diff options
303 files changed, 1590 insertions, 1590 deletions
diff --git a/app-doc/blacs-docs/metadata.xml b/app-doc/blacs-docs/metadata.xml index b479760c1..165882922 100644 --- a/app-doc/blacs-docs/metadata.xml +++ b/app-doc/blacs-docs/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The BLACS (Basic Linear Algebra Communication Subprograms) project - is an ongoing investigation whose purpose is to create a linear - algebra oriented message passing interface that may be implemented - efficiently and uniformly across a large range of distributed memory - platforms. - This package contains manual pages for the routines, and other - quick reference in postscript format. +The BLACS (Basic Linear Algebra Communication Subprograms) project +is an ongoing investigation whose purpose is to create a linear +algebra oriented message passing interface that may be implemented +efficiently and uniformly across a large range of distributed memory +platforms. +This package contains manual pages for the routines, and other +quick reference in postscript format. </longdescription> </pkgmetadata> diff --git a/app-doc/blas-docs/metadata.xml b/app-doc/blas-docs/metadata.xml index 636c418b6..dfb4275fa 100644 --- a/app-doc/blas-docs/metadata.xml +++ b/app-doc/blas-docs/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines - for most of the basic vector and matrix operations. They are widely - used as the basis for other high quality linear algebra software, for - example lapack and linpack. This implementation is the Fortran 77 - reference implementation found at netlib. - This package contains manual pages for the routines, and other - quick reference in postscript format. +BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines +for most of the basic vector and matrix operations. They are widely +used as the basis for other high quality linear algebra software, for +example lapack and linpack. This implementation is the Fortran 77 +reference implementation found at netlib. +This package contains manual pages for the routines, and other +quick reference in postscript format. </longdescription> </pkgmetadata> diff --git a/app-doc/lapack-docs/metadata.xml b/app-doc/lapack-docs/metadata.xml index a47b5e46a..19cefda24 100644 --- a/app-doc/lapack-docs/metadata.xml +++ b/app-doc/lapack-docs/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - LAPACK is a comprehensive FORTRAN library that does linear - algebra operations including matrix inversions, least squared - solutions to linear sets of equations, eigenvector analysis, singular - value decomposition, etc. It is a very comprehensive and reputable - package that has found extensive use in the scientific community. - This package contains manual pages for the routines, and a Quick-Reference guide. +LAPACK is a comprehensive FORTRAN library that does linear +algebra operations including matrix inversions, least squared +solutions to linear sets of equations, eigenvector analysis, singular +value decomposition, etc. It is a very comprehensive and reputable +package that has found extensive use in the scientific community. +This package contains manual pages for the routines, and a Quick-Reference guide. </longdescription> </pkgmetadata> diff --git a/app-doc/root-docs/metadata.xml b/app-doc/root-docs/metadata.xml index 117b7b34c..119d0b2ba 100644 --- a/app-doc/root-docs/metadata.xml +++ b/app-doc/root-docs/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - This package contains the automatically generated ROOT class - documentation. - </longdescription> +This package contains the automatically generated ROOT class +documentation. +</longdescription> <use> <flag name="api">Generate html API documentation</flag> <flag name="http">Build HttpServer documentation</flag> diff --git a/app-doc/scalapack-docs/metadata.xml b/app-doc/scalapack-docs/metadata.xml index 8c025bc6d..f404a1788 100644 --- a/app-doc/scalapack-docs/metadata.xml +++ b/app-doc/scalapack-docs/metadata.xml @@ -6,13 +6,13 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The ScaLAPACK (or Scalable LAPACK) library includes a subset of - LAPACK routines redesigned for distributed memory MIMD parallel - computers. It is currently written in a Single-Program-Multiple-Data - style using explicit message passing for interprocessor - communication. It assumes matrices are laid out in a two-dimensional - block cyclic decomposition. - This package contains manual pages for the routines, and quick - reference guides. +The ScaLAPACK (or Scalable LAPACK) library includes a subset of +LAPACK routines redesigned for distributed memory MIMD parallel +computers. It is currently written in a Single-Program-Multiple-Data +style using explicit message passing for interprocessor +communication. It assumes matrices are laid out in a two-dimensional +block cyclic decomposition. +This package contains manual pages for the routines, and quick +reference guides. </longdescription> </pkgmetadata> diff --git a/app-portage/g-octave/metadata.xml b/app-portage/g-octave/metadata.xml index 0f04e0b21..2388656e8 100644 --- a/app-portage/g-octave/metadata.xml +++ b/app-portage/g-octave/metadata.xml @@ -6,11 +6,11 @@ <name>Rafael Goncalves Martins</name> </maintainer> <longdescription lang="en"> - g-octave is a tool that generates and installs ebuilds for Octave-Forge - packages "on-the-fly" to Gentoo Linux, using Portage. It's capable to - generate ebuilds and Manifest files for the packages, and to install - them using an autogenerated overlay (named g-octave). g-octave can also - handle patches to the packages automatically. The command line interface - tries to be very similar to the interface of the emerge tool. - </longdescription> +g-octave is a tool that generates and installs ebuilds for Octave-Forge +packages "on-the-fly" to Gentoo Linux, using Portage. It's capable to +generate ebuilds and Manifest files for the packages, and to install +them using an autogenerated overlay (named g-octave). g-octave can also +handle patches to the packages automatically. The command line interface +tries to be very similar to the interface of the emerge tool. +</longdescription> </pkgmetadata> diff --git a/app-vim/vim-gromacs/metadata.xml b/app-vim/vim-gromacs/metadata.xml index b0b58dd8d..c8a25c291 100644 --- a/app-vim/vim-gromacs/metadata.xml +++ b/app-vim/vim-gromacs/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription lang="en"> - VIM syntax plugin which provides syntax highlighting for the gromacs files. - </longdescription> +VIM syntax plugin which provides syntax highlighting for the gromacs files. +</longdescription> <upstream> <remote-id type="github">HubLot/vim-gromacs</remote-id> </upstream> diff --git a/dev-cpp/eigen/metadata.xml b/dev-cpp/eigen/metadata.xml index b4b6e1b4d..ed850b49c 100644 --- a/dev-cpp/eigen/metadata.xml +++ b/dev-cpp/eigen/metadata.xml @@ -6,27 +6,27 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Eigen is a lightweight C++ template library for vector and matrix math, - a.k.a. linear algebra. Unlike most other linear algebra libraries, Eigen - focuses on the simple mathematical needs of applications: games and other - OpenGL apps, spreadsheets and other office apps, etc. Eigen is dedicated to - providing optimal speed with GCC. - </longdescription> +Eigen is a lightweight C++ template library for vector and matrix math, +a.k.a. linear algebra. Unlike most other linear algebra libraries, Eigen +focuses on the simple mathematical needs of applications: games and other +OpenGL apps, spreadsheets and other office apps, etc. Eigen is dedicated to +providing optimal speed with GCC. +</longdescription> <use> <flag name="adolc"> - Enable automatic differentiation using <pkg>sci-libs/adolc</pkg> - </flag> +Enable automatic differentiation using <pkg>sci-libs/adolc</pkg> +</flag> <flag name="metis"> - Enable matrix partitioning using <pkg>sci-libs/metis</pkg></flag> +Enable matrix partitioning using <pkg>sci-libs/metis</pkg></flag> <flag name="mkl"> - Use propertary intel blas/lapack implementation through <pkg>sci-libs/mkl</pkg> - </flag> +Use propertary intel blas/lapack implementation through <pkg>sci-libs/mkl</pkg> +</flag> <flag name="pastix"> - Enable large scale direct solver with using <pkg>sci-libs/pastix</pkg> - </flag> +Enable large scale direct solver with using <pkg>sci-libs/pastix</pkg> +</flag> <flag name="sparse"> - Enable use for extra sparse matrix with <pkg>sci-libs/umfpack</pkg>, <pkg>sci-libs/cholmod</pkg>, <pkg>sci-libs/superlu</pkg> and <pkg>dev-cpp/sparsehash</pkg> - </flag> +Enable use for extra sparse matrix with <pkg>sci-libs/umfpack</pkg>, <pkg>sci-libs/cholmod</pkg>, <pkg>sci-libs/superlu</pkg> and <pkg>dev-cpp/sparsehash</pkg> +</flag> </use> <upstream> <remote-id type="bitbucket">eigen/eigen</remote-id> diff --git a/dev-cpp/growler-core/metadata.xml b/dev-cpp/growler-core/metadata.xml index b33ec1a13..f4b35821b 100644 --- a/dev-cpp/growler-core/metadata.xml +++ b/dev-cpp/growler-core/metadata.xml @@ -6,8 +6,8 @@ <name>Bryan Green</name> </maintainer> <longdescription> - Growler-Core provides a large set of mainly general-purpose classes and - functionality for developing and using the Growler Distributed Component - Architecture. - </longdescription> +Growler-Core provides a large set of mainly general-purpose classes and +functionality for developing and using the Growler Distributed Component +Architecture. +</longdescription> </pkgmetadata> diff --git a/dev-cpp/growler-link/metadata.xml b/dev-cpp/growler-link/metadata.xml index 64aa8eb6a..82a8bc1f0 100644 --- a/dev-cpp/growler-link/metadata.xml +++ b/dev-cpp/growler-link/metadata.xml @@ -6,8 +6,8 @@ <name>Bryan Green</name> </maintainer> <longdescription> - Growler-Link is the lowest-level Growler package. It provides basic support for - dynamic linking, components and modules, as well as several other of Growler's - commonly used API's, such as Clogger. - </longdescription> +Growler-Link is the lowest-level Growler package. It provides basic support for +dynamic linking, components and modules, as well as several other of Growler's +commonly used API's, such as Clogger. +</longdescription> </pkgmetadata> diff --git a/dev-cpp/growler-thread/metadata.xml b/dev-cpp/growler-thread/metadata.xml index 5800a84ea..16f9b1a83 100644 --- a/dev-cpp/growler-thread/metadata.xml +++ b/dev-cpp/growler-thread/metadata.xml @@ -6,7 +6,7 @@ <name>Bryan Green</name> </maintainer> <longdescription> - Growler-Thread is a pthread wrapper library used by Growler. It provides - support for creating threads, and for common multithreading tasks - </longdescription> +Growler-Thread is a pthread wrapper library used by Growler. It provides +support for creating threads, and for common multithreading tasks +</longdescription> </pkgmetadata> diff --git a/dev-java/fits/metadata.xml b/dev-java/fits/metadata.xml index 0b1cc63ad..2ea51839a 100644 --- a/dev-java/fits/metadata.xml +++ b/dev-java/fits/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Java library which provides I/O for FITS images and binary tables. The Java - libraries support all basic FITS formats and gzip compressed - files. Support for access to data subsets is included and the - HIERARCH convention may be used. +Java library which provides I/O for FITS images and binary tables. The Java +libraries support all basic FITS formats and gzip compressed +files. Support for access to data subsets is included and the +HIERARCH convention may be used. </longdescription> </pkgmetadata> diff --git a/dev-java/flexdock/metadata.xml b/dev-java/flexdock/metadata.xml index 6d57dc37c..11085ca1f 100644 --- a/dev-java/flexdock/metadata.xml +++ b/dev-java/flexdock/metadata.xml @@ -6,6 +6,6 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Java docking framework for use in cross-platform Swing applications. +Java docking framework for use in cross-platform Swing applications. </longdescription> </pkgmetadata> diff --git a/dev-java/gluegen/metadata.xml b/dev-java/gluegen/metadata.xml index df54bab01..b81144d5f 100644 --- a/dev-java/gluegen/metadata.xml +++ b/dev-java/gluegen/metadata.xml @@ -15,7 +15,7 @@ generates interfaces. It has the ability to perform significant transformations on the IR before glue code emission. GlueGen is currently powerful enough to bind even low-level APIs such as the Java Native Interface (JNI) and the AWT Native Interface (JAWT) back up to the Java programming language. - </longdescription> +</longdescription> <upstream> <remote-id type="github">sgothel/gluegen</remote-id> </upstream> diff --git a/dev-java/hdf-java/metadata.xml b/dev-java/hdf-java/metadata.xml index 531e47258..2a2dedfa2 100644 --- a/dev-java/hdf-java/metadata.xml +++ b/dev-java/hdf-java/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - HDF is a versatile data model that can represent very complex data - objects and a wide variety of metadata. It is a completely portable - file format with no limit on the number or size of data objects in - the collection. - This Java package implements HDF4/HDF5 data objects in an object-oriented - form. It provides a common Java API for accessing HDF files. +HDF is a versatile data model that can represent very complex data +objects and a wide variety of metadata. It is a completely portable +file format with no limit on the number or size of data objects in +the collection. +This Java package implements HDF4/HDF5 data objects in an object-oriented +form. It provides a common Java API for accessing HDF files. </longdescription> <use> <flag name="hdf">Add support for the Hierarchical Data Format v.4 (<pkg>sci-libs/hdf</pkg>)</flag> diff --git a/dev-java/jeuclid-core/metadata.xml b/dev-java/jeuclid-core/metadata.xml index 78b3a367d..8b5c039f5 100644 --- a/dev-java/jeuclid-core/metadata.xml +++ b/dev-java/jeuclid-core/metadata.xml @@ -6,15 +6,15 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - JEuclid is a complete MathML rendering solution, consisting of: - * A MathViewer application - * Command line converters from MathML to other formats - * An ant task for automated conversion - * Display components for AWT and Swing - * A component for Apache Cocoon - This package contains the basic JEuclid rendering and document - handling classes. - </longdescription> +JEuclid is a complete MathML rendering solution, consisting of: +* A MathViewer application +* Command line converters from MathML to other formats +* An ant task for automated conversion +* Display components for AWT and Swing +* A component for Apache Cocoon +This package contains the basic JEuclid rendering and document +handling classes. +</longdescription> <upstream> <remote-id type="sourceforge">jeuclid</remote-id> </upstream> diff --git a/dev-java/jgraphx/metadata.xml b/dev-java/jgraphx/metadata.xml index 49aa77f7c..2a4062ae5 100644 --- a/dev-java/jgraphx/metadata.xml +++ b/dev-java/jgraphx/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - JGraph X is based on the mxGraph architecture, a re-designed core - based on JGraph experience. - Overall, JGraph X provides more features that JGraph, with a far - smaller code size and complexity. Redesigning the codebase from - scratch now means implementing common feature extensions are easier - and require less coding. A number of new loosely coupled - application-centric features have been added, making prototyping - even faster, without their usage restricting application - flexibility. +JGraph X is based on the mxGraph architecture, a re-designed core +based on JGraph experience. +Overall, JGraph X provides more features that JGraph, with a far +smaller code size and complexity. Redesigning the codebase from +scratch now means implementing common feature extensions are easier +and require less coding. A number of new loosely coupled +application-centric features have been added, making prototyping +even faster, without their usage restricting application +flexibility. </longdescription> </pkgmetadata> diff --git a/dev-java/jlatexmath-fop/metadata.xml b/dev-java/jlatexmath-fop/metadata.xml index cc9ca869b..9ded36c47 100644 --- a/dev-java/jlatexmath-fop/metadata.xml +++ b/dev-java/jlatexmath-fop/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - LaTeXmath library provides a set of Java classes for displaying - (complex) mathematical formulas as part of a Java application with - LateX style. This package installs the plugin for dev-java/fop. +LaTeXmath library provides a set of Java classes for displaying +(complex) mathematical formulas as part of a Java application with +LateX style. This package installs the plugin for dev-java/fop. </longdescription> </pkgmetadata> diff --git a/dev-java/jlatexmath/metadata.xml b/dev-java/jlatexmath/metadata.xml index 62952f06f..7ad985657 100644 --- a/dev-java/jlatexmath/metadata.xml +++ b/dev-java/jlatexmath/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - LaTeXmath library provides a set of Java classes for displaying - (complex) mathematical formulas as part of a Java application with - LateX style. +LaTeXmath library provides a set of Java classes for displaying +(complex) mathematical formulas as part of a Java application with +LateX style. </longdescription> </pkgmetadata> diff --git a/dev-java/jogl/metadata.xml b/dev-java/jogl/metadata.xml index 7a5a6ccdd..7751e096e 100644 --- a/dev-java/jogl/metadata.xml +++ b/dev-java/jogl/metadata.xml @@ -8,7 +8,7 @@ <longdescription lang="en"> JOGL provides Java with a Binding for the OpenGL® API (JSR-231), and is designed to provide hardware-supported 3D graphics to applications written in Java. - </longdescription> +</longdescription> <use> <flag name="cg">Enable NVidia Cg binding.</flag> </use> diff --git a/dev-java/netcdf/metadata.xml b/dev-java/netcdf/metadata.xml index c49e4ad8f..15eb5729e 100644 --- a/dev-java/netcdf/metadata.xml +++ b/dev-java/netcdf/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The NetCDF-Java Library is a Java interface to NetCDF files, - as well as to many other types of scientific data formats. +The NetCDF-Java Library is a Java interface to NetCDF files, +as well as to many other types of scientific data formats. </longdescription> </pkgmetadata> diff --git a/dev-java/scirenderer/metadata.xml b/dev-java/scirenderer/metadata.xml index c554751ce..18259a6ca 100644 --- a/dev-java/scirenderer/metadata.xml +++ b/dev-java/scirenderer/metadata.xml @@ -6,6 +6,6 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - A rendering library for scilab based on JoGL - </longdescription> +A rendering library for scilab based on JoGL +</longdescription> </pkgmetadata> diff --git a/dev-lang/berkeley_upc/metadata.xml b/dev-lang/berkeley_upc/metadata.xml index c4275da80..f0b023ca4 100644 --- a/dev-lang/berkeley_upc/metadata.xml +++ b/dev-lang/berkeley_upc/metadata.xml @@ -9,13 +9,13 @@ <flag name="mpi-compat">Enable interoperability with MPI</flag> <flag name="pshm">Build UPC Runtime/GASNet with Process-SHared Memory enabled</flag> <flag name="segment-fast"> - Select GASNet's FAST segments (default), for the fastest remote access with a possible - cost in max shared memory size - </flag> +Select GASNet's FAST segments (default), for the fastest remote access with a possible +cost in max shared memory size +</flag> <flag name="segment-large"> - Select GASNet's LARGE segments, for the largest possible shared memory size, at a - possible cost in remote access time - </flag> +Select GASNet's LARGE segments, for the largest possible shared memory size, at a +possible cost in remote access time +</flag> <flag name="single">Support running over smp loopback (no network)</flag> <flag name="sptr-packed">Use the more efficient 'packed' shared pointer representation</flag> <flag name="sptr-struct">Use the 'struct' shared pointer representation</flag> diff --git a/dev-lang/icc/metadata.xml b/dev-lang/icc/metadata.xml index 7731f2960..7c4d1a96d 100644 --- a/dev-lang/icc/metadata.xml +++ b/dev-lang/icc/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Intel® C++ Compiler is a full featured C/C++ compiler for Intel - based architectures. The compiler supports multi-threading, automatic - processor dispatch, vectorization, auto-parallelization, OpenMP, data - prefetching, loop unrolling. The package comes with extensive - documentation. The product can be installed as a non-commercial as - well. License, terms of qualifications can be found on the web site. +The Intel® C++ Compiler is a full featured C/C++ compiler for Intel +based architectures. The compiler supports multi-threading, automatic +processor dispatch, vectorization, auto-parallelization, OpenMP, data +prefetching, loop unrolling. The package comes with extensive +documentation. The product can be installed as a non-commercial as +well. License, terms of qualifications can be found on the web site. </longdescription> </pkgmetadata> diff --git a/dev-lang/idb/metadata.xml