method"
-HOMEPAGE="http://www.dealii.org/"
-
-if [[ ${PV} = *9999* ]]; then
- inherit git-r3
- EGIT_REPO_URI="git://github.com/dealii/dealii.git"
- SRC_URI=""
- KEYWORDS=""
-else
- MY_PV="${PV//0_rc/rc}"
- MY_P="${PN}-${MY_PV}"
- SRC_URI="https://github.com/dealii/dealii/archive/v${MY_PV}.tar.gz -> ${P}.tar.gz
- doc? (
- https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}-offline_documentation.tar.gz
- -> ${P}-offline_documentation.tar.gz
- )"
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
- S="${WORKDIR}/${PN}-${MY_PV}"
-fi
-
-LICENSE="LGPL-2.1+"
-SLOT="0"
-IUSE="
- arpack cpu_flags_x86_avx cpu_flags_x86_sse2 c++11 +debug doc +examples
- +gsl hdf5 +lapack metis mpi muparser opencascade netcdf p4est petsc
- slepc +sparse static-libs +tbb trilinos
-"
-
-# TODO: add slepc use flag once slepc is packaged for gentoo-science
-REQUIRED_USE="
- p4est? ( mpi )
- slepc? ( petsc )
- trilinos? ( mpi )"
-
-RDEPEND="dev-libs/boost
- app-arch/bzip2
- sys-libs/zlib
- arpack? ( sci-libs/arpack[mpi=] )
- gsl? ( sci-libs/gsl )
- hdf5? ( sci-libs/hdf5[mpi=] )
- lapack? ( virtual/lapack )
- metis? ( >=sci-libs/parmetis-4 )
- mpi? ( virtual/mpi )
- muparser? ( dev-cpp/muParser )
- netcdf? ( sci-libs/netcdf-cxx:0 )
- opencascade? ( sci-libs/opencascade:* )
- p4est? ( sci-libs/p4est[mpi] )
- petsc? ( sci-mathematics/petsc[mpi=] )
- slepc? ( sci-mathematics/slepc[mpi=] )
- sparse? ( sci-libs/umfpack )
- tbb? ( dev-cpp/tbb )
- trilinos? ( sci-libs/trilinos )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig
- doc? ( app-doc/doxygen[dot] dev-lang/perl )"
-
-src_configure() {
- # deal.II needs a custom build type:
- local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
-
- local mycmakeargs=(
- -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
- -DDEAL_II_ALLOW_AUTODETECTION=OFF
- -DDEAL_II_ALLOW_BUNDLED=OFF
- -DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html"
- -DDEAL_II_DOCREADME_RELDIR="share/doc/${P}"
- -DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples"
- -DDEAL_II_LIBRARY_RELDIR="$(get_libdir)"
- -DDEAL_II_SHARE_RELDIR="share/${PN}"
- -DDEAL_II_WITH_BZIP2=ON
- -DDEAL_II_WITH_ZLIB=ON
- -DDEAL_II_WITH_ARPACK="$(usex arpack)"
- -DDEAL_II_WITH_CXX11="$(usex c++11)"
- -DDEAL_II_HAVE_AVX="$(usex cpu_flags_x86_avx)"
- -DDEAL_II_HAVE_SSE2="$(usex cpu_flags_x86_sse2)"
- -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)"
- -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)"
- -DDEAL_II_WITH_GSL="$(usex gsl)"
- -DDEAL_II_WITH_HDF5="$(usex hdf5)"
- -DDEAL_II_WITH_LAPACK="$(usex lapack)"
- -DDEAL_II_WITH_METIS="$(usex metis)"
- -DDEAL_II_WITH_MPI="$(usex mpi)"
- -DDEAL_II_WITH_MUPARSER="$(usex muparser)"
- -DDEAL_II_WITH_NETCDF="$(usex netcdf)"
- -DOPENCASCADE_DIR="${CASROOT}"
- -DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)"
- -DDEAL_II_WITH_P4EST="$(usex p4est)"
- -DDEAL_II_WITH_PETSC="$(usex petsc)"
- -DDEAL_II_WITH_SLEPC="$(usex slepc)"
- -DDEAL_II_WITH_UMFPACK="$(usex sparse)"
- -DBUILD_SHARED_LIBS="$(usex !static-libs)"
