diff options
| -rw-r--r-- | sci-biology/samri/samri-0.5.ebuild | 21 |
1 files changed, 10 insertions, 11 deletions
diff --git a/sci-biology/samri/samri-0.5.ebuild b/sci-biology/samri/samri-0.5.ebuild index 84161f65f..1633aa23f 100644 --- a/sci-biology/samri/samri-0.5.ebuild +++ b/sci-biology/samri/samri-0.5.ebuild @@ -1,25 +1,25 @@ -# Copyright 1999-2021 Gentoo Authors +# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=7 -PYTHON_COMPAT=( python3_{7..8} ) +PYTHON_COMPAT=( python3_{8..9} ) inherit distutils-r1 prefix DESCRIPTION="Small Animal Magnetic Resonance Imaging" HOMEPAGE="https://github.com/IBT-FMI/SAMRI" SRC_URI="https://github.com/IBT-FMI/SAMRI/archive/${PV}.tar.gz -> ${P}.tar.gz" +S="${WORKDIR}/SAMRI-${PV}" LICENSE="GPL-3" SLOT="0" -IUSE="+atlases labbookdb test" KEYWORDS="~amd64" -RESTRICT="!test? ( test )" +IUSE="+atlases labbookdb" +REQUIRED_USE="test? ( atlases )" DEPEND=" test? ( - dev-python/pytest[${PYTHON_USEDEP}] sci-biology/samri_bidsdata sci-biology/samri_bindata ) @@ -48,14 +48,13 @@ RDEPEND=" sci-biology/nilearn[${PYTHON_USEDEP}] " -REQUIRED_USE="test? ( atlases )" - -S="${WORKDIR}/SAMRI-${PV}" +distutils_enable_tests pytest +distutils_enable_sphinx doc/source dev-python/sphinxcontrib-napoleon src_prepare() { distutils-r1_src_prepare - sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI \'/usr/ samri` - sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI /usr/ test_scripts.sh` + sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI \'/usr/ samri` || die + sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI /usr/ test_scripts.sh` || die eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX samri/* test_scripts.sh) } @@ -68,5 +67,5 @@ python_test() { sed -i -e \ "/def test_bru2bids():/i@pytest.mark.skip('Removed in full test suite, as this is already tested in `test_scripts.sh`')" \ samri/pipelines/tests/test_repos.py || die - pytest -vv -k "not longtime" || die + epytest -k "not longtime" } |