diff options
| -rw-r--r-- | dev-python/pysparse/Manifest | 1 | ||||
| -rw-r--r-- | dev-python/pysparse/files/pysparse-1.1-setup.patch | 63 | ||||
| -rw-r--r-- | dev-python/pysparse/files/pysparse-1.1-superlu3.patch | 11 | ||||
| -rw-r--r-- | dev-python/pysparse/files/pysparse-1.1.1-setup.patch | 56 | ||||
| -rw-r--r-- | dev-python/pysparse/files/pysparse-1.1.1-superlu3.patch | 13 | ||||
| -rw-r--r-- | dev-python/pysparse/metadata.xml | 22 | ||||
| -rw-r--r-- | dev-python/pysparse/pysparse-1.1.1-r1.ebuild | 59 |
7 files changed, 0 insertions, 225 deletions
diff --git a/dev-python/pysparse/Manifest b/dev-python/pysparse/Manifest deleted file mode 100644 index 6e7e52ab0..000000000 --- a/dev-python/pysparse/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST pysparse-1.1.1.tar.gz 913261 SHA256 e02d248efedd051181a49f8aee487e576554a6c973578ca665d31947b35c3a4a SHA512 2e19b04257322ec5c7b45d42070f7fe35497a86c96387544c0938045b4be2ecf126b1a292882d8fccb444687232a6851b58f0b6596a064ab4ed4be32c3760585 WHIRLPOOL 6396626e24bdd96fe7f210f701c4671369f637765a28589aef833c4c3b3a5f06df6c7cbdde94967d419408767bf7c5723f27d9d74f0a99c4013ae28211cd0fc0 diff --git a/dev-python/pysparse/files/pysparse-1.1-setup.patch b/dev-python/pysparse/files/pysparse-1.1-setup.patch deleted file mode 100644 index 0d55feb79..000000000 --- a/dev-python/pysparse/files/pysparse-1.1-setup.patch +++ /dev/null @@ -1,63 +0,0 @@ ---- setup.py.orig 2010-05-11 19:32:35.000000000 +0100 -+++ setup.py 2010-05-11 19:32:49.000000000 +0100 -@@ -8,7 +8,7 @@ - - # default settings - library_dirs_list= [] --libraries_list = ['lapack', 'blas', 'g2c'] -+libraries_list = ['lapack', 'blas'] - superlu_defs = [('USE_VENDOR_BLAS',1)] - if sys.platform == 'win32': - superlu_defs += [('NO_TIMER', 1)] -@@ -18,40 +18,40 @@ - compily=[] - - # Specify whether to link against user's SuperLU library --use_users_superlu = False #True -+use_users_superlu = True - umfpack_defs = [('DINT', 1), ('NBLAS', 1)] # No BLAS. Ok if using your system's BLAS. - #umfpack_defs = [('DINT', 1), ('CBLAS', 1)] # with atlas c-blas (http://math-atlas.sf.net) - - if use_users_superlu: - # Specify location of include files -- superlu_include_dirs = ['/Users/dpo/local/linalg/SuperLU/SuperLU_3.1/SRC'] -+ superlu_include_dirs = ['/usr/include/superlu'] - # AND specify ONE of the following: - # 1) Location of source files (overrides linking with existing library) -- superlu_src_dir = '/Users/dpo/local/linalg/SuperLU/SuperLU_3.1/SRC' -+ superlu_src_dir = '' - # 2) Location of precompiled library - superlu_lib_dir = [''] -- superlu_libraries = [''] -+ superlu_libraries = ['superlu'] - - # Specify whether to link against user's UMFPACK library --use_users_umfpack = False #True -+use_users_umfpack = True - if use_users_umfpack: - # Specify location of include files -- umfpack_include_dirs = ['/Users/dpo/local/linalg/UMFPACK/UMFPACK/Include'] -+ umfpack_include_dirs = [''] - # AND specify ONE of the following: - # 1) Location of source files (overrides linking with existing library) -- umfpack_src_dir = '/Users/dpo/local/linalg/UMFPACK/UMFPACK/Source' -+ umfpack_src_dir = '' - # 2) Location of precompiled library - umfpack_lib_dir = [''] -- umfpack_libraries = [''] -+ umfpack_libraries = ['umfpack'] - - # Do the same for AMD -- amd_include_dirs = ['/Users/dpo/local/linalg/UMFPACK/AMD/Include'] -+ amd_include_dirs = [''] - # AND specify ONE of the following: - # 1) Location of source files (overrides linking with existing library) -- amd_src_dir = '/Users/dpo/local/linalg/UMFPACK/AMD/Source' -+ amd_src_dir = '' - # 2) Location of precompiled library - amd_lib_dir = [''] -- amd_libraries = [''] -+ amd_libraries = ['amd'] - - else: - umfpack_libraries = [] diff --git a/dev-python/pysparse/files/pysparse-1.1-superlu3.patch b/dev-python/pysparse/files/pysparse-1.1-superlu3.patch deleted file mode 100644 index 8b751fae6..000000000 --- a/dev-python/pysparse/files/pysparse-1.1-superlu3.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- Src/superlu3module.c.orig 2010-05-11 19:22:02.000000000 +0100 -+++ Src/superlu3module.c 2010-05-11 19:17:02.000000000 +0100 -@@ -267,7 +267,7 @@ - //printf("Factorizing with drop_tol = %g\n", drop_tol); - /* Perform factorization (perm_c and perm_r are swapped because our matrix - * is stored in compressed-row format and not in compressed-column format! */ -- dgstrf(&self->options, &AC, drop_tol, relax, panel_size, -+ dgstrf(&self->options, &AC, relax, panel_size, - etree, NULL, 0, self->perm_c, self->perm_r, - &self->L, &self->U, &self->stat, &info); - diff --git a/dev-python/pysparse/files/pysparse-1.1.1-setup.patch b/dev-python/pysparse/files/pysparse-1.1.1-setup.patch deleted file mode 100644 index 3d944a3ec..000000000 --- a/dev-python/pysparse/files/pysparse-1.1.1-setup.patch +++ /dev/null @@ -1,56 +0,0 @@ -diff --git a/setup.py b/setup.py -index 1b1ee1d..cdb9ddf 100644 ---- a/setup.py -+++ b/setup.py -@@ -19,40 +19,40 @@ linky=[] - compily=[] - - # Specify whether to link against user's SuperLU library --use_users_superlu = False #True -+use_users_superlu = True - umfpack_defs = [('DINT', 1), ('NBLAS', 1)] # No BLAS. Ok if using your system's BLAS. - #umfpack_defs = [('DINT', 1), ('CBLAS', 1)] # with atlas c-blas (http://math-atlas.sf.net) - - if use_users_superlu: - # Specify location of include files -- superlu_include_dirs = ['/Users/dpo/local/linalg/SuperLU/SuperLU_3.1/SRC'] -+ superlu_include_dirs = ['/usr/include/superlu'] - # AND specify ONE of the following: - # 1) Location of source files (overrides linking with existing library) -- superlu_src_dir = '/Users/dpo/local/linalg/SuperLU/SuperLU_3.1/SRC' -+ superlu_src_dir = '' - # 2) Location of precompiled library - superlu_lib_dir = [''] -- superlu_libraries = [''] -+ superlu_libraries = ['superlu'] - - # Specify whether to link against user's UMFPACK library --use_users_umfpack = False #True -+use_users_umfpack = True - if use_users_umfpack: - # Specify location of include files -- umfpack_include_dirs = ['/Users/dpo/local/linalg/UMFPACK/UMFPACK/Include'] -+ umfpack_include_dirs = [''] - # AND specify ONE of the following: - # 1) Location of source files (overrides linking with existing library) -- umfpack_src_dir = '/Users/dpo/local/linalg/UMFPACK/UMFPACK/Source' -+ umfpack_src_dir = '' - # 2) Location of precompiled library - umfpack_lib_dir = [''] -- umfpack_libraries = [''] -+ umfpack_libraries = ['umfpack'] - - # Do the same for AMD -- amd_include_dirs = ['/Users/dpo/local/linalg/UMFPACK/AMD/Include'] -+ amd_include_dirs = [''] - # AND specify ONE of the following: - # 1) Location of source files (overrides linking with existing library) -- amd_src_dir = '/Users/dpo/local/linalg/UMFPACK/AMD/Source' -+ amd_src_dir = '' - # 2) Location of precompiled library - amd_lib_dir = [''] -- amd_libraries = [''] -+ amd_libraries = ['amd'] - - else: - umfpack_libraries = [] diff --git a/dev-python/pysparse/files/pysparse-1.1.1-superlu3.patch b/dev-python/pysparse/files/pysparse-1.1.1-superlu3.patch deleted file mode 100644 index fa01d7388..000000000 --- a/dev-python/pysparse/files/pysparse-1.1.1-superlu3.