- -DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)"
- -DDEAL_II_WITH_THREADS="$(usex tbb)"
- -DDEAL_II_WITH_TRILINOS="$(usex trilinos)"
- )
- cmake-utils_src_configure
-}
-
-src_install() {
- if use doc && [[ ${PV} != *9999* ]]; then
- # copy missing images to the build directory:
- cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \
- "${BUILD_DIR}"/doc/doxygen/deal.II || die
- # replace links:
- sed -i \
- 's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \
- "${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed"
- fi
- cmake-utils_src_install
-
- # decompress the installed example sources:
- use examples && docompress -x /usr/share/doc/${PF}/examples
-}
diff --git a/sci-libs/dealii/dealii-9.0.1.ebuild b/sci-libs/dealii/dealii-9.0.1.ebuild
deleted file mode 100644
index e95ceab6e..000000000
--- a/sci-libs/dealii/dealii-9.0.1.ebuild
+++ /dev/null
@@ -1,143 +0,0 @@
-# Copyright 1999-2018 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit cmake-utils eutils multilib
-
-# deal.II uses its own FindLAPACK.cmake file that calls into the system
-# FindLAPACK.cmake module and does additional internal setup. Do not remove
-# any of these modules:
-CMAKE_REMOVE_MODULES_LIST=""
-
-DESCRIPTION="Solving partial differential equations with the finite element method"
-HOMEPAGE="http://www.dealii.org/"
-
-if [[ ${PV} = *9999* ]]; then
- inherit git-r3
- EGIT_REPO_URI="https://github.com/dealii/dealii.git"
- SRC_URI=""
- KEYWORDS=""
-else
- MY_PV="${PV//0_rc/rc}"
- MY_P="${PN}-${MY_PV}"
- SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}.tar.gz
- doc? (
- https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}-offline_documentation.tar.gz
- -> ${P}-offline_documentation.tar.gz
- )"
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
- S="${WORKDIR}/${PN}-${MY_PV}"
-fi
-
-LICENSE="LGPL-2.1+"
-SLOT="0"
-IUSE="
- adolc assimp arpack cpu_flags_x86_avx cpu_flags_x86_sse2 cuda +debug
- doc +examples gmsh +gsl hdf5 +lapack metis mpi muparser nanoflann
- opencascade netcdf p4est petsc scalapack slepc +sparse static-libs
- sundials +tbb trilinos
-"
-
-# TODO: add slepc use flag once slepc is packaged for gentoo-science
-REQUIRED_USE="
- p4est? ( mpi )
- slepc? ( petsc )
- trilinos? ( mpi )"
-
-RDEPEND="dev-libs/boost
- app-arch/bzip2
- sys-libs/zlib
- adolc? ( sci-libs/adolc )
- arpack? ( sci-libs/arpack[mpi=] )
- assimp? ( media-libs/assimp )
- cuda? ( dev-util/nvidia-cuda-sdk )
- gmsh? ( sci-libs/gmsh )
- gsl? ( sci-libs/gsl )
- hdf5? ( sci-libs/hdf5[mpi=] )
- lapack? ( virtual/lapack )
- metis? ( >=sci-libs/parmetis-4 )
- mpi? ( virtual/mpi )
- muparser? ( dev-cpp/muParser )
- nanoflann? ( sci-libs/nanoflann )
- netcdf? ( sci-libs/netcdf-cxx:0 )
- opencascade? ( sci-libs/opencascade:* )
- p4est? ( sci-libs/p4est[mpi] )
- petsc? ( sci-mathematics/petsc[mpi=] )
- scalapack? ( sci-libs/scalapack )
- slepc? ( sci-mathematics/slepc[mpi=] )
- sparse? ( sci-libs/umfpack )
- sundials? ( sci-libs/sundials )