b/dev-lang/idb/metadata.xml index 8bb408f0d..878e55ad2 100644 --- a/dev-lang/idb/metadata.xml +++ b/dev-lang/idb/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Intel® Debugger is a command line debugger for Intel based - architectures. It is well suited with the Intel C++ or Intel FORTRAN - compilers. It also comes also with a graphical interface and extensive - documentation. The package is bundled in either compiler tar ball, and - has been split to produce this one. - The product can be installed as a non-commercial as - well. License, terms of qualifications can be found on the web - site and follow the one received in the Intel compilers. +The Intel® Debugger is a command line debugger for Intel based +architectures. It is well suited with the Intel C++ or Intel FORTRAN +compilers. It also comes also with a graphical interface and extensive +documentation. The package is bundled in either compiler tar ball, and +has been split to produce this one. +The product can be installed as a non-commercial as +well. License, terms of qualifications can be found on the web +site and follow the one received in the Intel compilers. </longdescription> <use> <flag name="eclipse">Install the <pkg>dev-util/eclipse-sdk</pkg> plugins</flag> diff --git a/dev-lang/ifc/metadata.xml b/dev-lang/ifc/metadata.xml index a2754dff2..0cc12d890 100644 --- a/dev-lang/ifc/metadata.xml +++ b/dev-lang/ifc/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Intel® Fortran Compiler is a full featured FORTRAN 77/95 and - substantial FORTRAN 2003 compiler for Intel based architectures. The - compiler supports multi-threading with automatic processor dispatch, - vectorization, auto-parallelization, OpenMP, data prefetching, loop - unrolling. The package comes with extensive documentation. - The product can be installed as a non-commercial as well. License, - terms of qualifications can be found on the web site. - </longdescription> +The Intel® Fortran Compiler is a full featured FORTRAN 77/95 and +substantial FORTRAN 2003 compiler for Intel based architectures. The +compiler supports multi-threading with automatic processor dispatch, +vectorization, auto-parallelization, OpenMP, data prefetching, loop +unrolling. The package comes with extensive documentation. +The product can be installed as a non-commercial as well. License, +terms of qualifications can be found on the web site. +</longdescription> </pkgmetadata> diff --git a/dev-lang/path64/metadata.xml b/dev-lang/path64/metadata.xml index 03dc1bf82..b0cec0934 100644 --- a/dev-lang/path64/metadata.xml +++ b/dev-lang/path64/metadata.xml @@ -6,11 +6,11 @@ <name>Kacper Kowalik</name> </maintainer> <longdescription> - The PathScale EKOPath Compiler Suite offers programmers a rich set of tools and - one of the world's most sophisticated optimization infrastructures to maximize - program performance on any Intel 64 or AMD64 platform supporting Intel MMX, - SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2, AMD SSE4A and AVX. - </longdescription> +The PathScale EKOPath Compiler Suite offers programmers a rich set of tools and +one of the world's most sophisticated optimization infrastructures to maximize +program performance on any Intel 64 or AMD64 platform supporting Intel MMX, +SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2, AMD SSE4A and AVX. +</longdescription> <use> <flag name="debugger">Build PathDB debugger</flag> <flag name="assembler">Build PathAS assembler</flag> diff --git a/dev-lang/pgi/metadata.xml b/dev-lang/pgi/metadata.xml index 785285df0..c6b14e0fd 100644 --- a/dev-lang/pgi/metadata.xml +++ b/dev-lang/pgi/metadata.xml @@ -2,8 +2,8 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription> - PGI is the C/C++/Fortran compiler suite of the Portland Group. - </longdescription> +PGI is the C/C++/Fortran compiler suite of the Portland Group. +</longdescription> <maintainer type="person"> <email>gentryx@gmx.de</email> </maintainer> diff --git a/dev-libs/asmjit/metadata.xml b/dev-libs/asmjit/metadata.xml index be3086e71..a1c96691e 100644 --- a/dev-libs/asmjit/metadata.xml +++ b/dev-libs/asmjit/metadata.xml @@ -10,15 +10,15 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - AsmJit is complete x86/x64 JIT-Assembler for C++ language. It supports - 32/64-bit x86 processors including all usable extensions (FPU, MMX, - 3dNow, SSE, SSE2, SSE3 and SSE4) through type-safe API that mimics Intel - assembler syntax and eliminates nearly all common mistakes that can be - done by developers. +AsmJit is complete x86/x64 JIT-Assembler for C++ language. It supports +32/64-bit x86 processors including all usable extensions (FPU, MMX, +3dNow, SSE, SSE2, SSE3 and SSE4) through type-safe API that mimics Intel +assembler syntax and eliminates nearly all common mistakes that can be +done by developers. - AsmJit contains also high-level code generation classes that can be used - as a portable way to create JIT code that should run on all supported - architectures. High-level classes can handle various function - calling-conventions, register allocation and 32/64-bit mode differences. - </longdescription> +AsmJit contains also high-level code generation classes that can be used +as a portable way to create JIT code that should run on all supported +architectures. High-level classes can handle various function +calling-conventions, register allocation and 32/64-bit mode differences. +</longdescription> </pkgmetadata> diff --git a/dev-libs/boost-compute/metadata.xml b/dev-libs/boost-compute/metadata.xml index 23fa5aae7..f41b18fa7 100644 --- a/dev-libs/boost-compute/metadata.xml +++ b/dev-libs/boost-compute/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Boost.Compute is a GPU/parallel-computing library for C++ based on - OpenCL. The core library is a thin C++ wrapper over the OpenCL API - and provides access to compute devices, contexts, command queues - and memory buffers. - </longdescription> +Boost.Compute is a GPU/parallel-computing library for C++ based on +OpenCL. The core library is a thin C++ wrapper over the OpenCL API +and provides access to compute devices, contexts, command queues +and memory buffers. +</longdescription> <upstream> <remote-id type="github">boostorg/compute</remote-id> </upstream> diff --git a/dev-libs/fortrancl/metadata.xml b/dev-libs/fortrancl/metadata.xml index 1543d123c..3222dfcfc 100644 --- a/dev-libs/fortrancl/metadata.xml +++ b/dev-libs/fortrancl/metadata.xml @@ -10,14 +10,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - FortranCL is an OpenCL interface for Fortran 90. It allows programmers to call - the OpenCL parallel programming framework directly from Fortran, so developers - can accelerate their Fortran code using graphical processing units (GPU) and - other accelerators. - The interface is designed to be as close to C OpenCL interface as possible, - while written in native Fortran 90 with type checking. It was originally - designed as an OpenCL interface to be used by the Octopus code. - The interface is not complete but provides all the basic calls required to - write a full Fortran 90 OpenCL program. - </longdescription> +FortranCL is an OpenCL interface for Fortran 90. It allows programmers to call +the OpenCL parallel programming framework directly from Fortran, so developers +can accelerate their Fortran code using graphical processing units (GPU) and +other accelerators. +The interface is designed to be as close to C OpenCL interface as possible, +while written in native Fortran 90 with type checking. It was originally +designed as an OpenCL interface to be used by the Octopus code. +The interface is not complete but provides all the basic calls required to +write a full Fortran 90 OpenCL program. +</longdescription> </pkgmetadata> diff --git a/dev-libs/intel-common/metadata.xml b/dev-libs/intel-common/metadata.xml index ed553916d..8ed1d66f0 100644 --- a/dev-libs/intel-common/metadata.xml +++ b/dev-libs/intel-common/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - This package contains the core files to be installed for the Intel - compilers and libraries. Probably useless if installed standalone. - </longdescription> +This package contains the core files to be installed for the Intel +compilers and libraries. Probably useless if installed standalone. +</longdescription> <use> <flag name="compiler">Install the libraries needed for the icc and ifort compilers</flag> <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag> diff --git a/dev-libs/libconfig/metadata.xml b/dev-libs/libconfig/metadata.xml index 910ab564a..2d70bee59 100644 --- a/dev-libs/libconfig/metadata.xml +++ b/dev-libs/libconfig/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Libconfig is a simple library for processing structured configuration files. - Libconfig is very compact — a fraction of the size of the expat XML parser library. - This makes it well-suited for memory-constrained systems like handheld devices. - The library includes bindings for both the C and C++ languages. - It works on POSIX-compliant UNIX systems (GNU/Linux, Mac OS X, Solaris, FreeBSD). - </longdescription> +Libconfig is a simple library for processing structured configuration files. +Libconfig is very compact — a fraction of the size of the expat XML parser library. +This makes it well-suited for memory-constrained systems like handheld devices. +The library includes bindings for both the C and C++ languages. +It works on POSIX-compliant UNIX systems (GNU/Linux, Mac OS X, Solaris, FreeBSD). +</longdescription> </pkgmetadata> diff --git a/dev-libs/libflatarray/metadata.xml b/dev-libs/libflatarray/metadata.xml index e130eb4d7..124b52db7 100644 --- a/dev-libs/libflatarray/metadata.xml +++ b/dev-libs/libflatarray/metadata.xml @@ -2,11 +2,11 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription> - LibGeoDecomp is a multi-dimensional C++ array class which provides - an object-oriented view (a.k.a. array of structs, AoS) while - internally storing data in a struct of arrays (SoA) manner. It - comes with utilities to move data to CUDA enabled GPUs. - </longdescription> +LibGeoDecomp is a multi-dimensional C++ array class which provides +an object-oriented view (a.k.a. array of structs, AoS) while +internally storing data in a struct of arrays (SoA) manner. It +comes with utilities to move data to CUDA enabled GPUs. +</longdescription> <maintainer type="person"> <email>gentryx@gmx.de</email> </maintainer> @@ -16,7 +16,7 @@ </maintainer> <use> <flag name="cuda"> - Enables plugins for NVIDIA GPUs (e.g. CUDAAllocator) - </flag> +Enables plugins for NVIDIA GPUs (e.g. CUDAAllocator) +</flag> </use> </pkgmetadata> diff --git a/dev-libs/mxml/metadata.xml b/dev-libs/mxml/metadata.xml index 91b1cf5d1..42a46e0c3 100644 --- a/dev-libs/mxml/metadata.xml +++ b/dev-libs/mxml/metadata.xml @@ -5,13 +5,13 @@ <email>cjk34@cam.ac.uk</email> <name>Chris Kerr</name> <description>I don't develop this software, I'm just a Gentoo user who - wanted to install it</description> +wanted to install it</description> </maintainer> <maintainer type="project"> <email>sci@gentoo.org</email> <name>Gentoo Science Project</name> </maintainer> <longdescription>Mini-XML is a lightweight, ultra-portable XML library - that requires only an ANSI C compiler and a 'make' program.</longdescription> +that requires only an ANSI C compiler and a 'make' program.</longdescription> <use/> </pkgmetadata> diff --git a/dev-libs/simclist/metadata.xml b/dev-libs/simclist/metadata.xml index e795139c5..27a2343d7 100644 --- a/dev-libs/simclist/metadata.xml +++ b/dev-libs/simclist/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - SimCList is a high quality C (C++ embeddable) library for handling - lists. It exploits several advanced techniques for improving - performance, including freelists, sentinels, automatic sort algorithm - selection, sort randomization, mid pointer and optional multithreading. +SimCList is a high quality C (C++ embeddable) library for handling +lists. It exploits several advanced techniques for improving +performance, including freelists, sentinels, automatic sort algorithm +selection, sort randomization, mid pointer and optional multithreading. </longdescription> </pkgmetadata> diff --git a/dev-libs/utf8proc/metadata.xml b/dev-libs/utf8proc/metadata.xml index c6efd7d5b..b411feb93 100644 --- a/dev-libs/utf8proc/metadata.xml +++ b/dev-libs/utf8proc/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - utf8proc is a library for processing UTF-8 encoded Unicode - strings. Some features are Unicode normalization, stripping of - default ignorable characters, case folding and detection of grapheme - cluster boundaries. A special character mapping is available, which - converts for example the characters “Hyphen” (U+2010), “Minus” - (U+2212) and “Hyphen-Minus” (U+002D, ASCII Minus) all into the ASCII - minus sign, to make them equal for comparisons. - </longdescription> +utf8proc is a library for processing UTF-8 encoded Unicode +strings. Some features are Unicode normalization, stripping of +default ignorable characters, case folding and detection of grapheme +cluster boundaries. A special character mapping is available, which +converts for example the characters “Hyphen” (U+2010), “Minus” +(U+2212) and “Hyphen-Minus” (U+002D, ASCII Minus) all into the ASCII +minus sign, to make them equal for comparisons. +</longdescription> <upstream> <remote-id type="github">JuliaLang/utf8proc</remote-id> </upstream> diff --git a/dev-ml/lacaml/metadata.xml b/dev-ml/lacaml/metadata.xml index e3d0b1f12..ea2f7445d 100644 --- a/dev-ml/lacaml/metadata.xml +++ b/dev-ml/lacaml/metadata.xml @@ -7,7 +7,7 @@ </maintainer> <longdescription lang="en"> BLAS/LAPACK-interface for OCaml - </longdescription> +</longdescription> <upstream> <remote-id type="bitbucket">mmottl/lacaml</remote-id> </upstream> diff --git a/dev-ml/mlgmpidl/metadata.xml b/dev-ml/mlgmpidl/metadata.xml index 02da151ce..8c51f92e4 100644 --- a/dev-ml/mlgmpidl/metadata.xml +++ b/dev-ml/mlgmpidl/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - MLGMPIDL is a package offering an interface to the GMP and MPFR - libraries for OCaml version 3.07 or higher. The interface offers access - to almost all the functions of the library, and is decomposed into 7 - submodules. +MLGMPIDL is a package offering an interface to the GMP and MPFR +libraries for OCaml version 3.07 or higher. The interface offers access +to almost all the functions of the library, and is decomposed into 7 +submodules. </longdescription> <use> <flag name="mpfr">Add support for <pkg>dev-libs/mpfr</pkg></flag> diff --git a/dev-python/Forthon/metadata.xml b/dev-python/Forthon/metadata.xml index d97c22737..ac9ace72d 100644 --- a/dev-python/Forthon/metadata.xml +++ b/dev-python/Forthon/metadata.xml @@ -6,14 +6,14 @@ <name>Kacper Kowalik</name> </maintainer> <longdescription> - Forthon generates links between Fortran95 and Python. Python is a high - level, object oriented, interactive and scripting language that allows - a flexible and versatile interface to computational tools. The Forthon - package generates the necessary wrapping code which allows access to - the Fortran database and to the Fortran subroutines and - functions. This provides a development package where the - computationally intensive parts of a code can be written in efficient - Fortran, and the high level controlling code can be written in the - much more versatile Python language. +Forthon generates links between Fortran95 and Python. Python is a high +level, object oriented, interactive and scripting language that allows +a flexible and versatile interface to computational tools. The Forthon +package generates the necessary wrapping code which allows access to +the Fortran database and to the Fortran subroutines and +functions. This provides a development package where the +computationally intensive parts of a code can be written in efficient +Fortran, and the high level controlling code can be written in the +much more versatile Python language. </longdescription> </pkgmetadata> diff --git a/dev-python/PeakUtils/metadata.xml b/dev-python/PeakUtils/metadata.xml index 059847126..ba9535089 100644 --- a/dev-python/PeakUtils/metadata.xml +++ b/dev-python/PeakUtils/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - As the name implies, this package provides utilities related to the - detection of peaks on 1D data. Includes functions to perform - baseline estimation, to find the indexes of the peaks in the data - and performing Gaussian fitting or centroid computation to further - increase the resolution of the peak detection. - </longdescription> +As the name implies, this package provides utilities related to the +detection of peaks on 1D data. Includes functions to perform +baseline estimation, to find the indexes of the peaks in the data +and performing Gaussian fitting or centroid computation to further +increase the resolution of the peak detection. +</longdescription> <upstream> <remote-id type="bitbucket">lucashnegri/peakutils</remote-id> <remote-id type="pypi">PeakUtils</remote-id> diff --git a/dev-python/PyVISA-py/metadata.xml b/dev-python/PyVISA-py/metadata.xml index 6128d226c..b55b92cd3 100644 --- a/dev-python/PyVISA-py/metadata.xml +++ b/dev-python/PyVISA-py/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A PyVISA backend that implements a large part of the "Virtual - Instrument Software Architecture" (VISA) in pure Python. - </longdescription> +A PyVISA backend that implements a large part of the "Virtual +Instrument Software Architecture" (VISA) in pure Python. +</longdescription> <upstream> <remote-id type="github">hgrecco/pyvisa-py</remote-id> <remote-id type="pypi">PyVISA-py</remote-id> diff --git a/dev-python/PyVISA/metadata.xml b/dev-python/PyVISA/metadata.xml index 555e1ea28..1a5f4a861 100644 --- a/dev-python/PyVISA/metadata.xml +++ b/dev-python/PyVISA/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A Python package for support of the "Virtual Instrument Software - Architecture" (VISA), in order to control measurement devices and - test equipment via GPIB, RS232, Ethernet or USB. - </longdescription> +A Python package for support of the "Virtual Instrument Software +Architecture" (VISA), in order to control measurement devices and +test equipment via GPIB, RS232, Ethernet or USB. +</longdescription> <upstream> <remote-id type="github">hgrecco/pyvisa-py</remote-id> <remote-id type="pypi">PyVISA</remote-id> diff --git a/dev-python/arrayfire-python/metadata.xml b/dev-python/arrayfire-python/metadata.xml index c8d772966..8d4d250f0 100644 --- a/dev-python/arrayfire-python/metadata.xml +++ b/dev-python/arrayfire-python/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - ArrayFire is a high performance library for parallel computing - wih an easy-to-use API. This package project Python bindings - for the ArrayFire library. - </longdescription> +ArrayFire is a high performance library for parallel computing +wih an easy-to-use API. This package project Python bindings +for the ArrayFire library. +</longdescription> <upstream> <remote-id type="github">arrayfire/arrayfire-python</remote-id> <remote-id type="pypi">arrayfire</remote-id> diff --git a/dev-python/astropy-helpers/metadata.xml b/dev-python/astropy-helpers/metadata.xml index fec8db663..ddf49f5b8 100644 --- a/dev-python/astropy-helpers/metadata.xml +++ b/dev-python/astropy-helpers/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - astropy-helpers is a collection of build tools used by astropy - that may be used by other projects. - </longdescription> +astropy-helpers is a collection of build tools used by astropy +that may be used by other projects. +</longdescription> <upstream> <remote-id type="github">astropy/astropy-helpers</remote-id> </upstream> diff --git a/dev-python/astropysics/metadata.xml b/dev-python/astropysics/metadata.xml index 0ea741042..349a8c1e0 100644 --- a/dev-python/astropysics/metadata.xml +++ b/dev-python/astropysics/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Astropysics leverages a variety of tools already developed for python to simplify - quick-and-dirty calculations and streamline really hard ones. When paired with - an interactive environment, it aims to be a full-featured replacement for IDL - with idlutils/astron or similar. +Astropysics leverages a variety of tools already developed for python to simplify +quick-and-dirty calculations and streamline really hard ones. When paired with +an interactive environment, it aims to be a full-featured replacement for IDL +with idlutils/astron or similar. </longdescription> </pkgmetadata> diff --git a/dev-python/astroquery/metadata.xml b/dev-python/astroquery/metadata.xml index 2d17f54cd..bb6a20b51 100644 --- a/dev-python/astroquery/metadata.xml +++ b/dev-python/astroquery/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Astroquery