diff options
| -rw-r--r-- | sci-biology/kat/kat-2.4.2.ebuild | 15 | ||||
| -rw-r--r-- | sci-biology/kat/kat-9999.ebuild | 15 |
2 files changed, 20 insertions, 10 deletions
diff --git a/sci-biology/kat/kat-2.4.2.ebuild b/sci-biology/kat/kat-2.4.2.ebuild index e8f10ad5d..39c4fc6c1 100644 --- a/sci-biology/kat/kat-2.4.2.ebuild +++ b/sci-biology/kat/kat-2.4.2.ebuild @@ -1,9 +1,10 @@ -# Copyright 1999-2018 Gentoo Foundation +# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=6 +EAPI=7 -PYTHON_COMPAT=( python3_{5,6} ) +PYTHON_COMPAT=( python3_{7,8,9} ) +DISTUTILS_USE_SETUPTOOLS=rdepend # https://github.com/Ensembl/Bio-DB-HTS/issues/30 inherit flag-o-matic autotools distutils-r1 @@ -23,9 +24,9 @@ CDEPEND=" dev-python/tabulate[${PYTHON_USEDEP}] dev-python/matplotlib[${PYTHON_USEDEP}] dev-python/numpy[${PYTHON_USEDEP}] - dev-python/scipy[${PYTHON_USEDEP}]" + dev-python/scipy[${PYTHON_USEDEP}] +" DEPEND="${CDEPEND} - dev-python/sphinx test? ( sys-process/time )" RDEPEND="${CDEPEND}" # contains bundled and *modified* version of jellyfish-2.2.0 @@ -40,6 +41,9 @@ PATCHES=( S="${WORKDIR}"/KAT-Release-"${PV}" +distutils_enable_sphinx "${S}/doc/source" --no-autodoc +distutils_enable_tests pytest + src_prepare(){ default rm -rf deps/boost || die "Failed to zap bundled boost" @@ -75,4 +79,5 @@ src_install(){ src_test(){ default + python_foreach_impl python_test } diff --git a/sci-biology/kat/kat-9999.ebuild b/sci-biology/kat/kat-9999.ebuild index 961dc9ce8..752dab83c 100644 --- a/sci-biology/kat/kat-9999.ebuild +++ b/sci-biology/kat/kat-9999.ebuild @@ -1,9 +1,10 @@ -# Copyright 1999-2018 Gentoo Foundation +# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=6 +EAPI=7 -PYTHON_COMPAT=( python3_{5,6} ) +PYTHON_COMPAT=( python3_{7,8,9} ) +DISTUTILS_USE_SETUPTOOLS=rdepend # https://github.com/Ensembl/Bio-DB-HTS/issues/30 inherit flag-o-matic autotools distutils-r1 git-r3 @@ -24,9 +25,9 @@ CDEPEND=" dev-python/tabulate[${PYTHON_USEDEP}] dev-python/matplotlib[${PYTHON_USEDEP}] dev-python/numpy[${PYTHON_USEDEP}] - dev-python/scipy[${PYTHON_USEDEP}]" + dev-python/scipy[${PYTHON_USEDEP}] +" DEPEND="${CDEPEND} - dev-python/sphinx test? ( sys-process/time )" RDEPEND="${CDEPEND}" # contains bundled and *modified* version of jellyfish-2.2.0 @@ -41,6 +42,9 @@ PATCHES=( S="${WORKDIR}"/KAT-Release-"${PV}" +distutils_enable_sphinx "${S}/doc/source" --no-autodoc +distutils_enable_tests pytest + src_prepare(){ default rm -rf deps/boost || die "Failed to zap bundled boost" @@ -76,4 +80,5 @@ src_install(){ src_test(){ default + python_foreach_impl python_test } |