- tbb? ( dev-cpp/tbb )
- trilinos? ( sci-libs/trilinos )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig
- doc? ( app-doc/doxygen[dot] dev-lang/perl )"
-
-src_configure() {
- # deal.II needs a custom build type:
- local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
-
- local mycmakeargs=(
- -DDEAL_II_PACKAGE_VERSION=9999
- -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
- -DDEAL_II_ALLOW_AUTODETECTION=OFF
- -DDEAL_II_ALLOW_BUNDLED=OFF
- -DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html"
- -DDEAL_II_DOCREADME_RELDIR="share/doc/${P}"
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples"
- -DDEAL_II_LIBRARY_RELDIR="$(get_libdir)"
- -DDEAL_II_SHARE_RELDIR="share/${PN}"
- -DDEAL_II_WITH_ZLIB=ON
- -DDEAL_II_WITH_ADOLC="$(usex adolc)"
- -DDEAL_II_WITH_ASSIMP="$(usex assimp)"
- -DDEAL_II_WITH_ARPACK="$(usex arpack)"
- -DDEAL_II_HAVE_AVX="$(usex cpu_flags_x86_avx)"
- -DDEAL_II_WITH_CUDA="$(usex cuda)"
- -DDEAL_II_HAVE_SSE2="$(usex cpu_flags_x86_sse2)"
- -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)"
- -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)"
- -DDEAL_II_WITH_GMSH="$(usex gmsh)"
- -DDEAL_II_WITH_GSL="$(usex gsl)"
- -DDEAL_II_WITH_HDF5="$(usex hdf5)"
- -DDEAL_II_WITH_LAPACK="$(usex lapack)"
- -DDEAL_II_WITH_METIS="$(usex metis)"
- -DDEAL_II_WITH_MPI="$(usex mpi)"
- -DDEAL_II_WITH_MUPARSER="$(usex muparser)"
- -DDEAL_II_WITH_NANOFLANN="$(usex nanoflann)"
- -DDEAL_II_WITH_NETCDF="$(usex netcdf)"
- -DOPENCASCADE_DIR="${CASROOT}"
- -DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)"
- -DDEAL_II_WITH_P4EST="$(usex p4est)"
- -DDEAL_II_WITH_PETSC="$(usex petsc)"
- -DDEAL_II_WITH_SCALAPACK="$(usex scalapack)"
- -DDEAL_II_WITH_SLEPC="$(usex slepc)"
- -DDEAL_II_WITH_SUNDIALS="$(usex sundials)"
- -DDEAL_II_WITH_UMFPACK="$(usex sparse)"
- -DBUILD_SHARED_LIBS="$(usex !static-libs)"
- -DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)"
- -DDEAL_II_WITH_THREADS="$(usex tbb)"
- -DDEAL_II_WITH_TRILINOS="$(usex trilinos)"
- )
- cmake-utils_src_configure
-}
-
-src_install() {
- if use doc && [[ ${PV} != *9999* ]]; then
- # copy missing images to the build directory:
- cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \
- "${BUILD_DIR}"/doc/doxygen/deal.II || die
- # replace links:
- sed -i \
- 's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \
- "${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed"
- fi
- cmake-utils_src_install
-
- # decompress the installed example sources:
- use examples && docompress -x /usr/share/doc/${PF}/examples
-}
diff --git a/sci-libs/dealii/dealii-9.1.1.ebuild b/sci-libs/dealii/dealii-9.1.1.ebuild
deleted file mode 100644
index 0da4f8ea6..000000000
--- a/sci-libs/dealii/dealii-9.1.1.ebuild
+++ /dev/null
@@ -1,145 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit cmake-utils eutils multilib
-
-# deal.II uses its own FindLAPACK.cmake file that calls into the system
-# FindLAPACK.cmake module and does additional internal setup. Do not remove
-# any of these modules:
-CMAKE_REMOVE_MODULES_LIST=""
-
-DESCRIPTION="Solving partial differential equations with the finite element method"
-HOMEPAGE="http://www.dealii.org/"
-
-if [[ ${PV} = *9999* ]]; then
- inherit git-r3
- EGIT_REPO_URI="https://github.com/dealii/dealii.git"
- SRC_URI=""
- KEYWORDS=""
-else
- MY_PV="${PV//0_rc/rc}"
- MY_P="${PN}-${MY_PV}"
- SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}.tar.gz -> ${P}.tar.gz
- doc? (
- https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}-offline_documentation.tar.gz
- -> ${P}-offline_documentation.tar.gz
- )"
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
- S="${WORKDIR}/${PN}-${MY_PV}"
-fi
-
-LICENSE="LGPL-2.1+"
-SLOT="0"
-IUSE="
- adolc assimp arpack cpu_flags_x86_avx cpu_flags_x86_sse2 cuda +debug
- doc +examples gmsh +gsl hdf5 +lapack metis mpi muparser nanoflann
- opencascade netcdf p4est petsc scalapack slepc +sparse static-libs
- sundials symengine +tbb trilinos
-"
-
-# TODO: add slepc use flag once slepc is packaged for gentoo-science
-REQUIRED_USE="
- p4est? ( mpi )
- slepc? ( petsc )
- trilinos? ( mpi )"
-
-RDEPEND="dev-libs/boost
- app-arch/bzip2
- sys-libs/zlib
- adolc? ( sci-libs/adolc )
- arpack? ( sci-libs/arpack[mpi=] )
- assimp? ( media-libs/assimp )
- cuda? ( dev-util/nvidia-cuda-sdk )
- gmsh? ( sci-libs/gmsh )
- gsl? ( sci-libs/gsl )
- hdf5? ( sci-libs/hdf5[mpi=] )
- lapack? ( virtual/lapack )
- metis? ( >=sci-libs/parmetis-4 )
- mpi? ( virtual/mpi )
- muparser? ( dev-cpp/muParser )
- nanoflann? ( sci-libs/nanoflann )
- netcdf? ( sci-libs/netcdf-cxx:0 )
- opencascade? ( sci-libs/opencascade:* )
- p4est? ( sci-libs/p4est[mpi] )
- petsc? ( sci-mathematics/petsc[mpi=] )
- scalapack? ( sci-libs/scalapack )
- slepc? ( sci-mathematics/slepc[mpi=] )
- sparse? ( sci-libs/umfpack )
- sundials? ( sci-libs/sundials )
- symengine? ( >=sci-libs/symengine-0.4:= )
- tbb? ( dev-cpp/tbb )
- trilinos? ( sci-libs/trilinos )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig
- doc? ( app-doc/doxygen[dot] dev-lang/perl )"
-
-src_configure() {
- # deal.II needs a custom build type:
- local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
-
- local mycmakeargs=(
- -DDEAL_II_PACKAGE_VERSION=9999
- -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
- -DDEAL_II_ALLOW_AUTODETECTION=OFF
- -DDEAL_II_ALLOW_BUNDLED=OFF
- -DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html"
- -DDEAL_II_DOCREADME_RELDIR="share/doc/${P}"
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples"
- -DDEAL_II_LIBRARY_RELDIR="$(get_libdir)"
- -DDEAL_II_SHARE_RELDIR="share/${PN}"
- -DDEAL_II_WITH_ZLIB=ON
- -DDEAL_II_WITH_ADOLC="$(usex adolc)"
- -DDEAL_II_WITH_ASSIMP="$(usex assimp)"
- -DDEAL_II_WITH_ARPACK="$(usex arpack)"
- -DDEAL_II_HAVE_AVX="$(usex cpu_flags_x86_avx)"
- -DDEAL_II_WITH_CUDA="$(usex cuda)"
- -DDEAL_II_HAVE_SSE2="$(usex cpu_flags_x86_sse2)"
- -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)"
- -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)"
- -DDEAL_II_WITH_GMSH="$(usex gmsh)"
