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authorJustin <jlec@gentoo.org>2014-12-26 10:38:14 +0100
committerJustin <jlec@gentoo.org>2014-12-26 10:38:14 +0100
commitafeb7087a59a7aeadd04ddcfd8c1d207673ce375 (patch)
tree3eba3cf6baae85e83ff268a8cc4fd5c30f4fa906 /sci-libs
parentMerge pull request #304 from yanlinlin82/master (diff)
parentdrop autotools-utils, empty DEPEND (diff)
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Merge pull request #303 from mschubert/biobambam
Add sci-biology/biobambam: a tool for bam file processing
Diffstat (limited to 'sci-libs')
-rw-r--r--sci-libs/libmaus/Manifest1
-rw-r--r--sci-libs/libmaus/libmaus-0.0.185.ebuild18
-rw-r--r--sci-libs/libmaus/metadata.xml14
3 files changed, 33 insertions, 0 deletions
diff --git a/sci-libs/libmaus/Manifest b/sci-libs/libmaus/Manifest
new file mode 100644
index 000000000..8ea3bdbfc
--- /dev/null
+++ b/sci-libs/libmaus/Manifest
@@ -0,0 +1 @@
+DIST 0.0.185-release-20141201090944.tar.gz 2492768 SHA256 791c0ee702de4a56fefbeb87b1bd401261e116591d2e625f5fc1556afb1e5c85 SHA512 574a690a271f975c31604d88daed68bce86d130fc63e9bc69e711457ec05fa74e4caf901e98df7a6a85776cd0dae16c347b79ba8aa9b556bb217819cc94d9d8e WHIRLPOOL dbf6ecba845410ebc8b17119bc834ff79116f6c2eb5c78d2c00b8c69c7f087c4503dc6c5f89b5b2c3c4d94fbfa11979faa3fdf75a7f49dec09badd38185c5d30
diff --git a/sci-libs/libmaus/libmaus-0.0.185.ebuild b/sci-libs/libmaus/libmaus-0.0.185.ebuild
new file mode 100644
index 000000000..b22196368
--- /dev/null
+++ b/sci-libs/libmaus/libmaus-0.0.185.ebuild
@@ -0,0 +1,18 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+FULLVER=${PV}-release-20141201090944
+
+DESCRIPTION="Library for biobambam"
+HOMEPAGE="https://github.com/gt1/libmaus"
+SRC_URI="https://github.com/gt1/libmaus/archive/${FULLVER}.tar.gz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~x86"
+IUSE=""
+
+S="${WORKDIR}"/${PN}-${FULLVER}
diff --git a/sci-libs/libmaus/metadata.xml b/sci-libs/libmaus/metadata.xml
new file mode 100644
index 000000000..72461eb47
--- /dev/null
+++ b/sci-libs/libmaus/metadata.xml
@@ -0,0 +1,14 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<herd>sci-biology</herd>
+<longdescription lang="en">
+libmaus is a collection of data structures and algorithms. It contains
+
+I/O classes (single byte and UTF-8)
+ bitio classes (input, output and various forms of bit level manipulation)
+ text indexing classes (suffix and LCP array, fulltext and minute (FM), ...)
+ BAM sequence alignment files input/output (simple and collating)
+ and many lower level support classes.
+</longdescription>
+</pkgmetadata>