is a package containing a collection of tools to use - online astronomical databases. It integrates with Astropy and aims - to support many services with a uniform API. - </longdescription> +Astroquery is a package containing a collection of tools to use +online astronomical databases. It integrates with Astropy and aims +to support many services with a uniform API. +</longdescription> <upstream> <remote-id type="github">astropy/astroquery</remote-id> </upstream> diff --git a/dev-python/brewer2mpl/metadata.xml b/dev-python/brewer2mpl/metadata.xml index e2e66a3e6..7cf56d68d 100644 --- a/dev-python/brewer2mpl/metadata.xml +++ b/dev-python/brewer2mpl/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - brewer2mpl is a pure Python package for accessing colorbrewer2.org - color maps from Python. With brewer2mpl you can get the raw RGB - colors of all 165 colorbrewer2.org color maps. The color map data - ships with brewer2mpl so no internet connection is required. - </longdescription> +brewer2mpl is a pure Python package for accessing colorbrewer2.org +color maps from Python. With brewer2mpl you can get the raw RGB +colors of all 165 colorbrewer2.org color maps. The color map data +ships with brewer2mpl so no internet connection is required. +</longdescription> <upstream> <remote-id type="github">jiffyclub/brewer2mpl</remote-id> <remote-id type="pypi">brewer2mpl</remote-id> diff --git a/dev-python/ccdproc/metadata.xml b/dev-python/ccdproc/metadata.xml index 47d993d8e..387ed8dcd 100644 --- a/dev-python/ccdproc/metadata.xml +++ b/dev-python/ccdproc/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - ccdproc is a AstroPy-affliated package for the basic reduction of - CCD images. It provides a framework for accounting for error propagation - and bad pixel tracking through the reduction steps. - </longdescription> +ccdproc is a AstroPy-affliated package for the basic reduction of +CCD images. It provides a framework for accounting for error propagation +and bad pixel tracking through the reduction steps. +</longdescription> <upstream> <remote-id type="github">astropy/ccdproc</remote-id> </upstream> diff --git a/dev-python/coards/metadata.xml b/dev-python/coards/metadata.xml index 95bd08e32..e36ff5368 100644 --- a/dev-python/coards/metadata.xml +++ b/dev-python/coards/metadata.xml @@ -6,9 +6,9 @@ <name>Tim Cera</name> </maintainer> <longdescription lang="en"> - This module converts between a given COARDS time specification and a Python - datetime object, which is much more useful. - </longdescription> +This module converts between a given COARDS time specification and a Python +datetime object, which is much more useful. +</longdescription> <upstream> <remote-id type="pypi">coards</remote-id> </upstream> diff --git a/dev-python/coords/metadata.xml b/dev-python/coords/metadata.xml index 3e5eb239e..cba3ccd1c 100644 --- a/dev-python/coords/metadata.xml +++ b/dev-python/coords/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - coords is a part of Astrolib and provide a set of routines for managing - astronomical coordinate systems +coords is a part of Astrolib and provide a set of routines for managing +astronomical coordinate systems </longdescription> </pkgmetadata> diff --git a/dev-python/cosmocalc/metadata.xml b/dev-python/cosmocalc/metadata.xml index fa2ced1cd..75645dd98 100644 --- a/dev-python/cosmocalc/metadata.xml +++ b/dev-python/cosmocalc/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Calculate useful values for a given cosmology. This module uses code - adapted from CC.py (James Schombert) which is a Python version of - the Cosmology Calculator (Ned Wright). +Calculate useful values for a given cosmology. This module uses code +adapted from CC.py (James Schombert) which is a Python version of +the Cosmology Calculator (Ned Wright). </longdescription> </pkgmetadata> diff --git a/dev-python/dijitso/metadata.xml b/dev-python/dijitso/metadata.xml index 0b22fbbcd..483c5a2ef 100644 --- a/dev-python/dijitso/metadata.xml +++ b/dev-python/dijitso/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - This module was written to improve a core component of the FEniCS - framework, namely the just in time compilation of C++ code that is - generated from Python modules, but is only called from within a C++ - library, and thus do not need wrapping in a nice Python interface. - </longdescription> +This module was written to improve a core component of the FEniCS +framework, namely the just in time compilation of C++ code that is +generated from Python modules, but is only called from within a C++ +library, and thus do not need wrapping in a nice Python interface. +</longdescription> <upstream> <remote-id type="bitbucket">fenics-project/dijitso</remote-id> </upstream> diff --git a/dev-python/ffc/metadata.xml b/dev-python/ffc/metadata.xml index bf5f22263..744ca900c 100644 --- a/dev-python/ffc/metadata.xml +++ b/dev-python/ffc/metadata.xml @@ -6,13 +6,13 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - FFC works as a compiler for multilinear forms by generating code (C or - C++) for the evaluation of a multilinear form given in mathematical - notation. This new approach to form evaluation makes it possible to - combine generality with efficiency; the form can be given in - mathematical notation and the generated code is as efficient as - hand-optimized code. - </longdescription> +FFC works as a compiler for multilinear forms by generating code (C or +C++) for the evaluation of a multilinear form given in mathematical +notation. This new approach to form evaluation makes it possible to +combine generality with efficiency; the form can be given in +mathematical notation and the generated code is as efficient as +hand-optimized code. +</longdescription> <upstream> <remote-id type="bitbucket">fenics-project/ffc</remote-id> </upstream> diff --git a/dev-python/ffnet/metadata.xml b/dev-python/ffnet/metadata.xml index 7bcbdf69d..7dfe9ca51 100644 --- a/dev-python/ffnet/metadata.xml +++ b/dev-python/ffnet/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - ffnet is a fast and easy-to-use feed-forward neural - network training library for python. - </longdescription> +ffnet is a fast and easy-to-use feed-forward neural +network training library for python. +</longdescription> <use> <flag name="matplotlib">Use matplotlib for drawing</flag> </use> diff --git a/dev-python/ffnetui/metadata.xml b/dev-python/ffnetui/metadata.xml index f55ef05e1..1b18e7538 100644 --- a/dev-python/ffnetui/metadata.xml +++ b/dev-python/ffnetui/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - GUI for ffnet - feed forward neural network for python - </longdescription> +GUI for ffnet - feed forward neural network for python +</longdescription> <upstream> <remote-id type="pypi">ffnetui</remote-id> <remote-id type="sourceforge">ffnet</remote-id> diff --git a/dev-python/fiat/metadata.xml b/dev-python/fiat/metadata.xml index 67ce0c487..d08e0d509 100644 --- a/dev-python/fiat/metadata.xml +++ b/dev-python/fiat/metadata.xml @@ -6,15 +6,15 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The FInite element Automatic Tabulator FIAT supports generation of - arbitrary order instances of the Lagrange elements on lines, triangles, - and tetrahedra. It is also capable of generating arbitrary order - instances of Jacobi-type quadrature rules on the same element shapes. - Further, H(div) and H(curl) conforming finite element spaces such as the - families of Raviart-Thomas, Brezzi-Douglas-Marini and Nedelec are - supported on triangles and tetrahedra. Upcoming versions will also - support Hermite and nonconforming elements. - </longdescription> +The FInite element Automatic Tabulator FIAT supports generation of +arbitrary order instances of the Lagrange elements on lines, triangles, +and tetrahedra. It is also capable of generating arbitrary order +instances of Jacobi-type quadrature rules on the same element shapes. +Further, H(div) and H(curl) conforming finite element spaces such as the +families of Raviart-Thomas, Brezzi-Douglas-Marini and Nedelec are +supported on triangles and tetrahedra. Upcoming versions will also +support Hermite and nonconforming elements. +</longdescription> <upstream> <remote-id type="bitbucket">fenics-project/fiat</remote-id> </upstream> diff --git a/dev-python/gammapy/metadata.xml b/dev-python/gammapy/metadata.xml index d691d33fe..a9f88e7d8 100644 --- a/dev-python/gammapy/metadata.xml +++ b/dev-python/gammapy/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Gammapy is a package for simulating and analysing gamma-ray sky data. - It is currently designed to support users of telescopes such as Fermi, - H.E.S.S, and CTA in primarily Galactic plane survey studies. - </longdescription> +Gammapy is a package for simulating and analysing gamma-ray sky data. +It is currently designed to support users of telescopes such as Fermi, +H.E.S.S, and CTA in primarily Galactic plane survey studies. +</longdescription> <upstream> <remote-id type="github">gammapy/gammapy</remote-id> </upstream> diff --git a/dev-python/hdf5storage/metadata.xml b/dev-python/hdf5storage/metadata.xml index 73ae4ea5c..00352099f 100644 --- a/dev-python/hdf5storage/metadata.xml +++ b/dev-python/hdf5storage/metadata.xml @@ -10,12 +10,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - This Python package provides high level utilities to read/write a - variety of Python types to/from HDF5 (Heirarchal Data Format) - formatted files. This package also provides support for MATLAB MAT - v7.3 formatted files, which are just HDF5 files with a different - extension and some extra meta-data. - </longdescription> +This Python package provides high level utilities to read/write a +variety of Python types to/from HDF5 (Heirarchal Data Format) +formatted files. This package also provides support for MATLAB MAT +v7.3 formatted files, which are just HDF5 files with a different +extension and some extra meta-data. +</longdescription> <upstream> <remote-id type="github">frejanordsiek/hdf5storage</remote-id> <remote-id type="pypi">hdf5storage</remote-id> diff --git a/dev-python/imageutils/metadata.xml b/dev-python/imageutils/metadata.xml index 95065b351..b75b1ab3a 100644 --- a/dev-python/imageutils/metadata.xml +++ b/dev-python/imageutils/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - imageutils is a collection of image processing utilities that are generally - useful to astronomers. These will likely become part of the core AstroPy - package before the 1.0 release. - </longdescription> +imageutils is a collection of image processing utilities that are generally +useful to astronomers. These will likely become part of the core AstroPy +package before the 1.0 release. +</longdescription> <upstream> <remote-id type="github">astropy/imageutils</remote-id> </upstream> diff --git a/dev-python/inference/metadata.xml b/dev-python/inference/metadata.xml index 528a07501..9e0d8673e 100644 --- a/dev-python/inference/metadata.xml +++ b/dev-python/inference/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The inference package is a collection of Python modules implementing - a variety of methods targeting the statistical inference - problems—and the statistical modeling style—of the physical - sciences. The target discipline is astronomy, and the choice of - problems and methods most directly targets the needs of astronomers, - but many tools here may be of use to other physical scientists. +The inference package is a collection of Python modules implementing +a variety of methods targeting the statistical inference +problems—and the statistical modeling style—of the physical +sciences. The target discipline is astronomy, and the choice of +problems and methods most directly targets the needs of astronomers, +but many tools here may be of use to other physical scientists. </longdescription> </pkgmetadata> diff --git a/dev-python/instant/metadata.xml b/dev-python/instant/metadata.xml index 8da29b3a0..bd49e87a7 100644 --- a/dev-python/instant/metadata.xml +++ b/dev-python/instant/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Instant is a Python module that allows for instant inlining of C and C++ - code in Python. It is a small Python module built on top of SWIG and - Distutils. It is part of the FEniCS Project (http://www.fenics.org) - </longdescription> +Instant is a Python module that allows for instant inlining of C and C++ +code in Python. It is a small Python module built on top of SWIG and +Distutils. It is part of the FEniCS Project (http://www.fenics.org) +</longdescription> <upstream> <remote-id type="bitbucket">fenics-project/instant</remote-id> </upstream> diff --git a/dev-python/ipykernel/metadata.xml b/dev-python/ipykernel/metadata.xml index a938c561c..d1399a897 100644 --- a/dev-python/ipykernel/metadata.xml +++ b/dev-python/ipykernel/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - This package provides the IPython kernel for Jupyter. - </longdescription> +This package provides the IPython kernel for Jupyter. +</longdescription> <upstream> <remote-id type="github">ipython/ipykernel</remote-id> </upstream> diff --git a/dev-python/ipyparallel/metadata.xml b/dev-python/ipyparallel/metadata.xml index d636b5640..1d9e7c2d3 100644 --- a/dev-python/ipyparallel/metadata.xml +++ b/dev-python/ipyparallel/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Interactive Parallel Computing with IPython. - ipyparallel is the new home of IPython.parallel. - </longdescription> +Interactive Parallel Computing with IPython. +ipyparallel is the new home of IPython.parallel. +</longdescription> </pkgmetadata> diff --git a/dev-python/ipython_genutils/metadata.xml b/dev-python/ipython_genutils/metadata.xml index 92090add1..05e43b726 100644 --- a/dev-python/ipython_genutils/metadata.xml +++ b/dev-python/ipython_genutils/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - This package contains some common utilities shared by Jupyter and - IPython projects during The Big Split. As soon as possible, those - packages will remove their dependency on this, and this repo will - go away. No packages outside IPython/Jupyter should depend on it. - </longdescription> +This package contains some common utilities shared by Jupyter and +IPython projects during The Big Split. As soon as possible, those +packages will remove their dependency on this, and this repo will +go away. No packages outside IPython/Jupyter should depend on it. +</longdescription> <upstream> <remote-id type="github">ipython/ipython_genutils</remote-id> </upstream> diff --git a/dev-python/ipywidgets/metadata.xml b/dev-python/ipywidgets/metadata.xml index 7c5fbee17..0349df8c5 100644 --- a/dev-python/ipywidgets/metadata.xml +++ b/dev-python/ipywidgets/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Interactive HTML widgets for Jupyter notebooks and the IPython - kernel. - </longdescription> +Interactive HTML widgets for Jupyter notebooks and the IPython +kernel. +</longdescription> <upstream> <remote-id type="pypi">ipywidgets</remote-id> </upstream> diff --git a/dev-python/jupyter_client/metadata.xml b/dev-python/jupyter_client/metadata.xml index e7ee52515..c8a2d03e4 100644 --- a/dev-python/jupyter_client/metadata.xml +++ b/dev-python/jupyter_client/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Contains the reference implementation of the Jupyter protocol. It - also provides client and kernel management APIs for working with - kernels. It also provides the jupyter kernelspec entrypoint for - installing kernelspecs for use with Jupyter frontends. - </longdescription> +Contains the reference implementation of the Jupyter protocol. It +also provides client and kernel management APIs for working with +kernels. It also provides the jupyter kernelspec entrypoint for +installing kernelspecs for use with Jupyter frontends. +</longdescription> </pkgmetadata> diff --git a/dev-python/jupyter_console/metadata.xml b/dev-python/jupyter_console/metadata.xml index 553beaef0..d7078d3ee 100644 --- a/dev-python/jupyter_console/metadata.xml +++ b/dev-python/jupyter_console/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A terminal-based console frontend for Jupyter kernels. - This code is based on the single-process IPython terminal. - </longdescription> +A terminal-based console frontend for Jupyter kernels. +This code is based on the single-process IPython terminal. +</longdescription> </pkgmetadata> diff --git a/dev-python/jupyter_core/metadata.xml b/dev-python/jupyter_core/metadata.xml index af36b0845..73840fc5c 100644 --- a/dev-python/jupyter_core/metadata.xml +++ b/dev-python/jupyter_core/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Core common functionality of Jupyter projects. - This package contains base application classes and configuration - inhertited by other projects. It doesn't do much on its own. - </longdescription> +Core common functionality of Jupyter projects. +This package contains base application classes and configuration +inhertited by other projects. It doesn't do much on its own. +</longdescription> </pkgmetadata> diff --git a/dev-python/matlab_wrapper/metadata.xml b/dev-python/matlab_wrapper/metadata.xml index fc0385f4f..4981c3b8a 100644 --- a/dev-python/matlab_wrapper/metadata.xml +++ b/dev-python/matlab_wrapper/metadata.xml @@ -10,12 +10,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - matlab_wrapper allows you to use MATLAB in a convenient way in - Python. You can call MATLAB functions and access workspace - variables directly from your Python scripts and interactive - shell. MATLAB session is started in the background and appears - as a regular Python module. - </longdescription> +matlab_wrapper allows you to use MATLAB in a convenient way in +Python. You can call MATLAB functions and access workspace +variables directly from your Python scripts and interactive +shell. MATLAB session is started in the background and appears +as a regular Python module. +</longdescription> <upstream> <remote-id type="github">mrkrd/matlab_wrapper</remote-id> <remote-id type="pypi">matlab_wrapper</remote-id> diff --git a/dev-python/matrix2latex/metadata.xml b/dev-python/matrix2latex/metadata.xml index c84a3bc91..62facfd12 100644 --- a/dev-python/matrix2latex/metadata.xml +++ b/dev-python/matrix2latex/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - A tool for converting Python or MATLAB matrices to - LaTeX tables, that can optionally create self-sustained - LATeX documents and compile them. - </longdescription> +A tool for converting Python or MATLAB matrices to +LaTeX tables, that can optionally create self-sustained +LATeX documents and compile them. +</longdescription> <upstream> <remote-id type="github">TheChymera/matrix2latex</remote-id> </upstream> diff --git a/dev-python/meshpy/metadata.xml b/dev-python/meshpy/metadata.xml index 250f08d0e..fff86775c 100644 --- a/dev-python/meshpy/metadata.xml +++ b/dev-python/meshpy/metadata.xml @@ -12,7 +12,7 @@ also have many other applications ranging from computer graphics to robotics. In order to generate these 2D and 3D meshes, MeshPy provides Python interfaces to two well-regarded mesh generators, Triangle by J. Shewchuk and TetGen by Hang Si. Both are included in the package in slightly modified versions. - </longdescription> +</longdescription> <upstream> <remote-id type="pypi">MeshPy</remote-id> </upstream> diff --git a/dev-python/metakernel/metadata.xml b/dev-python/metakernel/metadata.xml index 15370beff..1a16e93ec 100644 --- a/dev-python/metakernel/metadata.xml +++ b/dev-python/metakernel/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A Jupyter/IPython kernel template which includes core magic - functions (including help, command and file path completion, - parallel and distributed processing, downloads, and much more). - </longdescription> +A Jupyter/IPython kernel template which includes core magic +functions (including help, command and file path completion, +parallel and distributed processing, downloads, and much more). +</longdescription> <upstream> <remote-id type="github">Calysto/metakernel</remote-id> <remote-id type="pypi">metakernel</remote-id> diff --git a/dev-python/metakernel_bash/metadata.xml b/dev-python/metakernel_bash/metadata.xml index 932dab97a..e63da5337 100644 --- a/dev-python/metakernel_bash/metadata.xml +++ b/dev-python/metakernel_bash/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A Bash kernel for Jupyter/IPython, based on MetaKernel. - </longdescription> +A Bash kernel for Jupyter/IPython, based on MetaKernel. +</longdescription> <upstream> <remote-id type="github">Calysto/metakernel</remote-id> <remote-id type="pypi">metakernel_bash</remote-id> diff --git a/dev-python/metakernel_python/metadata.xml b/dev-python/metakernel_python/metadata.xml index 6a1c69057..0abf27730 100644 --- a/dev-python/metakernel_python/metadata.xml +++ b/dev-python/metakernel_python/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A Python kernel for Jupyter/IPython, based on MetaKernel. - </longdescription> +A Python kernel for Jupyter/IPython, based on MetaKernel. +</longdescription> <upstream> <remote-id type="github">Calysto/metakernel</remote-id> <remote-id type="pypi">metakernel_python</remote-id> diff --git a/dev-python/nbconvert/metadata.xml b/dev-python/nbconvert/metadata.xml index e26b3e53a..5e646a7e0 100644 --- a/dev-python/nbconvert/metadata.xml +++ b/dev-python/nbconvert/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Jupyter NBConvert converts Jupyter notebooks to various other - formats via Jinja templates. - </longdescription> +Jupyter NBConvert converts Jupyter notebooks to various other +formats via Jinja templates. +</longdescription> </pkgmetadata> diff --git a/dev-python/nbdime/metadata.xml b/dev-python/nbdime/metadata.xml index b57da319a..b3a30b1ae 100644 --- a/dev-python/nbdime/metadata.xml +++ b/dev-python/nbdime/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - nbdime provides tools for diffing and merging of Jupyter Notebooks. - </longdescription> +nbdime provides tools for diffing and merging of Jupyter Notebooks. +</longdescription> <use> <flag name="webtools"> - Install web-based diff and merge tools. - </flag> +Install web-based diff and merge tools. +</flag> </use> </pkgmetadata> diff --git a/dev-python/nbformat/metadata.xml b/dev-python/nbformat/metadata.xml index d58b06385..0bd1894f0 100644 --- a/dev-python/nbformat/metadata.xml +++ b/dev-python/nbformat/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Jupyther nbformat contains the reference implementation of the - Jupyter Notebook format, and Python APIs for working with - notebooks. There is also a JSON schema for notebook format - versions >= 3. - </longdescription> +Jupyther nbformat contains the reference implementation of the +Jupyter Notebook format, and Python APIs for working with +notebooks. There is also a JSON schema for notebook format +versions >= 3. +</longdescription> </pkgmetadata> diff --git a/dev-python/nbviewer/metadata.xml b/dev-python/nbviewer/metadata.xml index fed1faba7..b7acb9324 100644 --- a/dev-python/nbviewer/metadata.xml +++ b/dev-python/nbviewer/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Jupyter nbviewer is the web application behind The Jupyter Notebook - Viewer, which is graciously hosted by Rackspace. Run this locally - to get most of the features of nbviewer on your own network. - </longdescription> +Jupyter nbviewer is the web application behind The Jupyter Notebook +Viewer, which is graciously hosted by Rackspace. Run this locally +to get most of the features of nbviewer on your own network. +</longdescription> </pkgmetadata> diff --git a/dev-python/newrelic/metadata.xml b/dev-python/newrelic/metadata.xml index c6f6fe8d4..7f0f33d60 100644 --- a/dev-python/newrelic/metadata.xml +++ b/dev-python/newrelic/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Python agent for the New Relic web application performance - monitoring service. - </longdescription> +Python agent for the New Relic web application performance +monitoring service. +</longdescription> <upstream> <remote-id type="pypi">newrelic</remote-id> </upstream> diff --git a/dev-python/notebook/metadata.xml b/dev-python/notebook/metadata.xml index 36a119d62..9b08c7c0f 100644 --- a/dev-python/notebook/metadata.xml +++ b/dev-python/notebook/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - The Jupyter HTML notebook is a web-based notebook environment - for interactive computing. - </longdescription> +The Jupyter HTML notebook is a web-based notebook environment +for interactive computing. +</longdescription> <upstream> <remote-id type="pypi">notebook</remote-id> </upstream> diff --git a/dev-python/pamela/metadata.xml b/dev-python/pamela/metadata.xml index 879389634..e458bccf6 100644 --- a/dev-python/pamela/metadata.xml +++ b/dev-python/pamela/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - An interface to the Pluggable Authentication Modules (PAM) library, - written in pure Python (using ctypes). - </longdescription> +An interface to the Pluggable Authentication Modules (PAM) library, +written in pure Python (using ctypes). +</longdescription> <upstream> <remote-id type="github">minrk/pamela</remote-id> <remote-id type="pypi">pamela</remote-id> diff --git a/dev-python/photutils/metadata.xml b/dev-python/photutils/metadata.xml index d98fc6b24..5c3d380b2 100644 --- a/dev-python/photutils/metadata.xml +++ b/dev-python/photutils/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - photutils is a python package for determining photometric properties - of sources in astronomical images. This includes source detection, - centroid and shape parameters, and performing photometry. - </longdescription> +photutils is a python package for determining photometric properties +of sources in astronomical images. This includes source detection, +centroid and shape parameters, and performing photometry. +</longdescription> <upstream> <remote-id type="github">astropy/photutils</remote-id> </upstream> diff --git a/dev-python/pickleshare/metadata.xml b/dev-python/pickleshare/metadata.xml index ae14e7372..4898921bd 100644 --- a/dev-python/pickleshare/metadata.xml +++ b/dev-python/pickleshare/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Like shelve, a PickleShareDB object acts like a normal dictionary. - Unlike shelve, many processes can access the database - simultaneously. Changing a value in database is immediately visible - to other processes accessing the same database. - Concurrency is possible because the values are stored in separate - files. Hence the "database" is a directory where all files are - governed by PickleShare. - </longdescription> +Like shelve, a PickleShareDB object acts like a normal dictionary. +Unlike shelve, many processes can access the database +simultaneously. Changing a value in database is immediately visible +to other processes accessing the same database. +Concurrency is possible because the values are stored in separate +files. Hence the "database" is a directory where all files are +governed by PickleShare. +</longdescription> <upstream> <remote-id type="github">pickleshare/pickleshare</remote-id> </upstream> diff --git a/dev-python/prettyplotlib/metadata.xml b/dev-python/prettyplotlib/metadata.xml index a1a656ec9..6f1686f39 100644 --- a/dev-python/prettyplotlib/metadata.xml +++ b/dev-python/prettyplotlib/metadata.xml @@ -6,9 +6,9 @@ <name>Marius Brehler</name> </maintainer> <longdescription> - Python matplotlib-enhancer library which painlessly creates - beautiful default matplotlib plots. - </longdescription> +Python matplotlib-enhancer library which painlessly creates +beautiful default matplotlib plots. +</longdescription> <upstream> <remote-id type="pypi">prettyplotlib</remote-id> </upstream> diff --git a/dev-python/prov/metadata.xml b/dev-python/prov/metadata.xml index fc3d9fabb..d73a01129 100644 --- a/dev-python/prov/metadata.xml +++ b/dev-python/prov/metadata.xml @@ -10,8 +10,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - A library for W3C Provenance Data Model supporting PROV-JSON and PROV-XML import/export - </longdescription> +A library for W3C Provenance Data Model supporting PROV-JSON and PROV-XML import/export +</longdescription> <upstream> <remote-id type="pypi">prov</remote-id> </upstream> diff --git a/dev-python/pydotplus/metadata.xml b/dev-python/pydotplus/metadata.xml index e20862b8a..aa8f9c150 100644 --- a/dev-python/pydotplus/metadata.xml +++ b/dev-python/pydotplus/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - PyDotPlus is an improved version of the old pydot project that provides a Python Interface to - Graphviz’s Dot language. - </longdescription> +PyDotPlus is an improved version of the old pydot project that provides a Python Interface to +Graphviz’s Dot language. +</longdescription> <upstream> <remote-id type="pypi">pydotplus</remote-id> </upstream> diff --git a/dev-python/pyfftw/metadata.xml b/dev-python/pyfftw/metadata.xml index bc5ec1bc7..c93b316f7 100644 --- a/dev-python/pyfftw/metadata.xml +++ b/dev-python/pyfftw/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A pythonic wrapper around FFTW, the FFT library, presenting a - unified interface for all the supported transforms. - </longdescription> +A pythonic wrapper around FFTW, the FFT library, presenting a +unified interface for all the supported transforms. +</longdescription> <upstream> <remote-id type="pypi">pyFFTW</remote-id> </upstream> diff --git a/dev-python/pylibconfig2/metadata.xml b/dev-python/pylibconfig2/metadata.xml index 78f60d79f..cbff41127 100644 --- a/dev-python/pylibconfig2/metadata.xml +++ b/dev-python/pylibconfig2/metadata.xml @@ -10,14 +10,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Pure python library for libconfig syntax. - IO works via strings, and include directives. +Pure python library for libconfig syntax. +IO works via strings, and include directives. - Scalar types are pythons basic types str, int, long, float, bool. - The libconfig types Array, List, Group are implemented as ConfArray, - ConfList, ConfGroup, respectively. A config is setup from a string - only, and represented as a string automatically. - </longdescription> +Scalar types are pythons basic types str, int, long, float, bool. +The libconfig types Array, List, Group are implemented as ConfArray, +ConfList, ConfGroup, respectively. A config is setup from a string +only, and represented as a string automatically. +</longdescription> <upstream> <remote-id type="github">heinzK1X/pylibconfig2</remote-id> <remote-id type="pypi">pylibconfig2</remote-id> diff --git a/dev-python/pynomo/metadata.xml b/dev-python/pynomo/metadata.xml index 6e70e7086..9e69d00fa 100644 --- a/dev-python/pynomo/metadata.xml +++ b/dev-python/pynomo/metadata.xml @@ -5,10 +5,10 @@ <email>witold.pilat@gmail.com</email> </maintainer> <longdescription> - Pynomo is a program to create (pdf) nomographs - (nomograms) using Python interpreter. A nomograph (nomogram) is a - graphical solution to an equation. - </longdescription> +Pynomo is a program to create (pdf) nomographs +(nomograms) using Python interpreter. A nomograph (nomogram) is a +graphical solution to an equation. +</longdescription> <upstream> <remote-id type="sourceforge">pynomo</remote-id> </upstream> diff --git a/dev-python/pysolar/metadata.xml b/dev-python/pysolar/metadata.xml index 6e7d0ab03..6776625c7 100644 --- a/dev-python/pysolar/metadata.xml +++ b/dev-python/pysolar/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Pysolar is a collection of Python libraries for simulating the - irradiation of any point on earth by the sun. It includes code for - extremely precise ephemeris calculations, and more. Pysolar can - calculate the location of the sun or the shading percentage as a - function of time for a row of 2-axis tracked panels. - </longdescription> +Pysolar is a collection of Python libraries for simulating the +irradiation of any point on earth by the sun. It includes code for +extremely precise ephemeris calculations, and more. Pysolar can +calculate the location of the sun or the shading percentage as a +function of time for a row of 2-axis tracked panels. +</longdescription> <upstream> <remote-id type="github">pingswept/pysolar</remote-id> </upstream> diff --git a/dev-python/python-ivi/metadata.xml b/dev-python/python-ivi/metadata.xml index 1944d07dc..0b9069525 100644 --- a/dev-python/python-ivi/metadata.xml +++ b/dev-python/python-ivi/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Python IVI is a Python-based interpretation of the Interchangeable - Virtual Instrument standard from the IVI foundation. Python IVI can - use Python VXI-11, Python USBTMC, PyVISA, pySerial and linux-gpib to - connect to instruments. - </longdescription> +Python IVI is a Python-based interpretation of the Interchangeable +Virtual Instrument standard from the IVI foundation. Python IVI can +use Python VXI-11, Python USBTMC, PyVISA, pySerial and linux-gpib to +connect to instruments. +</longdescription> <upstream> <remote-id type="github">python-ivi/python-ivi</remote-id> </upstream> diff --git a/dev-python/python-vxi11/metadata.xml b/dev-python/python-vxi11/metadata.xml index 49ec289af..80031f312 100644 --- a/dev-python/python-vxi11/metadata.xml +++ b/dev-python/python-vxi11/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Python VXI-11 is a Python implementation of the VXI-11 Ethernet - instrument control protocol. It is compatible with VXI-11, - LXI instruments and VXI-11 to GPIB bridges (HP E2050A, etc.). - </longdescription> +Python VXI-11 is a Python implementation of the VXI-11 Ethernet +instrument control protocol. It is compatible with VXI-11, +LXI instruments and VXI-11 to GPIB bridges (HP E2050A, etc.). +</longdescription> <upstream> <remote-id type="github">python-ivi/python-vxi11</remote-id> </upstream> diff --git a/dev-python/pywcsgrid2/metadata.xml b/dev-python/pywcsgrid2/metadata.xml index 4291064d5..c240a7553 100644 --- a/dev-python/pywcsgrid2/metadata.xml +++ b/dev-python/pywcsgrid2/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - pywcsgrid2 provides a custom Axes class (derived from matplotlib's - original Axes class) suitable for displaying fits images. Its main - functionality is to draw ticks, ticklabels, and grids in an - appropriate sky coordinates. - </longdescription> +pywcsgrid2 provides a custom Axes class (derived from matplotlib's +original Axes class) suitable for displaying fits images. Its main +functionality is to draw ticks, ticklabels, and grids in an +appropriate sky coordinates. +</longdescription> </pkgmetadata> diff --git a/dev-python/qtconsole/metadata.xml b/dev-python/qtconsole/metadata.xml index 49db3eb90..d90e4df14 100644 --- a/dev-python/qtconsole/metadata.xml +++ b/dev-python/qtconsole/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A rich Qt-based console for working with Jupyter kernels, - supporting rich media output, session export, and more. - </longdescription> +A rich Qt-based console for working with Jupyter kernels, +supporting rich media output, session export, and more. +</longdescription> </pkgmetadata> diff --git a/dev-python/specutils/metadata.xml b/dev-python/specutils/metadata.xml index bbb7bb9f3..d8e354751 100644 --- a/dev-python/specutils/metadata.xml +++ b/dev-python/specutils/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - specutils is a package to implement utilities and data structures to - analyse astronomical spectra within python. It extends NDData from Astropy - into a class with special handling of 1D spectra. - </longdescription> +specutils is a package to implement utilities and data structures to +analyse astronomical spectra within python. It extends NDData from Astropy +into a class with special handling of 1D spectra. +</longdescription> <upstream> <remote-id type="github">astropy/specutils</remote-id> </upstream> diff --git a/dev-python/testpath/metadata.xml b/dev-python/testpath/metadata.xml index 2d4f93498..8129b08bc 100644 --- a/dev-python/testpath/metadata.xml +++ b/dev-python/testpath/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Testpath is a collection of utilities for Python code working with - files and commands. It contains functions to check things on the - filesystem, and tools for mocking system commands and recording - calls to those. - </longdescription> +Testpath is a collection of utilities for Python code working with +files and commands. It contains functions to check things on the +filesystem, and tools for mocking system commands and recording +calls to those. +</longdescription> </pkgmetadata> diff --git a/dev-python/traitlets/metadata.xml b/dev-python/traitlets/metadata.xml index cad83b0c6..3f68d9cc7 100644 --- a/dev-python/traitlets/metadata.xml +++ b/dev-python/traitlets/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A lightweight pure-Python derivative of Enthought Traits, - used for configuring Python objects. This package powers - the config system of IPython and Jupyter. - </longdescription> +A lightweight pure-Python derivative of Enthought Traits, +used for configuring Python objects. This package powers +the config system of IPython and Jupyter. +</longdescription> <upstream> <remote-id type="github">ipython/traitlets</remote-id> </upstream> diff --git a/dev-python/ufl/metadata.xml b/dev-python/ufl/metadata.xml index 649442138..142da2a70 100644 --- a/dev-python/ufl/metadata.xml +++ b/dev-python/ufl/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Unified Form Language (UFL) is a domain specific language for - declaration of finite element discretizations of variational forms. More - precisely, it defines a flexible interface for choosing finite element - spaces and defining expressions for weak forms in a notation close to - mathematical notation. - </longdescription> +The Unified Form Language (UFL) is a domain specific language for +declaration of finite element discretizations of variational forms. More +precisely, it defines a flexible interface for choosing finite element +spaces and defining expressions for weak forms in a notation close to +mathematical notation. +</longdescription> <upstream> <remote-id type="bitbucket">fenics-project/ufl</remote-id> </upstream> diff --git a/dev-python/viper/metadata.xml b/dev-python/viper/metadata.xml index 430a78511..6c82f77b4 100644 --- a/dev-python/viper/metadata.xml +++ b/dev-python/viper/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Viper is a minimalistic scientific plotter and run-time visualization - module. Viper has support for visualizing meshes and solutions in - DOLFIN. - </longdescription> +Viper is a minimalistic scientific plotter and run-time visualization +module. Viper has support for visualizing meshes and solutions in +DOLFIN. +</longdescription> <upstream> <remote-id type="launchpad">fenics-viper</remote-id> </upstream> diff --git a/dev-python/widgetsnbextension/metadata.xml b/dev-python/widgetsnbextension/metadata.xml index a594f2891..3df0fc455 100644 --- a/dev-python/widgetsnbextension/metadata.xml +++ b/dev-python/widgetsnbextension/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Interactive HTML widgets for Jupyter notebooks. - </longdescription> +Interactive HTML widgets for Jupyter notebooks. +</longdescription> <upstream> <remote-id type="pypi">widgetsnbextension</remote-id> </upstream> diff --git a/dev-util/VampirTrace/metadata.xml b/dev-util/VampirTrace/metadata.xml index 30bd07139..08eda31af 100644 --- a/dev-util/VampirTrace/metadata.xml +++ b/dev-util/VampirTrace/metadata.xml @@ -2,8 +2,8 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription> - VampirTrace is an open source library that allows detailed logging of program execution for parallel applications using message passing (MPI) and threads (OpenMP), Pthreads). Besides these typical parallelization paradigms, VampirTrace is capable of tracing GPU accelerated applications and generates exact time stamps for all GPU related events. - </longdescription> +VampirTrace is an open source library that allows detailed logging of program execution for parallel applications using message passing (MPI) and threads (OpenMP), Pthreads). Besides these typical parallelization paradigms, VampirTrace is capable of tracing GPU accelerated applications and generates exact time stamps for all GPU related events. +</longdescription> <maintainer type="person"> <email>gentryx@gmx.de</email> </maintainer> @@ -13,7 +13,7 @@ </maintainer> <use> <flag name="cuda"> - Enable tracing of CUDA calls and GPU kernels. - </flag> +Enable tracing of CUDA calls and GPU kernels. +</flag> </use> </pkgmetadata> diff --git a/dev-util/amdapp/metadata.xml b/dev-util/amdapp/metadata.xml index 4557d6be7..c5c89b820 100644 --- a/dev-util/amdapp/metadata.xml +++ b/dev-util/amdapp/metadata.xml @@ -2,9 +2,9 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription> - AMD Accelerated Parallel Processing (APP) is an SDK which includes - the Bolt libraries and an OpenCL implementation for AMD's CPUs and GPUs. - </longdescription> +AMD Accelerated Parallel Processing (APP) is an SDK which includes +the Bolt libraries and an OpenCL implementation for AMD's CPUs and GPUs. +</longdescription> <maintainer type="person"> <email>gentryx@gmx.de</email> </maintainer> diff --git a/dev-util/nvidia-cuda-gdk/metadata.xml b/dev-util/nvidia-cuda-gdk/metadata.xml index 36d95e29b..d335675d1 100644 --- a/dev-util/nvidia-cuda-gdk/metadata.xml +++ b/dev-util/nvidia-cuda-gdk/metadata.xml @@ -10,15 +10,15 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - The GPU Deployment Kit (previously known as the Tesla Deployment - Kit) is a set of tools provided for the NVIDIA Tesla™, GRID™ and - Quadro™ GPUs. - </longdescription> +The GPU Deployment Kit (previously known as the Tesla Deployment +Kit) is a set of tools provided for the NVIDIA Tesla™, GRID™ and +Quadro™ GPUs. +</longdescription> <use> <flag name="healthmon">Install nvidia-healthmon.