- -DDEAL_II_WITH_GSL="$(usex gsl)"
- -DDEAL_II_WITH_HDF5="$(usex hdf5)"
- -DDEAL_II_WITH_LAPACK="$(usex lapack)"
- -DDEAL_II_WITH_METIS="$(usex metis)"
- -DDEAL_II_WITH_MPI="$(usex mpi)"
- -DDEAL_II_WITH_MUPARSER="$(usex muparser)"
- -DDEAL_II_WITH_NANOFLANN="$(usex nanoflann)"
- -DDEAL_II_WITH_NETCDF="$(usex netcdf)"
- -DOPENCASCADE_DIR="${CASROOT}"
- -DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)"
- -DDEAL_II_WITH_P4EST="$(usex p4est)"
- -DDEAL_II_WITH_PETSC="$(usex petsc)"
- -DDEAL_II_WITH_SCALAPACK="$(usex scalapack)"
- -DDEAL_II_WITH_SLEPC="$(usex slepc)"
- -DDEAL_II_WITH_SUNDIALS="$(usex sundials)"
- -DDEAL_II_WITH_SYMENGINE="$(usex symengine)"
- -DDEAL_II_WITH_UMFPACK="$(usex sparse)"
- -DBUILD_SHARED_LIBS="$(usex !static-libs)"
- -DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)"
- -DDEAL_II_WITH_THREADS="$(usex tbb)"
- -DDEAL_II_WITH_TRILINOS="$(usex trilinos)"
- )
- cmake-utils_src_configure
-}
-
-src_install() {
- if use doc && [[ ${PV} != *9999* ]]; then
- # copy missing images to the build directory:
- cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \
- "${BUILD_DIR}"/doc/doxygen/deal.II || die
- # replace links:
- sed -i \
- 's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \
- "${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed"
- fi
- cmake-utils_src_install
-
- # decompress the installed example sources:
- use examples && docompress -x /usr/share/doc/${PF}/examples
-}
diff --git a/sci-libs/dealii/dealii-9999.ebuild b/sci-libs/dealii/dealii-9999.ebuild
deleted file mode 100644
index 0da4f8ea6..000000000
--- a/sci-libs/dealii/dealii-9999.ebuild
+++ /dev/null
@@ -1,145 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit cmake-utils eutils multilib
-
-# deal.II uses its own FindLAPACK.cmake file that calls into the system
-# FindLAPACK.cmake module and does additional internal setup. Do not remove
-# any of these modules:
-CMAKE_REMOVE_MODULES_LIST=""
-
-DESCRIPTION="Solving partial differential equations with the finite element method"
-HOMEPAGE="http://www.dealii.org/"
-
-if [[ ${PV} = *9999* ]]; then
- inherit git-r3
- EGIT_REPO_URI="https://github.com/dealii/dealii.git"
- SRC_URI=""
- KEYWORDS=""
-else
- MY_PV="${PV//0_rc/rc}"
- MY_P="${PN}-${MY_PV}"
- SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}.tar.gz -> ${P}.tar.gz
- doc? (
- https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}-offline_documentation.tar.gz
- -> ${P}-offline_documentation.tar.gz
- )"
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
- S="${WORKDIR}/${PN}-${MY_PV}"
-fi
-
-LICENSE="LGPL-2.1+"
-SLOT="0"
-IUSE="
- adolc assimp arpack cpu_flags_x86_avx cpu_flags_x86_sse2 cuda +debug
- doc +examples gmsh +gsl hdf5 +lapack metis mpi muparser nanoflann
- opencascade netcdf p4est petsc scalapack slepc +sparse static-libs
- sundials symengine +tbb trilinos
-"
-
-# TODO: add slepc use flag once slepc is packaged for gentoo-science
-REQUIRED_USE="
- p4est? ( mpi )
- slepc? ( petsc )