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/Src/superlu3module.c b/Src/superlu3module.c -index 810191b..a74edfb 100644 ---- a/Src/superlu3module.c -+++ b/Src/superlu3module.c -@@ -267,7 +267,7 @@ static PyObject *newSuperLUObject(int n, CSRMatObject *matrix, PyObject *issym, - //printf("Factorizing with drop_tol = %g\n", drop_tol); - /* Perform factorization (perm_c and perm_r are swapped because our matrix - * is stored in compressed-row format and not in compressed-column format! */ -- dgstrf(&self->options, &AC, drop_tol, relax, panel_size, -+ dgstrf(&self->options, &AC, relax, panel_size, - etree, NULL, 0, self->perm_c, self->perm_r, - &self->L, &self->U, &self->stat, &info); - diff --git a/dev-python/pysparse/metadata.xml b/dev-python/pysparse/metadata.xml deleted file mode 100644 index 50412f44e..000000000 --- a/dev-python/pysparse/metadata.xml +++ /dev/null @@ -1,22 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> - This provides a set of sparse matrix types for Python, with modules - which implement: - - Iterative methods for solving linear systems of equations - - A set of standard preconditioners - - An interface to a direct solver for sparse linear systems of equations - - The JDSYM eigensolver. - All of these modules are implemented as C extension modules based on - standard sparse and dense matrix libraries (UMFPACK/AMD, SuperLU, - BLAS/LAPACK) for maximum performance and robustness. -</longdescription> - <upstream> - <remote-id type="sourceforge">pysparse</remote-id> - </upstream> -</pkgmetadata> diff --git a/dev-python/pysparse/pysparse-1.1.1-r1.ebuild b/dev-python/pysparse/pysparse-1.1.1-r1.ebuild deleted file mode 100644 index 2f946170d..000000000 --- a/dev-python/pysparse/pysparse-1.1.1-r1.ebuild +++ /dev/null @@ -1,59 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit distutils-r1 multilib - -DESCRIPTION="Sparse linear algebra extension for Python" -SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" -HOMEPAGE="http://pysparse.sourceforge.net/" - -IUSE="doc examples" -SLOT="0" -KEYWORDS="~amd64 ~x86" -LICENSE="BSD" - -RDEPEND=" - dev-python/numpy - sci-libs/superlu - <=sci-libs/umfpack-5.4.0" -DEPEND="${DEPEND}" - -PATCHES=( - "${FILESDIR}"/${P}-setup.patch - "${FILESDIR}"/${P}-superlu3.patch - ) - -pc_libs() { - $(tc-getPKG_CONFIG) --libs-only-l $@ | \ - sed -e 's/[ ]-l*\(pthread\|m\)[ ]*//g' \ - -e 's/^-l/"/' -e 's/[ ]*-l/","/g' -e 's/[ ]*$/"/g' -} - -python_prepare_all() { - distutils-r1_python_prepare_all - sed \ - -e "/libraries_list/s:'lapack', 'blas':$(pc_libs blas lapack):g" \ - -e "/use_users_umfpack/s:True:False:g" \ - -i setup.py || die -} - -python_test() { - for t in Test/test{Umfpack,Superlu}.py; do - ${PYTHON} ${t} || die - done -} - -python_install_all() { - distutils-r1_python_install - - use doc && dodoc Doc/*.pdf - - if use examples; then - insinto /usr/share/${PN}/ - doins -r Examples - fi -} |