</flag> <flag name="nvml">Install the NVIDIA Managment Library.</flag> <flag name="nvvs"> - Install the NVIDIA Validation Suite. - </flag> +Install the NVIDIA Validation Suite. +</flag> </use> </pkgmetadata> diff --git a/media-gfx/brlcad/metadata.xml b/media-gfx/brlcad/metadata.xml index efdd0d778..5a5505b09 100644 --- a/media-gfx/brlcad/metadata.xml +++ b/media-gfx/brlcad/metadata.xml @@ -14,25 +14,25 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - BRL-CAD is a Combinatorial/Constructive Solid Geometry (CSG) - solid modeling system that includes an interactive geometry editor, - ray-tracing support for rendering and geometric analysis, - network-distributed framebuffer support, image and signal-processing - tools, and an embedded scripting language. - - The package is a collection of over 400 tools and utilities. Included - is support for various geometric data format conversions, image and - signal processing capabilities, ray-tracing based lighting models, - network distributed ray-tracing, parallel ray-tracing, animation - capabilities, data compression, image handling, and interactive 3-D - geometric editing, and also an implementation of Weiler's n-Manifold - Geometry (NMG) data structures for surface-based solid models and - photon mapping. - </longdescription> +BRL-CAD is a Combinatorial/Constructive Solid Geometry (CSG) +solid modeling system that includes an interactive geometry editor, +ray-tracing support for rendering and geometric analysis, +network-distributed framebuffer support, image and signal-processing +tools, and an embedded scripting language. + +The package is a collection of over 400 tools and utilities. Included +is support for various geometric data format conversions, image and +signal processing capabilities, ray-tracing based lighting models, +network distributed ray-tracing, parallel ray-tracing, animation +capabilities, data compression, image handling, and interactive 3-D +geometric editing, and also an implementation of Weiler's n-Manifold +Geometry (NMG) data structures for surface-based solid models and +photon mapping. +</longdescription> <use> <flag name="benchmarks"> - Run benchmarks during test phase (need test option enabled) - </flag> +Run benchmarks during test phase (need test option enabled) +</flag> </use> <upstream> <remote-id type="sourceforge">brlcad</remote-id> diff --git a/media-libs/glbinding/metadata.xml b/media-libs/glbinding/metadata.xml index 2fa046d66..7e15e92be 100644 --- a/media-libs/glbinding/metadata.xml +++ b/media-libs/glbinding/metadata.xml @@ -10,17 +10,17 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - glbinding leverages modern C++11 features like enum classes, - lambdas, and variadic templates, instead of relying on macros; all - OpenGL symbols are real functions and variables. It provides - type-safe parameters, per feature API header, lazy function - resolution, multi-context and multi-thread support, global and local - function callbacks, meta information about the generated OpenGL - binding and the OpenGL runtime, as well as tools and examples for - quick-starting your projects. Based on the OpenGL API specification - (gl.xml) glbinding is generated using python scripts and templates - that can be easily adapted to fit custom needs. - </longdescription> +glbinding leverages modern C++11 features like enum classes, +lambdas, and variadic templates, instead of relying on macros; all +OpenGL symbols are real functions and variables. It provides +type-safe parameters, per feature API header, lazy function +resolution, multi-context and multi-thread support, global and local +function callbacks, meta information about the generated OpenGL +binding and the OpenGL runtime, as well as tools and examples for +quick-starting your projects. Based on the OpenGL API specification +(gl.xml) glbinding is generated using python scripts and templates +that can be easily adapted to fit custom needs. +</longdescription> <upstream> <remote-id type="github">cginternals/glbinding</remote-id> </upstream> diff --git a/net-misc/cernbox-client/metadata.xml b/net-misc/cernbox-client/metadata.xml index 039060696..ac0a4fc58 100644 --- a/net-misc/cernbox-client/metadata.xml +++ b/net-misc/cernbox-client/metadata.xml @@ -6,16 +6,16 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - This service provides a cloud synchronisation service for all CERN users between personal devices (like a laptop) and a centrally-managed data storage. +This service provides a cloud synchronisation service for all CERN users between personal devices (like a laptop) and a centrally-managed data storage. - Available to all CERN users. This service provides synchronisation capabilities: - everyone having a CERN computing account can use box to synchronise data (files and directories) across a series of (mobile) devices (smartphones, tablet, laptop, desktop). - Major software distributions are supported (notably recent Mac, Linux and Windows). +Available to all CERN users. This service provides synchronisation capabilities: +everyone having a CERN computing account can use box to synchronise data (files and directories) across a series of (mobile) devices (smartphones, tablet, laptop, desktop). +Major software distributions are supported (notably recent Mac, Linux and Windows). - The service provides off-line eventually synchronised access to data and it is also meant for data sharing across collaborators (for example to share presentations or text documents). +The service provides off-line eventually synchronised access to data and it is also meant for data sharing across collaborators (for example to share presentations or text documents). - The service is not suitable for critical-path activities like data acquisition, world-wide data distribution and massive batch processing. - </longdescription> +The service is not suitable for critical-path activities like data acquisition, world-wide data distribution and massive batch processing. +</longdescription> <use> <flag name="dolphin">Install the <pkg>kde-apps/dolphin</pkg> extension</flag> <flag name="nautilus">Install the <pkg>gnome-base/nautilus</pkg> extension</flag> diff --git a/sci-astronomy/bpz/metadata.xml b/sci-astronomy/bpz/metadata.xml index b57d8eab6..008ef62b2 100644 --- a/sci-astronomy/bpz/metadata.xml +++ b/sci-astronomy/bpz/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Bayesian Photometric Redshifts is a method to infere photometric - redshifts of galaxies. +Bayesian Photometric Redshifts is a method to infere photometric +redshifts of galaxies. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/casapy-bin/metadata.xml b/sci-astronomy/casapy-bin/metadata.xml index fdf3ea3f5..ef1c2d6cc 100644 --- a/sci-astronomy/casapy-bin/metadata.xml +++ b/sci-astronomy/casapy-bin/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription> - CASA, the Common Astronomy Software Applications package, is being developed - with the primary goal of supporting the data post-processing needs of the - next generation of radio astronomical telescopes such as ALMA and VLA. - </longdescription> +CASA, the Common Astronomy Software Applications package, is being developed +with the primary goal of supporting the data post-processing needs of the +next generation of radio astronomical telescopes such as ALMA and VLA. +</longdescription> </pkgmetadata> diff --git a/sci-astronomy/eazy/metadata.xml b/sci-astronomy/eazy/metadata.xml index 695876072..66032a84a 100644 --- a/sci-astronomy/eazy/metadata.xml +++ b/sci-astronomy/eazy/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Easy and Accurate Zphot from Yale is a photometric redshift code - designed to produce high-quality redshifts from 0 to 4 for situations - where complete spectroscopic calibration samples are not available. +Easy and Accurate Zphot from Yale is a photometric redshift code +designed to produce high-quality redshifts from 0 to 4 for situations +where complete spectroscopic calibration samples are not available. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/eye/metadata.xml b/sci-astronomy/eye/metadata.xml index 964c66ad9..0bbded1cf 100644 --- a/sci-astronomy/eye/metadata.xml +++ b/sci-astronomy/eye/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - In EyE (Enhance Your Extraction) an artificial neural network - connected to pixels of a moving window (retina) is trained to - associate these input stimuli to the corresponding response in one - or several output image(s). The resulting filter can be loaded in - SExtractor to operate complex, wildly non-linear filters on - astronomical images. Typical applications of EyE include adaptive - filtering, feature detection and cosmetic corrections. +In EyE (Enhance Your Extraction) an artificial neural network +connected to pixels of a moving window (retina) is trained to +associate these input stimuli to the corresponding response in one +or several output image(s). The resulting filter can be loaded in +SExtractor to operate complex, wildly non-linear filters on +astronomical images. Typical applications of EyE include adaptive +filtering, feature detection and cosmetic corrections. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/galfit-bin/metadata.xml b/sci-astronomy/galfit-bin/metadata.xml index 6b4fa6b4a..90190836d 100644 --- a/sci-astronomy/galfit-bin/metadata.xml +++ b/sci-astronomy/galfit-bin/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - GALFIT is a data analysis algorithm that fits 2-D analytic functions - to galaxies and point sources directly to digital images. +GALFIT is a data analysis algorithm that fits 2-D analytic functions +to galaxies and point sources directly to digital images. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/lephare/metadata.xml b/sci-astronomy/lephare/metadata.xml index 508212313..0c2cbc460 100644 --- a/sci-astronomy/lephare/metadata.xml +++ b/sci-astronomy/lephare/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Le Photometric Analysis for Redshift Estimate is a set of commands - to compute photometric redshifts and to perform SED fitting. +Le Photometric Analysis for Redshift Estimate is a set of commands +to compute photometric redshifts and to perform SED fitting. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/missfits/metadata.xml b/sci-astronomy/missfits/metadata.xml index 3115c8d55..136e880c2 100644 --- a/sci-astronomy/missfits/metadata.xml +++ b/sci-astronomy/missfits/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - MissFITS is a program that performs basic maintenance and packaging - tasks on FITS files using an optimised FITS library. MissFITS can: - * add/edit/remove FITS header keywords - * split/join Multi-Extension-FITS (MEF) files - * unpile/pile FITS data-cubes - * create/check/update FITS checksums, using R. Seaman’s protocol. +MissFITS is a program that performs basic maintenance and packaging +tasks on FITS files using an optimised FITS library. MissFITS can: +* add/edit/remove FITS header keywords +* split/join Multi-Extension-FITS (MEF) files +* unpile/pile FITS data-cubes +* create/check/update FITS checksums, using R. Seaman’s protocol. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/mosstack/metadata.xml b/sci-astronomy/mosstack/metadata.xml index 570109a05..2cc9b1528 100644 --- a/sci-astronomy/mosstack/metadata.xml +++ b/sci-astronomy/mosstack/metadata.xml @@ -6,16 +6,16 @@ <name>Mikko Laine</name> </maintainer> <longdescription> - An open source stacking software for astronomical images taken with a DSLR - camera. Mosstack can calibrate, debayer, register, align and stack photos - taken with modern DSLR's from Canon. It has a command line user interface - inspired by AstroSurf IRIS and a graphical user interface written with PyQt4 - </longdescription> +An open source stacking software for astronomical images taken with a DSLR +camera. Mosstack can calibrate, debayer, register, align and stack photos +taken with modern DSLR's from Canon. It has a command line user interface +inspired by AstroSurf IRIS and a graphical user interface written with PyQt4 +</longdescription> <use> <flag name="opencl">Enables OpenCL support and pulls in pyopencl. This makes - some operations much faster but requires specific hardware and drivers.</flag> +some operations much faster but requires specific hardware and drivers.</flag> <flag name="qt4">Pulls in PyQt4. Program works on command line interface - without it but for GUI the library is required.</flag> +without it but for GUI the library is required.</flag> </use> <upstream> <remote-id type="bitbucket">mikko_laine/mosstack</remote-id> diff --git a/sci-astronomy/psfex/metadata.xml b/sci-astronomy/psfex/metadata.xml index 5121f0c8d..e1b68e8d9 100644 --- a/sci-astronomy/psfex/metadata.xml +++ b/sci-astronomy/psfex/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - PSFEx (“PSF Extractor”) extracts models of the Point Spread - Function (PSF) from FITS images processed with <pkg>sci-libs/sextractor</pkg>, and - measures the quality of images. The generated PSF models can be used - for model-fitting photometry or morphological analyses. +PSFEx (“PSF Extractor”) extracts models of the Point Spread +Function (PSF) from FITS images processed with <pkg>sci-libs/sextractor</pkg>, and +measures the quality of images. The generated PSF models can be used +for model-fitting photometry or morphological analyses. </longdescription> <use> <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> diff --git a/sci-astronomy/scamp/metadata.xml b/sci-astronomy/scamp/metadata.xml index 5b8a3c398..d4357bf76 100644 --- a/sci-astronomy/scamp/metadata.xml +++ b/sci-astronomy/scamp/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - SCAMP computes astrometric and photometric solutions from SExtractor catalogs - and stores them in header files. These headers files can be read by SWarp to - coadd images. +SCAMP computes astrometric and photometric solutions from SExtractor catalogs +and stores them in header files. These headers files can be read by SWarp to +coadd images. </longdescription> <use> <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> diff --git a/sci-astronomy/sextractor/metadata.xml b/sci-astronomy/sextractor/metadata.xml index 651b20e47..9564e71e6 100644 --- a/sci-astronomy/sextractor/metadata.xml +++ b/sci-astronomy/sextractor/metadata.xml @@ -6,17 +6,17 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - SExtractor (Source Extractor) is a program that builds a catalogue of - objects from an astronomical image. Although it is particularly - oriented towards reduction of large scale galaxy-survey data, it - performs rather well on moderately crowded star fields. It has the - ability to automatically separate stars and galaxy using neural - networks. +SExtractor (Source Extractor) is a program that builds a catalogue of +objects from an astronomical image. Although it is particularly +oriented towards reduction of large scale galaxy-survey data, it +performs rather well on moderately crowded star fields. It has the +ability to automatically separate stars and galaxy using neural +networks. </longdescription> <use> <flag name="modelfit"> - Enable profile model fitting, needs <pkg>sci-libs/atlas</pkg> - and <pkg>sci-libs/fftw</pkg> +Enable profile model fitting, needs <pkg>sci-libs/atlas</pkg> +and <pkg>sci-libs/fftw</pkg> </flag> </use> </pkgmetadata> diff --git a/sci-astronomy/skymaker/metadata.xml b/sci-astronomy/skymaker/metadata.xml index 18cb8766d..268814ffc 100644 --- a/sci-astronomy/skymaker/metadata.xml +++ b/sci-astronomy/skymaker/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - SkyMaker is a program that simulates astronomical images. It accepts - object lists in ASCII generated by the Stuff program to produce - realistic astronomical fields. There are various options for the user: - build a realistic Point Spread Function, generate a list of stars and - galaxies. Galaxies are modeled analytically. +SkyMaker is a program that simulates astronomical images. It accepts +object lists in ASCII generated by the Stuff program to produce +realistic astronomical fields. There are various options for the user: +build a realistic Point Spread Function, generate a list of stars and +galaxies. Galaxies are modeled analytically. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/starlink-bin/metadata.xml b/sci-astronomy/starlink-bin/metadata.xml index 111f0287a..ef0e61480 100644 --- a/sci-astronomy/starlink-bin/metadata.xml +++ b/sci-astronomy/starlink-bin/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - The Starlink Project, referred to by users as Starlink and by - developers as simply The Project, was a UK astronomical computing - project which supplied general-purpose data reduction - software. +The Starlink Project, referred to by users as Starlink and by +developers as simply The Project, was a UK astronomical computing +project which supplied general-purpose data reduction +software. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/stiff/metadata.xml b/sci-astronomy/stiff/metadata.xml index 1ab3a27af..c100b1037 100644 --- a/sci-astronomy/stiff/metadata.xml +++ b/sci-astronomy/stiff/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - STIFF is a program that convert scientific FITS images to the - more popular TIFF, in 8 (grayscale) or 24 (true colour: 3 times 8) bits per - pixel. +STIFF is a program that convert scientific FITS images to the +more popular TIFF, in 8 (grayscale) or 24 (true colour: 3 times 8) bits per +pixel. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/stilts/metadata.xml b/sci-astronomy/stilts/metadata.xml index 46b14de5c..f2c84722f 100644 --- a/sci-astronomy/stilts/metadata.xml +++ b/sci-astronomy/stilts/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - The Starlink Tables Infrastructure Library Tool Set is a set of - command-line tools based on STIL, the Starlink Tables Infrastructure - Library. It deals with the processing of tabular data; the package - has been designed for, but is not restricted to, astronomical tables - such as object catalogues. Some of the tools are generic and can - work with multiple formats (including FITS, VOTable, CSV, SQL and - ASCII), and others are specific to the VOTable format. +The Starlink Tables Infrastructure Library Tool Set is a set of +command-line tools based on STIL, the Starlink Tables Infrastructure +Library. It deals with the processing of tabular data; the package +has been designed for, but is not restricted to, astronomical tables +such as object catalogues. Some of the tools are generic and can +work with multiple formats (including FITS, VOTable, CSV, SQL and +ASCII), and others are specific to the VOTable format. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/stuff/metadata.xml b/sci-astronomy/stuff/metadata.xml index 5970575e9..ade4c41c5 100644 --- a/sci-astronomy/stuff/metadata.xml +++ b/sci-astronomy/stuff/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Stuff is a program that simulates “perfect” astronomical - catalogues. It generate object lists in ASCII which can read by the - SkyMaker program to produce realistic astronomical fields. +Stuff is a program that simulates “perfect” astronomical +catalogues. It generate object lists in ASCII which can read by the +SkyMaker program to produce realistic astronomical fields. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/swarp/metadata.xml b/sci-astronomy/swarp/metadata.xml index 110a1fe70..209ee5d8f 100644 --- a/sci-astronomy/swarp/metadata.xml +++ b/sci-astronomy/swarp/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - SWarp takes astronomical FITS images with a WCS-like projection, - resample and stack them all. +SWarp takes astronomical FITS images with a WCS-like projection, +resample and stack them all. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/topcat/metadata.xml b/sci-astronomy/topcat/metadata.xml index 4cf0383c9..65b998b7d 100644 --- a/sci-astronomy/topcat/metadata.xml +++ b/sci-astronomy/topcat/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Tool for OPerations on Catalogues And Tables is an interactive - graphical viewer and editor for tabular data. Its aim is to provide - most of the facilities that astronomers need for analysis and - manipulation of source catalogues and other tables, though it can be - used for non-astronomical data as well. It understands a number of - different astronomically important formats (including FITS and - VOTable) and more formats can be added. +Tool for OPerations on Catalogues And Tables is an interactive +graphical viewer and editor for tabular data. Its aim is to provide +most of the facilities that astronomers need for analysis and +manipulation of source catalogues and other tables, though it can be +used for non-astronomical data as well. It understands a number of +different astronomically important formats (including FITS and +VOTable) and more formats can be added. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/weightwatcher/metadata.xml b/sci-astronomy/weightwatcher/metadata.xml index 26af98c3c..8af502859 100644 --- a/sci-astronomy/weightwatcher/metadata.xml +++ b/sci-astronomy/weightwatcher/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - WeightWatcher is a program that combines weight-maps, flag-maps and - polygon data in order to produce control maps which can directly be - used in astronomical image-processing packages like Drizzle, - <pkg>sci-astronomy/sextractor</pkg> or <pkg>sci-astronomy/swarp</pkg>. +WeightWatcher is a program that combines weight-maps, flag-maps and +polygon data in order to produce control maps which can directly be +used in astronomical image-processing packages like Drizzle, +<pkg>sci-astronomy/sextractor</pkg> or <pkg>sci-astronomy/swarp</pkg>. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/zebra/metadata.xml b/sci-astronomy/zebra/metadata.xml index ba10176c2..b9760ac17 100644 --- a/sci-astronomy/zebra/metadata.xml +++ b/sci-astronomy/zebra/metadata.xml @@ -6,20 +6,20 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - The Zurich Extragalactic Bayesian Redshift Analyzer is a software to - compute and analyze photometric redshifts of galaxies. - ZEBRA combines and extends several of the classical approaches to - produce accurate photometric redshifts down to faint magnitudes. In - particular, ZEBRA uses the template-fitting approach to produce - Maximum Likelihood and Bayesian redshift estimates based on: - * An automatic iterative technique to correct the original set of - galaxy templates to best represent the SEDs of real galaxies at - different redshifts; - * A training set of spectroscopic redshifts for a small fraction of - the photometric sample, to improve the robustness of the - photometric redshift estimates; and - * An iterative technique for Bayesian redshift estimates, which - extracts the full two-dimensional redshift and template likelihood - function for each galaxy. +The Zurich Extragalactic Bayesian Redshift Analyzer is a software to +compute and analyze photometric redshifts of galaxies. +ZEBRA combines and extends several of the classical approaches to +produce accurate photometric redshifts down to faint magnitudes. In +particular, ZEBRA uses the template-fitting approach to produce +Maximum Likelihood and Bayesian redshift estimates based on: +* An automatic iterative technique to correct the original set of +galaxy templates to best represent the SEDs of real galaxies at +different redshifts; +* A training set of spectroscopic redshifts for a small fraction of +the photometric sample, to improve the robustness of the +photometric redshift estimates; and +* An iterative technique for Bayesian redshift estimates, which +extracts the full two-dimensional redshift and template likelihood +function for each galaxy. </longdescription> </pkgmetadata> diff --git a/sci-astronomy/zpeg/metadata.xml b/sci-astronomy/zpeg/metadata.xml index 921c2c050..fbf281467 100644 --- a/sci-astronomy/zpeg/metadata.xml +++ b/sci-astronomy/zpeg/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Astronomy Project</name> </maintainer> <longdescription lang="en"> - Z-PEG is a software anybody can use to compute photometric - redshifts. In short, Z-PEG performs a chi square minimization of the - distance between observed photometric bands and synthetic photometry - from galaxies simulated by the evolutionary code PEGASE. +Z-PEG is a software anybody can use to compute photometric +redshifts. In short, Z-PEG performs a chi square minimization of the +distance between observed photometric bands and synthetic photometry +from galaxies simulated by the evolutionary code PEGASE. </longdescription> <use> <flag name="gdl">Install GDL/IDL plotting routines</flag> diff --git a/sci-biology/Atlas2/metadata.xml b/sci-biology/Atlas2/metadata.xml index 7e2e21ffd..7ce5225f5 100644 --- a/sci-biology/Atlas2/metadata.xml +++ b/sci-biology/Atlas2/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Biology Project</name> </maintainer> <longdescription> - Atlas2 is a next-generation sequencing suite of variant analysis - tools specializing in the separation of true SNPs and insertions - and deletions (indels) from sequencing and mapping errors in Whole - Exome Capture Sequencing (WECS) data. - </longdescription> +Atlas2 is a next-generation sequencing suite of variant analysis +tools specializing in the separation of true SNPs and insertions +and deletions (indels) from sequencing and mapping errors in Whole +Exome Capture Sequencing (WECS) data. +</longdescription> <upstream> <remote-id type="sourceforge">downloads</remote-id> </upstream> diff --git a/sci-biology/SPAdes/metadata.xml b/sci-biology/SPAdes/metadata.xml index f1a8d4826..0845ad7a4 100644 --- a/sci-biology/SPAdes/metadata.xml +++ b/sci-biology/SPAdes/metadata.xml @@ -10,8 +10,8 @@ <name>Gentoo Biology Project</name> </maintainer> <longdescription> - truSPAdes includes support for Illumina TruSeq Synthetic Long Read technology reads. - hammer and ionhammer are read error correcting modules for Illumina /IonTorrent reads, resp. - dipspades is assembly module for highly polymorphic diploid genomes - </longdescription> +truSPAdes includes support for Illumina TruSeq Synthetic Long Read technology reads. +hammer and ionhammer are read error correcting modules for Illumina /IonTorrent reads, resp. +dipspades is assembly module for highly polymorphic diploid genomes +</longdescription> </pkgmetadata> diff --git a/sci-biology/aghermann/metadata.xml b/sci-biology/aghermann/metadata.xml index 7d37ce2e8..ff364c93d 100644 --- a/sci-biology/aghermann/metadata.xml +++ b/sci-biology/aghermann/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Biology Project</name> </maintainer> <longdescription> - Aghermann is a program designed around a common workflow in - sleep-research, complete with scoring facility; cairo subpixel - drawing on screen or to file; conventional PSD and EEG Micrcontinuity - profiles; Independent Component Analysis; artifact detection; and - Process S simulation following Achermann et al, 1993. - </longdescription> +Aghermann is a program designed around a common workflow in +sleep-research, complete with scoring facility; cairo subpixel +drawing on screen or to file; conventional PSD and EEG Micrcontinuity +profiles; Independent Component Analysis; artifact detection; and +Process S simulation following Achermann et al, 1993. +</longdescription> </pkgmetadata> diff --git a/sci-biology/amos/metadata.xml b/sci-biology/amos/metadata.xml index 5c72bf01a..ddba4784f 100644 --- a/sci-biology/amos/metadata.xml +++ b/sci-biology/amos/metadata.xml @@ -14,7 +14,7 @@ AMOS is collection of tools and class interfaces for the assembly of DNA sequencing reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation - </longdescription> +</longdescription> <upstream> <remote-id type="sourceforge">amos</remote-id> </upstream> diff --git a/sci-biology/ants/metadata.xml b/sci-biology/ants/metadata.xml index 6f359a5c0..e55eec26d 100644 --- a/sci-biology/ants/metadata.xml +++ b/sci-biology/ants/metadata.xml @@ -12,5 +12,5 @@ toolkit. ANTsR is an emerging tool supporting standardized multimodality image a on the Insight ToolKit (ITK), a widely used medical image processing library to which ANTs developers contribute. - </longdescription> +</longdescription> </pkgmetadata> diff --git a/sci-biology/autoeditor/metadata.xml b/sci-biology/autoeditor/metadata.xml index af250f1f8..a9237cbcc 100644 --- a/sci-biology/autoeditor/metadata.xml +++ b/sci-biology/autoeditor/metadata.xml @@ -10,16 +10,16 @@ <name>Gentoo Biology Project</name> </maintainer> <longdescription>AutoEditor is a program that can automatically correct discrepancies in a - multiple alignment by reanalyzing the chromatograms of the discrepant bases. - The input to AutoEditor is the multiple alignment in contig form, the sequence - and quality values in FASTA format, and the base call positions in - "SEQNAME basecallpositions\n" format where the basecall positions are written - in hex (4 nibbles per basecall position) concatentated together. The path - to the chromatograms for the sequences should be specified with the -c option. - More help is available with -h. +multiple alignment by reanalyzing the chromatograms of the discrepant bases. +The input to AutoEditor is the multiple alignment in contig form, the sequence +and quality values in FASTA format, and the base call positions in +"SEQNAME basecallpositions\n" format where the basecall positions are written +in hex (4 nibbles per basecall position) concatentated together. The path +to the chromatograms for the sequences should be specified with the -c option. +More help is available with -h. - The output is to a timestamped autoEditor directory that has the input files - edited along with other TIGR specific file formats. Sample input data is - provided with the distribution in the sample directory. - </longdescription> +The output is to a timestamped autoEditor directory that has the input files +edited along with other TIGR specific file formats. Sample input data is +provided with the distribution in the sample directory. +</longdescription> </pkgmetadata> diff --git a/sci-biology/biobambam/metadata.xml b/sci-biology/biobambam/metadata.xml index 25aa7fc17..782a697ab 100644 --- a/sci-biology/biobambam/metadata.xml +++ b/sci-biology/biobambam/metadata.xml @@ -14,7 +14,7 @@ bammaskflags: reads BAM and writes BAM while masking (removing) bits from the fl bamrecompress: reads BAM and writes BAM with a defined compression setting. This tool is capable of multi-threading. bamsort: reads BAM and writes BAM resorted by coordinates or query name bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name - </longdescription> +</longdescription> <upstream> <remote-id type="github">gt1/biobambam</remote-id> </upstream> diff --git a/sci-biology/biobambam2/metadata.xml b/sci-biology/biobambam2/metadata.xml index 88dabed5a..e22b824df 100644 --- a/sci-biology/biobambam2/metadata.xml +++ b/sci-biology/biobambam2/metadata.xml @@ -14,7 +14,7 @@ bammaskflags: reads BAM and writes BAM while masking (removing) bits from the fl bamrecompress: reads BAM and writes BAM with a defined compression setting. This tool is capable of multi-threading. bamsort: reads BAM and writes BAM resorted by coordinates or query name bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name - </longdescription> +</longdescription> <upstream> <remote-id type="github">gt1/biobambam2</remote-id> </upstream> diff --git a/sci-biology/bismark/metadata.xml b/sci-biology/bismark/metadata.xml index 7fbe43fac..4c433a8ca 100644 --- a/sci-biology/bismark/metadata.xml +++ b/sci-biology/bismark/metadata.xml @@ -19,5 +19,5 @@ features are: (1) Bisulfite mapping and methylation calling in one single step; and gapped alignments; (4) Alignment seed length, number of mismatches etc. are adjustable; (5) Output discriminates between cytosine methylation in CpG, CHG and CHH context. - </longdescription> +</longdescription> </pkgmetadata> diff --git a/sci-biology/bru2nii/metadata.xml b/sci-biology/bru2nii/metadata.xml index 65fc7e751..30f63e57e 100644 --- a/sci-biology/bru2nii/metadata.xml +++ b/sci-biology/bru2nii/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - This is a simple tool for converting Bruker ParaVision MRI data to - the NIfTI file format. It includes both a drag-and-drop graphical - interface (Bru2Nii) as well as a command line tool (Bru2). - </longdescription> +This is a simple tool for converting Bruker ParaVision MRI data to +the NIfTI file format. It includes both a drag-and-drop graphical +interface (Bru2Nii) as well as a command line tool (Bru2). +</longdescription> <upstream> <remote-id type="github">neurolabusc/Bru2Nii</remote-id> </upstream> diff --git a/sci-biology/caftools/metadata.xml b/sci-biology/caftools/metadata.xml index ebb2f204c..224641279 100644 --- a/sci-biology/caftools/metadata.xml +++ b/sci-biology/caftools/metadata.xml @@ -10,8 +10,8 @@ <name>Gentoo Biology Project</name> </maintainer> <longdescription> - CAF is a text format for describing sequence assemblies. It is acedb-compliant - and is an extension of the ace-file format used earlier, but with support for - base quality measures and a more extensive description of the Sequence data. - </longdescription> +CAF is a text format for describing sequence assemblies. It is acedb-compliant +and is an extension of the ace-file format used earlier, but with support for +base quality measures and a more extensive description of the Sequence data. +</longdescription> </pkgmetadata> diff --git a/sci-biology/cd-hit/metadata.xml b/sci-biology/cd-hit/metadata.xml index 95aec8089..4112e9551 100644 --- a/sci-biology/cd-hit/metadata.xml +++ b/sci-biology/cd-hit/metadata.xml @@ -19,7 +19,7 @@ datasets and identifies the sequences in db2 that are similar to db1 above a threshold. CD-HIT-454 is a program to identify natural and artificial duplicates from pyrosequencing reads. The usage of other programs and scripts can be found in CD-HIT user's guide. - </longdescription> +</longdescription> <upstream> <remote-id type="github">weizhongli/cdhit</remote-id> </upstream> diff --git a/sci-biology/cnrun/metadata.xml b/sci-biology/cnrun/metadata.xml index 7e97ca658..2ebacbc5f 100644 --- a/sci-biology/cnrun/metadata.xml +++ b/sci-biology/cnrun/metadata.xml @@ -10,23 +10,23 @@ <name>Gentoo Biology Project</name> </maintainer> <longdescription> - CNrun is a neuronal network simulator, with these features: +CNrun is a neuronal network simulator, with these features: - * a conductance- and rate-based Hodgkin-Huxley neurons, a Rall and - Alpha-Beta synapses; - * a 6-5 Runge-Kutta integration method: slow but precise, adjustable; - * Poisson, Van der Pol, Colpitts oscillators and interface for - external stimulation sources; - * NeuroML network topology import/export; - * logging state variables, spikes; - * implemented as a Lua module, for scripting model behaviour (e.g., - to enable plastic processes regulated by model state); - * interaction (topology push/pull, async connections) with other - cnrun models running elsewhere on a network, with interactions - (planned). +* a conductance- and rate-based Hodgkin-Huxley neurons, a Rall and +Alpha-Beta synapses; +* a 6-5 Runge-Kutta integration method: slow but precise, adjustable; +* Poisson, Van der Pol, Colpitts oscillators and interface for +external stimulation sources; +* NeuroML network topology import/export; +* logging state variables, spikes; +* implemented as a Lua module, for scripting model behaviour (e.g., +to enable plastic processes regulated by model state); +* interaction (topology push/pull, async connections) with other +cnrun models running elsewhere on a network, with interactions +(planned). - Note that there is no `cnrun' executable, which existed in cnrun-1.*. - Instead, you write a script for your simulation in Lua, and execute - it as detailed in /usr/share/lua-cnrun/examples/example1.lua. - </longdescription> +Note that there is no `cnrun' executable, which existed in cnrun-1.*. +Instead, you write a script for your simulation in Lua, and execute +it as detailed in /usr/share/lua-cnrun/examples/example1.lua. +</longdescription> </pkgmetadata> diff --git a/sci-biology/dipy/metadata.xml b/sci-biology/dipy/metadata.xml index de88739b5..e198cb853 100644 --- a/sci-biology/dipy/metadata.xml +++ b/sci-biology/dipy/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Dipy is a free and open source software project for computational neuroanatomy, focusing mainly on - diffusion magnetic resonance imaging (dMRI) analysis. It implements a broad range of algorithms for - denoising, registration, reconstruction, tracking, clustering, visualization, and statistical - analysis of MRI data. - </longdescription> +Dipy is a free and open source software project for computational neuroanatomy, focusing mainly on +diffusion magnetic resonance imaging (dMRI) analysis. It implements a broad range of algorithms for +denoising, registration, reconstruction, tracking, clustering, visualization, and statistical +analysis of MRI data. +</longdescription> <upstream> <remote-id type="github">nipy/dipy</remote-id> </upstream> diff --git a/sci-biology/discrover/metadata.xml b/sci-biology/discrover/metadata.xml index 90c7c21bc..6f5916ea8 100644 --- a/sci-biology/discrover/metadata.xml +++ b/sci-biology/discrover/metadata.xml @@ -7,20 +7,20 @@ </maintainer> <use> <flag name="cairo"> - Use Cairo for sequence logo plotting capabilities - </flag> +Use Cairo for sequence logo plotting capabilities +</flag> <flag name="dreme"> - Enable usage of DREME from the MEME package for seeding - </flag> +Enable usage of DREME from the MEME package for seeding +</flag> <flag name="lto"> - Compile with link-time optimization (LTO) - </flag> +Compile with link-time optimization (LTO) +</flag> <flag name="misc_scripts"> - Install miscellaneous scripts - </flag> +Install miscellaneous scripts +</flag> <flag name="rmathlib"> - Link to the standalone Rmathlib for statistical routines - </flag> +Link to the standalone Rmathlib for statistical routines +</flag> </use> <upstream> <remote-id type="github">maaskola/discrover</remote-id> diff --git a/sci-biology/nilearn/metadata.xml b/sci-biology/nilearn/metadata.xml index 983b74350..2010f6625 100644 --- a/sci-biology/nilearn/metadata.xml +++ b/sci-biology/nilearn/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Nilearn is a Python module for fast and easy statistical learning on NeuroImaging data. - It leverages the scikit-learn Python toolbox for multivariate statistics with applications - such as predictive modelling, classification, decoding, or connectivity analysis. - </longdescription> +Nilearn is a Python module for fast and easy statistical learning on NeuroImaging data. +It leverages the scikit-learn Python toolbox for multivariate statistics with applications +such as predictive modelling, classification, decoding, or connectivity analysis. +</longdescription> <use> <flag name="plot">Adds optional dependency needed for plotting function subset.