- trilinos? ( mpi )"
-
-RDEPEND="dev-libs/boost
- app-arch/bzip2
- sys-libs/zlib
- adolc? ( sci-libs/adolc )
- arpack? ( sci-libs/arpack[mpi=] )
- assimp? ( media-libs/assimp )
- cuda? ( dev-util/nvidia-cuda-sdk )
- gmsh? ( sci-libs/gmsh )
- gsl? ( sci-libs/gsl )
- hdf5? ( sci-libs/hdf5[mpi=] )
- lapack? ( virtual/lapack )
- metis? ( >=sci-libs/parmetis-4 )
- mpi? ( virtual/mpi )
- muparser? ( dev-cpp/muParser )
- nanoflann? ( sci-libs/nanoflann )
- netcdf? ( sci-libs/netcdf-cxx:0 )
- opencascade? ( sci-libs/opencascade:* )
- p4est? ( sci-libs/p4est[mpi] )
- petsc? ( sci-mathematics/petsc[mpi=] )
- scalapack? ( sci-libs/scalapack )
- slepc? ( sci-mathematics/slepc[mpi=] )
- sparse? ( sci-libs/umfpack )
- sundials? ( sci-libs/sundials )
- symengine? ( >=sci-libs/symengine-0.4:= )
- tbb? ( dev-cpp/tbb )
- trilinos? ( sci-libs/trilinos )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig
- doc? ( app-doc/doxygen[dot] dev-lang/perl )"
-
-src_configure() {
- # deal.II needs a custom build type:
- local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
-
- local mycmakeargs=(
- -DDEAL_II_PACKAGE_VERSION=9999
- -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
- -DDEAL_II_ALLOW_AUTODETECTION=OFF
- -DDEAL_II_ALLOW_BUNDLED=OFF
- -DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html"
- -DDEAL_II_DOCREADME_RELDIR="share/doc/${P}"
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples"
- -DDEAL_II_LIBRARY_RELDIR="$(get_libdir)"
- -DDEAL_II_SHARE_RELDIR="share/${PN}"
- -DDEAL_II_WITH_ZLIB=ON
- -DDEAL_II_WITH_ADOLC="$(usex adolc)"
- -DDEAL_II_WITH_ASSIMP="$(usex assimp)"
- -DDEAL_II_WITH_ARPACK="$(usex arpack)"
- -DDEAL_II_HAVE_AVX="$(usex cpu_flags_x86_avx)"
- -DDEAL_II_WITH_CUDA="$(usex cuda)"
- -DDEAL_II_HAVE_SSE2="$(usex cpu_flags_x86_sse2)"
- -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)"
- -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)"
- -DDEAL_II_WITH_GMSH="$(usex gmsh)"
- -DDEAL_II_WITH_GSL="$(usex gsl)"
- -DDEAL_II_WITH_HDF5="$(usex hdf5)"
- -DDEAL_II_WITH_LAPACK="$(usex lapack)"
- -DDEAL_II_WITH_METIS="$(usex metis)"
- -DDEAL_II_WITH_MPI="$(usex mpi)"
- -DDEAL_II_WITH_MUPARSER="$(usex muparser)"
- -DDEAL_II_WITH_NANOFLANN="$(usex nanoflann)"
- -DDEAL_II_WITH_NETCDF="$(usex netcdf)"
- -DOPENCASCADE_DIR="${CASROOT}"
- -DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)"
- -DDEAL_II_WITH_P4EST="$(usex p4est)"
- -DDEAL_II_WITH_PETSC="$(usex petsc)"
- -DDEAL_II_WITH_SCALAPACK="$(usex scalapack)"
- -DDEAL_II_WITH_SLEPC="$(usex slepc)"
- -DDEAL_II_WITH_SUNDIALS="$(usex sundials)"
- -DDEAL_II_WITH_SYMENGINE="$(usex symengine)"
- -DDEAL_II_WITH_UMFPACK="$(usex sparse)"
- -DBUILD_SHARED_LIBS="$(usex !static-libs)"
- -DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)"
- -DDEAL_II_WITH_THREADS="$(usex tbb)"
- -DDEAL_II_WITH_TRILINOS="$(usex trilinos)"
- )
- cmake-utils_src_configure
-}
-
-src_install() {
- if use doc && [[ ${PV} != *9999* ]]; then
- # copy missing images to the build directory:
- cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \
- "${BUILD_DIR}"/doc/doxygen/deal.II || die
- # replace links:
- sed -i \
- 's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \
- "${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed"
- fi
- cmake-utils_src_install
-
- # decompress the installed example sources:
- use examples && docompress -x /usr/share/doc/${PF}/examples
-}
diff --git a/sci-libs/dealii/metadata.xml b/sci-libs/dealii/metadata.xml
deleted file mode 100644
index 1820575b0..000000000
--- a/sci-libs/dealii/metadata.xml
+++ /dev/null
@@ -1,46 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>tamiko@gentoo.org</email>
- <name>Matthias Maier</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
-deal.II is a C++ program library targeted at the computational solution
-of partial differential equations using adaptive finite elements. It uses
-state-of-the-art programming techniques to offer you a modern interface
-to the complex data structures and algorithms required.
-</longdescription>
- <use>
- <flag name="adolc">Adds support for ADOL-C (<pkg>sci-libs/adolc</pkg>)</flag>
- <flag name="arpack">Adds support for ARPACK (<pkg>sci-libs/arpack</pkg>)</flag>
- <flag name="debug">
-Build an additional debug library with extra debug codepaths, like asserts
-and extra output. If you want to get meaningful backtraces see
-&lt;http://www.gentoo.org/proj/en/qa/backtraces.xml&gt;</flag>
- <flag name="c++11">Compile the library with -std=c++11</flag>
- <flag name="gmsh">Add support for gmsh (<pkg>sci-libs/gmsh</pkg>)</flag>
- <flag name="metis">Add support for metis (<pkg>sci-libs/metis</pkg>)</flag>
- <flag name="muparser">Add support for muparser (<pkg>dev-cpp/muParser</pkg>)</flag>
- <flag name="nanoflann">Adds support for nanoflann (<pkg>sci-libs/nanoflann</pkg>)</flag>
- <flag name="opencascade">Add support for opencascade (<pkg>sci-libs/opencascade</pkg>)</flag>
- <flag name="p4est">Add support for p4est (<pkg>sci-mathematics/p4est</pkg>)</flag>
- <flag name="petsc">Add support for petsc (<pkg>sci-mathematics/petsc</pkg>)</flag>
- <flag name="scalapack">Add support for ScaLAPACK (<pkg>sci-libs/scalapack</pkg>)</flag>
- <flag name="slepc">Add support for slepc (<pkg>sci-mathematics/slepc</pkg>)</flag>
- <flag name="sparse">Add support for suitesparse (<pkg>sci-libs/suitesparse</pkg>)</flag>
- <flag name="symengine">Add support for symengine (<pkg>sci-libs/symengine</pkg>)</flag>
- <flag name="tbb">Add threading support with the help of the tbb library (<pkg>dev-cpp/tbb</pkg>)</flag>
- <flag name="trilinos">Add support for trilinos (<pkg>sci-libs/trilinos</pkg>)</flag>
- <flag name="assimp">Add support for assimp (<pkg>media-libs/assimp</pkg>)</flag>
- <flag name="cuda">Add support for cuda assimp (<pkg>dev-util/nvidia-cuda-sdk</pkg>)</flag>
- <flag name="sundials">Add support for sundials assimp (<pkg>sci-libs/sundials</pkg>)</flag>
- </use>
- <upstream>
- <remote-id type="github">dealii/dealii</remote-id>
- </upstream>
-</pkgmetadata>