</flag> </use> diff --git a/sci-biology/nireg/metadata.xml b/sci-biology/nireg/metadata.xml index 0885cf813..d6592a893 100644 --- a/sci-biology/nireg/metadata.xml +++ b/sci-biology/nireg/metadata.xml @@ -10,6 +10,6 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Nireg is a package for nytive-python image registration. - </longdescription> +Nireg is a package for nytive-python image registration. +</longdescription> </pkgmetadata> diff --git a/sci-biology/nistats/metadata.xml b/sci-biology/nistats/metadata.xml index b438f4409..5b04d23d9 100644 --- a/sci-biology/nistats/metadata.xml +++ b/sci-biology/nistats/metadata.xml @@ -10,7 +10,7 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Nistats is a Python module for fast and easy modeling and statistical analysis of - functional Magnetic Resonance Imaging data. +Nistats is a Python module for fast and easy modeling and statistical analysis of +functional Magnetic Resonance Imaging data. </longdescription> </pkgmetadata> diff --git a/sci-biology/nitime/metadata.xml b/sci-biology/nitime/metadata.xml index 549788bdf..a09589ab6 100644 --- a/sci-biology/nitime/metadata.xml +++ b/sci-biology/nitime/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Nitime is a library for time-series analysis of data from neuroscience experiments - in both the time and spectral domains. - </longdescription> +Nitime is a library for time-series analysis of data from neuroscience experiments +in both the time and spectral domains. +</longdescription> <upstream> <remote-id type="github">nipy/nitime</remote-id> </upstream> diff --git a/sci-chemistry/drawxtl/metadata.xml b/sci-chemistry/drawxtl/metadata.xml index fe7f76183..37be5d841 100644 --- a/sci-chemistry/drawxtl/metadata.xml +++ b/sci-chemistry/drawxtl/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription lang="en"> - This software can be used to produce crystal structure drawings from structural - data. +This software can be used to produce crystal structure drawings from structural +data. </longdescription> </pkgmetadata> diff --git a/sci-chemistry/erkale/metadata.xml b/sci-chemistry/erkale/metadata.xml index 8c2fec457..eea62e858 100644 --- a/sci-chemistry/erkale/metadata.xml +++ b/sci-chemistry/erkale/metadata.xml @@ -9,13 +9,13 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription lang="en"> - ERKALE is a quantum chemistry program used to solve the electronic - structure of atoms, molecules and molecular clusters. It was developed at - the University of Helsinki, and is currently developed at Aalto University. +ERKALE is a quantum chemistry program used to solve the electronic +structure of atoms, molecules and molecular clusters. It was developed at +the University of Helsinki, and is currently developed at Aalto University. - The main use of ERKALE is the computation of x-ray properties, such as - ground-state electron momentum densities and Compton profiles, and core - (x-ray absorption and x-ray Raman scattering) and valence electron - excitation spectra of atoms and molecules. - </longdescription> +The main use of ERKALE is the computation of x-ray properties, such as +ground-state electron momentum densities and Compton profiles, and core +(x-ray absorption and x-ray Raman scattering) and valence electron +excitation spectra of atoms and molecules. +</longdescription> </pkgmetadata> diff --git a/sci-chemistry/freeon/metadata.xml b/sci-chemistry/freeon/metadata.xml index 8f4e98e7e..79f403367 100644 --- a/sci-chemistry/freeon/metadata.xml +++ b/sci-chemistry/freeon/metadata.xml @@ -2,8 +2,8 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription lang="en"> - FreeON is an experimental, open source (GPL) suite of programs for linear scaling quantum chemistry. - </longdescription> +FreeON is an experimental, open source (GPL) suite of programs for linear scaling quantum chemistry. +</longdescription> <maintainer type="person"> <email>nicolasbock@gentoo.org</email> <name>Nicolas Bock</name> diff --git a/sci-chemistry/gnome-chemistry-utils/metadata.xml b/sci-chemistry/gnome-chemistry-utils/metadata.xml index 5a8da44f4..c6cbb8582 100644 --- a/sci-chemistry/gnome-chemistry-utils/metadata.xml +++ b/sci-chemistry/gnome-chemistry-utils/metadata.xml @@ -2,9 +2,9 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription lang="en"> - The Gnome Chemistry Utils provide some programs and library containing - GTK widgets and some C++ classes related to chemistry. - </longdescription> +The Gnome Chemistry Utils provide some programs and library containing +GTK widgets and some C++ classes related to chemistry. +</longdescription> <use> <flag name="gnumeric">Build pluging for gnumeric</flag> </use> diff --git a/sci-chemistry/nwchem/metadata.xml b/sci-chemistry/nwchem/metadata.xml index 5d5f4cd5e..61993bb4b 100644 --- a/sci-chemistry/nwchem/metadata.xml +++ b/sci-chemistry/nwchem/metadata.xml @@ -11,24 +11,24 @@ </maintainer> <use> <flag name="blas"> - Use external BLAS library instead of the internal routines - </flag> +Use external BLAS library instead of the internal routines +</flag> <flag name="cuda"> - Enable CUDA GPU support for the Tensor Contraction Engine generated - methods (CI, MBPT, CC) - </flag> +Enable CUDA GPU support for the Tensor Contraction Engine generated +methods (CI, MBPT, CC) +</flag> <flag name="int64"> - Use 64 bits integers - </flag> +Use 64 bits integers +</flag> <flag name="lapack"> - Use external LAPACK library instead of the internal routines - </flag> +Use external LAPACK library instead of the internal routines +</flag> <flag name="mrcc"> - Compile the routines for Multi Reference Coupled Clusters theory - </flag> +Compile the routines for Multi Reference Coupled Clusters theory +</flag> <flag name="nwchem-tests">Install qa tests data</flag> <flag name="scalapack"> - Use external SCALAPACK library - </flag> +Use external SCALAPACK library +</flag> </use> </pkgmetadata> diff --git a/sci-chemistry/openbabel-java/metadata.xml b/sci-chemistry/openbabel-java/metadata.xml index 4298a22b6..2a1736c4d 100644 --- a/sci-chemistry/openbabel-java/metadata.xml +++ b/sci-chemistry/openbabel-java/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - Open Babel is a chemical toolbox designed to speak the many languages of - chemical data. It's an open, collaborative project allowing anyone to - search, convert, analyze, or store data from molecular modeling, chemistry, - solid-state materials, biochemistry, or related areas. This package enables - to access Open Babel library from Java (Scala, etc.) programs. - </longdescription> +Open Babel is a chemical toolbox designed to speak the many languages of +chemical data. It's an open, collaborative project allowing anyone to +search, convert, analyze, or store data from molecular modeling, chemistry, +solid-state materials, biochemistry, or related areas. This package enables +to access Open Babel library from Java (Scala, etc.) programs. +</longdescription> <upstream> <remote-id type="sourceforge">openbabel</remote-id> </upstream> diff --git a/sci-chemistry/openbabel-perl/metadata.xml b/sci-chemistry/openbabel-perl/metadata.xml index a33d79672..3dc4c5711 100644 --- a/sci-chemistry/openbabel-perl/metadata.xml +++ b/sci-chemistry/openbabel-perl/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - Open Babel is a chemical toolbox designed to speak the many languages of - chemical data. It's an open, collaborative project allowing anyone to - search, convert, analyze, or store data from molecular modeling, chemistry, - solid-state materials, biochemistry, or related areas. - This package enables to access Open Babel library from Perl programs. - </longdescription> +Open Babel is a chemical toolbox designed to speak the many languages of +chemical data. It's an open, collaborative project allowing anyone to +search, convert, analyze, or store data from molecular modeling, chemistry, +solid-state materials, biochemistry, or related areas. +This package enables to access Open Babel library from Perl programs. +</longdescription> <upstream> <remote-id type="sourceforge">openbabel</remote-id> </upstream> diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml index c7b4a91d5..1acf891c7 100644 --- a/sci-chemistry/openbabel-python/metadata.xml +++ b/sci-chemistry/openbabel-python/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - Open Babel is a chemical toolbox designed to speak the many languages of - chemical data. It's an open, collaborative project allowing anyone to - search, convert, analyze, or store data from molecular modeling, chemistry, - solid-state materials, biochemistry, or related areas. This package enables - to access Open Babel library from Python programs. - </longdescription> +Open Babel is a chemical toolbox designed to speak the many languages of +chemical data. It's an open, collaborative project allowing anyone to +search, convert, analyze, or store data from molecular modeling, chemistry, +solid-state materials, biochemistry, or related areas. This package enables +to access Open Babel library from Python programs. +</longdescription> <upstream> <remote-id type="sourceforge">openbabel</remote-id> </upstream> diff --git a/sci-chemistry/openbabel-ruby/metadata.xml b/sci-chemistry/openbabel-ruby/metadata.xml index 3a3af58ab..cc3c28852 100644 --- a/sci-chemistry/openbabel-ruby/metadata.xml +++ b/sci-chemistry/openbabel-ruby/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - Open Babel is a chemical toolbox designed to speak the many languages of - chemical data. It's an open, collaborative project allowing anyone to - search, convert, analyze, or store data from molecular modeling, chemistry, - solid-state materials, biochemistry, or related areas. This package enables - to access Open Babel library from Ruby programs. - </longdescription> +Open Babel is a chemical toolbox designed to speak the many languages of +chemical data. It's an open, collaborative project allowing anyone to +search, convert, analyze, or store data from molecular modeling, chemistry, +solid-state materials, biochemistry, or related areas. This package enables +to access Open Babel library from Ruby programs. +</longdescription> <upstream> <remote-id type="sourceforge">openbabel</remote-id> </upstream> diff --git a/sci-chemistry/openbabel/metadata.xml b/sci-chemistry/openbabel/metadata.xml index 3566de64c..1b001391d 100644 --- a/sci-chemistry/openbabel/metadata.xml +++ b/sci-chemistry/openbabel/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - Open Babel is a chemical toolbox designed to speak the many languages of - chemical data. It's an open, collaborative project allowing anyone to - search, convert, analyze, or store data from molecular modeling, chemistry, - solid-state materials, biochemistry, or related areas. - </longdescription> +Open Babel is a chemical toolbox designed to speak the many languages of +chemical data. It's an open, collaborative project allowing anyone to +search, convert, analyze, or store data from molecular modeling, chemistry, +solid-state materials, biochemistry, or related areas. +</longdescription> <use> <flag name="doc">Install API dicumentation.</flag> <flag name="openmp">Enable parallelization using OpenMP.</flag> diff --git a/sci-chemistry/panav/metadata.xml b/sci-chemistry/panav/metadata.xml index 694fe0a9f..ce2056e66 100644 --- a/sci-chemistry/panav/metadata.xml +++ b/sci-chemistry/panav/metadata.xml @@ -26,8 +26,8 @@ protocol, which is based on using residue-specific and secondary structure-specific chemical shift distributions calculated over small (3–6 residue) fragments to identify mis-assigned resonances. The method is also able to identify and re-reference mis-referenced chemical shift - assignments. Comparisons against existing re-referencing or mis-assignment - detection programs show that the method is as good or superior to existing - approaches. +assignments. Comparisons against existing re-referencing or mis-assignment +detection programs show that the method is as good or superior to existing +approaches. </longdescription> </pkgmetadata> diff --git a/sci-chemistry/pymol-plugins-ezviz/metadata.xml b/sci-chemistry/pymol-plugins-ezviz/metadata.xml index 0dff1c081..a534b14c2 100644 --- a/sci-chemistry/pymol-plugins-ezviz/metadata.xml +++ b/sci-chemistry/pymol-plugins-ezviz/metadata.xml @@ -9,14 +9,14 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - EZ-Viz was developed as an assistance tool for the difficult to - understand user interface of PyMOL. The standard interface is - very complex takes a long time to learn, especially for students - unfamiliar with the chemistry and busy researchers with little - time to learn the commands necessary to use the PyMOL software - to its full extent. EZ-Viz allows for users to navigate through - PyMOL using a series of clickable buttons and tabs to complete - all functions of the PyMol software without ever having to type - a single command. +EZ-Viz was developed as an assistance tool for the difficult to +understand user interface of PyMOL. The standard interface is +very complex takes a long time to learn, especially for students +unfamiliar with the chemistry and busy researchers with little +time to learn the commands necessary to use the PyMOL software +to its full extent. EZ-Viz allows for users to navigate through +PyMOL using a series of clickable buttons and tabs to complete +all functions of the PyMol software without ever having to type +a single command. </longdescription> </pkgmetadata> diff --git a/sci-chemistry/shiftx2/metadata.xml b/sci-chemistry/shiftx2/metadata.xml index 6fee17f87..e35d2bc02 100644 --- a/sci-chemistry/shiftx2/metadata.xml +++ b/sci-chemistry/shiftx2/metadata.xml @@ -6,36 +6,36 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - SHIFTX2 predicts both the backbone and side chain 1H, 13C and 15N chemical - shifts for proteins using their structural (PDB) coordinates as input. - SHIFTX2 combines ensemble machine learning methods with sequence - alignment-based methods to calculate protein chemical shifts for - backbone - and side chain atoms. SHIFTX2 has been trained on a carefully selected - set of - 197 proteins and tested on a separate set of 61 proteins. Both the - training - and testing sets consisted of high resolution X-ray structures (less - 2.1A) - with carefully verified chemical shifts assignments. SHIFTX2 is able to - attain - correlation coefficients between experimentally observed and predicted - backbone chemical shifts of 0.9800 (15N), 0.9959 (13CA), 0.9992 (13CB), - 0.9676 (13CO), 0.9714 (1HN), 0.9744 (1HA) and RMS errors of 1.1169, 0.4412, - 0.5163, 0.5330, 0.1711, and 0.1231 ppm, respectively. Comparisons to - other - chemical shift predictors using the same testing data set indicates that - SHIFTX2 is substantially more accurate (up to 26% better by - correlation - coefficient with an RMS error that is up to 3.3X smaller) than any other - program. +SHIFTX2 predicts both the backbone and side chain 1H, 13C and 15N chemical +shifts for proteins using their structural (PDB) coordinates as input. +SHIFTX2 combines ensemble machine learning methods with sequence +alignment-based methods to calculate protein chemical shifts for +backbone +and side chain atoms. SHIFTX2 has been trained on a carefully selected +set of +197 proteins and tested on a separate set of 61 proteins. Both the +training +and testing sets consisted of high resolution X-ray structures (less +2.1A) +with carefully verified chemical shifts assignments. SHIFTX2 is able to +attain +correlation coefficients between experimentally observed and predicted +backbone chemical shifts of 0.9800 (15N), 0.9959 (13CA), 0.9992 (13CB), +0.9676 (13CO), 0.9714 (1HN), 0.9744 (1HA) and RMS errors of 1.1169, 0.4412, +0.5163, 0.5330, 0.1711, and 0.1231 ppm, respectively. Comparisons to +other +chemical shift predictors using the same testing data set indicates that +SHIFTX2 is substantially more accurate (up to 26% better by +correlation +coefficient with an RMS error that is up to 3.3X smaller) than any other +program. - Please cite the following: Beomsoo Han, Yifeng Liu, Simon Ginzinger, and - David Wishart. (2011) SHIFTX2: significantly improved protein chemical - shift - prediction. Journal of Biomolecular NMR, Volume 50, Number 1, 43-57. - doi: 10.1007/s10858-011-9478-4. - </longdescription> +Please cite the following: Beomsoo Han, Yifeng Liu, Simon Ginzinger, and +David Wishart. (2011) SHIFTX2: significantly improved protein chemical +shift +prediction. Journal of Biomolecular NMR, Volume 50, Number 1, 43-57. +doi: 10.1007/s10858-011-9478-4. +</longdescription> <use> <flag name="debug">Enables debug output in the shiftx2 java part</flag> </use> diff --git a/sci-chemistry/wxmacmolplt/metadata.xml b/sci-chemistry/wxmacmolplt/metadata.xml index 40ac1e07c..fdedec61f 100644 --- a/sci-chemistry/wxmacmolplt/metadata.xml +++ b/sci-chemistry/wxmacmolplt/metadata.xml @@ -6,16 +6,16 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - wxMacMolPlt is a program for plotting 3D molecular structures and normal - modes (vibrations), various orbitals and electron density maps. It reads a - variety of file formats including any GAMESS input, log or IRC file - directly to create animations. It has a simple GAMESS input (.inp) builder - and a primitive molecule builder. - </longdescription> +wxMacMolPlt is a program for plotting 3D molecular structures and normal +modes (vibrations), various orbitals and electron density maps. It reads a +variety of file formats including any GAMESS input, log or IRC file +directly to create animations. It has a simple GAMESS input (.inp) builder +and a primitive molecule builder. +</longdescription> <use> <flag name="flash"> - Add support for flash movie generation using <pkg>media-libs/ming</pkg> - </flag> +Add support for flash movie generation using <pkg>media-libs/ming</pkg> +</flag> </use> <upstream> <remote-id type="github">brettbode/wxmacmolplt</remote-id> diff --git a/sci-geosciences/pydap/metadata.xml b/sci-geosciences/pydap/metadata.xml index aa3cb8c7d..21edfa452 100644 --- a/sci-geosciences/pydap/metadata.xml +++ b/sci-geosciences/pydap/metadata.xml @@ -11,7 +11,7 @@ </maintainer> <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. - </longdescription> +</longdescription> <upstream> <remote-id type="pypi">Pydap</remote-id> </upstream> diff --git a/sci-geosciences/pydap_handlers_csv/metadata.xml b/sci-geosciences/pydap_handlers_csv/metadata.xml index a34c29f27..065b999bf 100644 --- a/sci-geosciences/pydap_handlers_csv/metadata.xml +++ b/sci-geosciences/pydap_handlers_csv/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_handlers_csv allows Pydap server to serve CSV formatted files. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_handlers_csv allows Pydap server to serve CSV formatted files. +</longdescription> <upstream> <remote-id type="pypi">pydap.handlers.csv</remote-id> </upstream> diff --git a/sci-geosciences/pydap_handlers_hdf5/metadata.xml b/sci-geosciences/pydap_handlers_hdf5/metadata.xml index d263e9011..62c4ab0ec 100644 --- a/sci-geosciences/pydap_handlers_hdf5/metadata.xml +++ b/sci-geosciences/pydap_handlers_hdf5/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_handlers_hdf5 allows Pydap server to serve hdf5 formatted files. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_handlers_hdf5 allows Pydap server to serve hdf5 formatted files. +</longdescription> <upstream> <remote-id type="pypi">pydap.handlers.hdf5</remote-id> </upstream> diff --git a/sci-geosciences/pydap_handlers_nca/metadata.xml b/sci-geosciences/pydap_handlers_nca/metadata.xml index bdbf6ec0b..472b4eb86 100644 --- a/sci-geosciences/pydap_handlers_nca/metadata.xml +++ b/sci-geosciences/pydap_handlers_nca/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_handlers_nca allows Pydap server to serve aggregated NetCDF formatted files. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_handlers_nca allows Pydap server to serve aggregated NetCDF formatted files. +</longdescription> <upstream> <remote-id type="pypi">pydap.handlers.nca</remote-id> </upstream> diff --git a/sci-geosciences/pydap_handlers_netcdf/metadata.xml b/sci-geosciences/pydap_handlers_netcdf/metadata.xml index 5ad5d48a7..542600cfe 100644 --- a/sci-geosciences/pydap_handlers_netcdf/metadata.xml +++ b/sci-geosciences/pydap_handlers_netcdf/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_handlers_netcdf allows Pydap server to serve NetCDF formatted files. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_handlers_netcdf allows Pydap server to serve NetCDF formatted files. +</longdescription> <upstream> <remote-id type="pypi">pydap.handlers.netcdf</remote-id> </upstream> diff --git a/sci-geosciences/pydap_handlers_proxy/metadata.xml b/sci-geosciences/pydap_handlers_proxy/metadata.xml index 52278b45f..0f68ac6d7 100644 --- a/sci-geosciences/pydap_handlers_proxy/metadata.xml +++ b/sci-geosciences/pydap_handlers_proxy/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_handlers_proxy allows Pydap server to serve data from other web sites. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_handlers_proxy allows Pydap server to serve data from other web sites. +</longdescription> <upstream> <remote-id type="pypi">pydap.handlers.proxy</remote-id> </upstream> diff --git a/sci-geosciences/pydap_handlers_sqlite/metadata.xml b/sci-geosciences/pydap_handlers_sqlite/metadata.xml index f82089bd9..a533b0703 100644 --- a/sci-geosciences/pydap_handlers_sqlite/metadata.xml +++ b/sci-geosciences/pydap_handlers_sqlite/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_handlers_sqlite allows Pydap server to serve data from SQLite files. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_handlers_sqlite allows Pydap server to serve data from SQLite files. +</longdescription> <upstream> <remote-id type="pypi">pydap.handlers.sqlite</remote-id> </upstream> diff --git a/sci-geosciences/pydap_responses_kml/metadata.xml b/sci-geosciences/pydap_responses_kml/metadata.xml index 8eb4a652f..e9acccf5f 100644 --- a/sci-geosciences/pydap_responses_kml/metadata.xml +++ b/sci-geosciences/pydap_responses_kml/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_responses_kml allows Pydap server to use Google Earth to visualize - data. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_responses_kml allows Pydap server to use Google Earth to visualize +data. +</longdescription> <upstream> <remote-id type="pypi">pydap.responses.kml</remote-id> </upstream> diff --git a/sci-geosciences/pydap_responses_matlab/metadata.xml b/sci-geosciences/pydap_responses_matlab/metadata.xml index 323abf1c2..5370903f5 100644 --- a/sci-geosciences/pydap_responses_matlab/metadata.xml +++ b/sci-geosciences/pydap_responses_matlab/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_responses_matlab allows Pydap server to deliver data to Matlab. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_responses_matlab allows Pydap server to deliver data to Matlab. +</longdescription> <upstream> <remote-id type="pypi">pydap.responses.matlab</remote-id> </upstream> diff --git a/sci-geosciences/pydap_responses_netcdf/metadata.xml b/sci-geosciences/pydap_responses_netcdf/metadata.xml index 25cbef43d..da0f64af0 100644 --- a/sci-geosciences/pydap_responses_netcdf/metadata.xml +++ b/sci-geosciences/pydap_responses_netcdf/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_responses_netcdf allows Pydap server to serve NetCDF formatted files. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_responses_netcdf allows Pydap server to serve NetCDF formatted files. +</longdescription> <upstream> <remote-id type="pypi">pydap.responses.netcdf</remote-id> </upstream> diff --git a/sci-geosciences/pydap_responses_wms/metadata.xml b/sci-geosciences/pydap_responses_wms/metadata.xml index a980f0ad8..ac0d9ed30 100644 --- a/sci-geosciences/pydap_responses_wms/metadata.xml +++ b/sci-geosciences/pydap_responses_wms/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_responses_wms allows Pydap server to deliver maps via Web Mapping - Service protocol. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_responses_wms allows Pydap server to deliver maps via Web Mapping +Service protocol. +</longdescription> <upstream> <remote-id type="pypi">pydap.responses.wms</remote-id> </upstream> diff --git a/sci-geosciences/pydap_responses_xls/metadata.xml b/sci-geosciences/pydap_responses_xls/metadata.xml index b71bee715..9a1f3e724 100644 --- a/sci-geosciences/pydap_responses_xls/metadata.xml +++ b/sci-geosciences/pydap_responses_xls/metadata.xml @@ -10,10 +10,10 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Pydap is a pure Python library implementing the Data Access Protocol. - pydap_responses_xls allows Pydap server to deliver an Excel file of the - data. - </longdescription> +Pydap is a pure Python library implementing the Data Access Protocol. +pydap_responses_xls allows Pydap server to deliver an Excel file of the +data. +</longdescription> <upstream> <remote-id type="pypi">pydap.responses.xls</remote-id> </upstream> diff --git a/sci-geosciences/qgis/metadata.xml b/sci-geosciences/qgis/metadata.xml index 08f842de1..b2ca3f8c7 100644 --- a/sci-geosciences/qgis/metadata.xml +++ b/sci-geosciences/qgis/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Geosciences Project</name> </maintainer> <longdescription lang="en"> - Quantum GIS (QGIS) is a user friendly Open Source Geographic - Information System (GIS). QGIS supports vector, raster, and database - formats. QGIS lets you browse and create map data on your - computer. It supports many common spatial data formats (e.g. ESRI - ShapeFile, geotiff). QGIS supports plugins to do things like display - tracks from your GPS. +Quantum GIS (QGIS) is a user friendly Open Source Geographic +Information System (GIS). QGIS supports vector, raster, and database +formats. QGIS lets you browse and create map data on your +computer. It supports many common spatial data formats (e.g. ESRI +ShapeFile, geotiff). QGIS supports plugins to do things like display +tracks from your GPS. </longdescription> <use> <flag name="grass">Add support for <pkg>sci-geosciences/grass</pkg></flag> diff --git a/sci-libs/amdlibm/metadata.xml b/sci-libs/amdlibm/metadata.xml index c2d85a590..51af055a9 100644 --- a/sci-libs/amdlibm/metadata.xml +++ b/sci-libs/amdlibm/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - AMD LibM is a software library containing a collection of basic math - functions optimized for x86-64 processor based machines. It provides - many routines from the list of standard C99 math functions. +AMD LibM is a software library containing a collection of basic math +functions optimized for x86-64 processor based machines. It provides +many routines from the list of standard C99 math functions. </longdescription> </pkgmetadata> diff --git a/sci-libs/armadillo/metadata.xml b/sci-libs/armadillo/metadata.xml index 1299b679e..af1c24703 100644 --- a/sci-libs/armadillo/metadata.xml +++ b/sci-libs/armadillo/metadata.xml @@ -6,36 +6,36 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Armadillo is a C++ linear algebra library (matrix maths) aiming - towards a good balance between speed and ease of use. Integer, - floating point and complex numbers are supported, as well as a - subset of trigonometric and statistics functions. Various matrix - decompositions are provided through optional integration with LAPACK - and ATLAS libraries. - A delayed evaluation approach is employed (during compile time) to - combine several operations into one and reduce (or eliminate) the - need for temporaries. This is accomplished through recursive - templates and template meta-programming. - </longdescription> +Armadillo is a C++ linear algebra library (matrix maths) aiming +towards a good balance between speed and ease of use. Integer, +floating point and complex numbers are supported, as well as a +subset of trigonometric and statistics functions. Various matrix +decompositions are provided through optional integration with LAPACK +and ATLAS libraries. +A delayed evaluation approach is employed (during compile time) to +combine several operations into one and reduce (or eliminate) the +need for temporaries. This is accomplished through recursive +templates and template meta-programming. +</longdescription> <use> <flag name="atlas"> - Link with <pkg>sci-libs/atlas</pkg> libraries for cblas and - clapack - </flag> +Link with <pkg>sci-libs/atlas</pkg> libraries for cblas and +clapack +</flag> <flag name="arpack"> - Link with <pkg>sci-libs/arpack</pkg> libraries for eigen decomposition - </flag> +Link with <pkg>sci-libs/arpack</pkg> libraries for eigen decomposition +</flag> <flag name="mkl"> - Use matrix allocation from the Intel MKL <pkg>sci-libs/mkl</pkg> - </flag> +Use matrix allocation from the Intel MKL <pkg>sci-libs/mkl</pkg> +</flag> <flag name="tbb"> - Use matrix allocation from the Threads Building Blocks - <pkg>dev-cpp/tbb</pkg> - </flag> +Use matrix allocation from the Threads Building Blocks +<pkg>dev-cpp/tbb</pkg> +</flag> <flag name="superlu"> - Use SuperLU for sparse linear equation solving - <pkg>sci-libs/superlu</pkg> - </flag> +Use SuperLU for sparse linear equation solving +<pkg>sci-libs/superlu</pkg> +</flag> </use> <upstream> <remote-id type="sourceforge">arma</remote-id> diff --git a/sci-libs/arrayfire/metadata.xml b/sci-libs/arrayfire/metadata.xml index 92f4df681..9048a1aeb 100644 --- a/sci-libs/arrayfire/metadata.xml +++ b/sci-libs/arrayfire/metadata.xml @@ -10,31 +10,31 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - ArrayFire is a high performance software library for parallel - computing with an easy-to-use API. Its array based function set - makes parallel programming simple. ArrayFire's multiple backends - (CUDA, OpenCL and native CPU) make it platform independent and - highly portable. - </longdescription> +ArrayFire is a high performance software library for parallel +computing with an easy-to-use API. Its array based function set +makes parallel programming simple. ArrayFire's multiple backends +(CUDA, OpenCL and native CPU) make it platform independent and +highly portable. +</longdescription> <use> <flag name="cpu"> - Build CPU backend. - </flag> +Build CPU backend. +</flag> <flag name="cuda"> - Build CUDA backend. - </flag> +Build CUDA backend. +</flag> <flag name="opencl"> - Build OpenCL backend. - </flag> +Build OpenCL backend. +</flag> <flag name="nonfree"> - Build ArrayFire nonfree algorithms. - </flag> +Build ArrayFire nonfree algorithms. +</flag> <flag name="graphics"> - Build with Forge graphics. - </flag> +Build with Forge graphics. +</flag> <flag name="unified"> - Build Backend-Independent API. - </flag> +Build Backend-Independent API. +</flag> </use> <upstream> <remote-id type="github">google/googletest</remote-id> diff --git a/sci-libs/asl/metadata.xml b/sci-libs/asl/metadata.xml index 67e30e687..3670ce234 100644 --- a/sci-libs/asl/metadata.xml +++ b/sci-libs/asl/metadata.xml @@ -27,7 +27,7 @@ fields: computational fluid dynamics, virtual sensing, industrial process data validation and reconciliation, image-guided surgery, computer-aided engineering, design space exploration, crystallography, etc. - </longdescription> +</longdescription> <use> <flag name="matlab">Matlab support with <pkg>sci-libs/matio</pkg></flag> </use> diff --git a/sci-libs/atlas/metadata.xml b/sci-libs/atlas/metadata.xml index 545ee570b..616e09a4c 100644 --- a/sci-libs/atlas/metadata.xml +++ b/sci-libs/atlas/metadata.xml @@ -6,13 +6,13 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - ATLAS is an approach for the automatic generation and optimization of - numerical software. Currently ATLAS supplies optimized versions for the - complete set of linear algebra kernels known as the Basic Linear Algebra - Subroutines (BLAS) for both c and F77 interfaces. It can also build - a subset of the linear algebra routine LAPACK library or the full - LAPACK using the reference LAPACK from Netlib. - </longdescription> +ATLAS is an approach for the automatic generation and optimization of +numerical software. Currently ATLAS supplies optimized versions for the +complete set of linear algebra kernels known as the Basic Linear Algebra +Subroutines (BLAS) for both c and F77 interfaces. It can also build +a subset of the linear algebra routine LAPACK library or the full +LAPACK using the reference LAPACK from Netlib. +</longdescription> <use> <flag name="deprecated">Build deprecated routines</flag> <flag name="generic">Build atlas assuming a fairly generic architecture (sse2 for x86, core2 for amd64)</flag> diff --git a/sci-libs/bigdft-abi/metadata.xml b/sci-libs/bigdft-abi/metadata.xml index 9389ce33a..b5efea318 100644 --- a/sci-libs/bigdft-abi/metadata.xml +++ b/sci-libs/bigdft-abi/metadata.xml @@ -15,15 +15,15 @@ to serve as a library for sci-physics/abinit. <use> <flag name="cuda">Enable support for nVidia CUDA</flag> <flag name="etsf_io"> - Enable support for reading and writing the European Theoretical - Spectroscopy facility (ETSF) file format - </flag> +Enable support for reading and writing the European Theoretical +Spectroscopy facility (ETSF) file format +</flag> <flag name="glib"> - Compile with GLib Object System support - </flag> +Compile with GLib Object System support +</flag> <flag name="opencl">Enable support for OpenCL GPU acceleration</flag> <flag name="scalapack"> - Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing - </flag> +Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing +</flag> </use> </pkgmetadata> diff --git a/sci-libs/blas-reference/metadata.xml b/sci-libs/blas-reference/metadata.xml index 28c34164e..17dbcb54a 100644 --- a/sci-libs/blas-reference/metadata.xml +++ b/sci-libs/blas-reference/metadata.xml @@ -6,13 +6,13 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The BLAS (Basic Linear Algebra Subprograms) are high quality "building - block" routines for performing basic vector and matrix operations. Level 1 - BLAS do vector-vector operations, Level 2 BLAS do matrix-vector operations, - and Level 3 BLAS do matrix-matrix operations. Because the BLAS are - efficient, portable, and widely available, they're commonly used in the - development of high quality linear algebra software, LAPACK for - example. This packages implements the reference FORTRAN 77 library. +The BLAS (Basic Linear Algebra Subprograms) are high quality "building +block" routines for performing basic vector and matrix operations. Level 1 +BLAS do vector-vector operations, Level 2 BLAS do matrix-vector operations, +and Level 3 BLAS do matrix-matrix operations. Because the BLAS are +efficient, portable, and widely available, they're commonly used in the +development of high quality linear algebra software, LAPACK for +example. This packages implements the reference FORTRAN 77 library. </longdescription> <use> <flag name="int64">Build the 64 bits integer library</flag> diff --git a/sci-libs/cblas-reference/metadata.xml b/sci-libs/cblas-reference/metadata.xml index 975ef184b..eb9d2972b 100644 --- a/sci-libs/cblas-reference/metadata.xml +++ b/sci-libs/cblas-reference/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The BLAS (Basic Linear Algebra Subprograms) are high quality "building - block" routines for performing basic vector and matrix operations. Level 1 - BLAS do vector-vector operations, Level 2 BLAS do matrix-vector operations, - and Level 3 BLAS do matrix-matrix operations. Because the BLAS are - efficient, portable, and widely available, they're commonly used in the - development of high quality linear algebra software, LAPACK for - example. This packages implements the reference C library as a wrapper - to the FORTRAN 77 BLAS library. +The BLAS (Basic Linear Algebra Subprograms) are high quality "building +block" routines for performing basic vector and matrix operations. Level 1 +BLAS do vector-vector operations, Level 2 BLAS do matrix-vector operations, +and Level 3 BLAS do matrix-matrix operations. Because the BLAS are +efficient, portable, and widely available, they're commonly used in the +development of high quality linear algebra software, LAPACK for +example. This packages implements the reference C library as a wrapper +to the FORTRAN 77 BLAS library. </longdescription> <use> <flag name="int64">Build the 64 bits integer library</flag> diff --git a/sci-libs/clblas/metadata.xml b/sci-libs/clblas/metadata.xml index 0af0653f6..3aec2f51f 100644 --- a/sci-libs/clblas/metadata.xml +++ b/sci-libs/clblas/metadata.xml @@ -6,22 +6,22 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - clBLAS is the code for the OpenCL BLAS portion of clMath. The - complete set of BLAS level 1, 2 and 3 routines is implemented. See - Netlib BLAS for the list of supported routines. In addition to GPU - devices, the library also supports running on CPU devices to - facilitate debugging and multicore programming. - </longdescription> +clBLAS is the code for the OpenCL BLAS portion of clMath. The +complete set of BLAS level 1, 2 and 3 routines is implemented. See +Netlib BLAS for the list of supported routines. In addition to GPU +devices, the library also supports running on CPU devices to +facilitate debugging and multicore programming. +</longdescription> <use> <flag name="client"> - Build a command line clBLAS client program. - </flag> +Build a command line clBLAS client program. +</flag> <flag name="ktest"> - A command line tool for testing single clBLAS kernel. - </flag> +A command line tool for testing single clBLAS kernel. +</flag> <flag name="performance"> - Copy performance scripts that can measure and graph performance. - </flag> +Copy performance scripts that can measure and graph performance. +</flag> </use> <upstream> <remote-id type="github">clMathLibraries/clBLAS</remote-id> diff --git a/sci-libs/clfft/metadata.xml b/sci-libs/clfft/metadata.xml index 993a58197..e353d590c 100644 --- a/sci-libs/clfft/metadata.xml +++ b/sci-libs/clfft/metadata.xml @@ -10,20 +10,20 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - clFFT is a software library containing FFT functions written in - OpenCL. In addition to GPU devices, the libraries also support - running on CPU devices to facilitate debugging and multicore - programming. - clFFT is part of the clMath sofware library, which is the - successor of APPML. - </longdescription> +clFFT is a software library containing FFT functions written in +OpenCL. In addition to GPU devices, the libraries also support +running on CPU devices to facilitate debugging and multicore +programming. +clFFT is part of the clMath sofware library, which is the +successor of APPML. +</longdescription> <use> <flag name="callback_client"> - Build a command line clFFT client program that tests callback functionality. - </flag> +Build a command line clFFT client program that tests callback functionality. +</flag> <flag name="client"> - Build a command line clFFT client program. - </flag> +Build a command line clFFT client program. +</flag> </use> <upstream> <remote-id type="github">clMathLibraries/clFFT</remote-id> diff --git a/sci-libs/clrng/metadata.xml b/sci-libs/clrng/metadata.xml index 1fc6b6d43..9c2c8d6c7 100644 --- a/sci-libs/clrng/metadata.xml +++ b/sci-libs/clrng/metadata.xml @@ -7,8 +7,8 @@ </maintainer> <use> <flag name="client"> - Build a command line clRNG client program. - </flag> +Build a command line clRNG client program. +</flag> </use> <upstream> <remote-id type="github">clMathLibraries/clRNG</remote-id> diff --git a/sci-libs/dcmtk/metadata.xml b/sci-libs/dcmtk/metadata.xml index 42de27d5c..0d60702ee 100644 --- a/sci-libs/dcmtk/metadata.xml +++ b/sci-libs/dcmtk/metadata.xml @@ -6,17 +6,17 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - DCMTK is a collection of libraries and applications implementing large - parts the DICOM standard. It includes software for examining, - constructing and converting DICOM image files, handling offline media, - sending and receiving images over a network connection, as well as - demonstrative image storage and worklist servers. +DCMTK is a collection of libraries and applications implementing large +parts the DICOM standard. It includes software for examining, +constructing and converting DICOM image files, handling offline media, +sending and receiving images over a network connection, as well as +demonstrative image storage and worklist servers. </longdescription> <longdescription lang="fr"> - DCMTK est un ensemble de bibliothèques et d'application implémentant - une grande partie du standard DICOM. Cela comprend des logiciels de - visualisation et de conversion des fichier image, de manipulation de - médias locaux, de réception et d'envoi d'images à travers un réseau - ainsi qu'un serveur d'images et de worklist de demonstration. +DCMTK est un ensemble de bibliothèques et d'application implémentant +une grande partie du standard DICOM. Cela comprend des logiciels de +visualisation et de conversion des fichier image, de manipulation de +médias locaux, de réception et d'envoi d'images à travers un réseau +ainsi qu'un serveur d'images et de worklist de demonstration. </longdescription> </pkgmetadata> diff --git a/sci-libs/dealii/metadata.xml b/sci-libs/dealii/metadata.xml index 73c0c33a0..cc695c2b5 100644 --- a/sci-libs/dealii/metadata.xml +++ b/sci-libs/dealii/metadata.xml @@ -14,7 +14,7 @@ deal.II is a C++ program library targeted at the computational solution of partial differential equations using adaptive finite elements. It uses state-of-the-art programming techniques to offer you a modern interface to the complex data structures and algorithms required. - </longdescription> +</longdescription> <use> <flag name="adolc">Adds support for ADOL-C (<pkg>sci-libs/adolc</pkg>)</flag> <flag name="arpack">Adds support for ARPACK (<pkg>sci-libs/arpack</pkg>)</flag> diff --git a/sci-libs/fdlibm/metadata.xml b/sci-libs/fdlibm/metadata.xml index af6aeed88..5da90732e 100644 --- a/sci-libs/fdlibm/metadata.xml +++ b/sci-libs/fdlibm/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - FDLIBM (Freely Distributable LIBM) is a C math library - for machines that support IEEE 754 floating-point arithmetic. - In this release, only double precision is supported. +FDLIBM (Freely Distributable LIBM) is a C math library +for machines that support IEEE 754 floating-point arithmetic. +In this release, only double precision is supported. </longdescription> </pkgmetadata> diff --git a/sci-libs/framewave/metadata.xml b/sci-libs/framewave/metadata.xml index 51caca683..e22f8986c 100644 --- a/sci-libs/framewave/metadata.xml +++ b/sci-libs/framewave/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription>Derived from the AMD Performance Library, Framewave is a - free and open-source collection of popular image and signal processing - routines designed to accelerate application development, debugging, - multi-threading and optimization on x86-class processor platforms. - </longdescription> +free and open-source collection of popular image and signal processing +routines designed to accelerate application development, debugging, +multi-threading and optimization on x86-class processor platforms. +</longdescription> <upstream> <remote-id type="sourceforge">framewave</remote-id> </upstream> diff --git a/sci-libs/geom/metadata.xml b/sci-libs/geom/metadata.xml index d322fedbb..930d607dc 100644 --- a/sci-libs/geom/metadata.xml +++ b/sci-libs/geom/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Science Project</name> </maintainer> <use> - </use> +</use> <upstream> <remote-id type="sourceforge">salomegeometry</remote-id> </upstream> diff --git a/sci-libs/gotoblas2/metadata.xml b/sci-libs/gotoblas2/metadata.xml index acaa18f2f..ea48649a1 100644 --- a/sci-libs/gotoblas2/metadata.xml +++ b/sci-libs/gotoblas2/metadata.xml @@ -6,13 +6,13 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The GotoBLAS codes are one of the fastest implementations - of the Basic Linear Algebra Subroutines(BLAS). - To achieve performance it starts by observing that for current - generation architectures, much of the overhead comes from Translation - Look-aside Buffer (TLB) table misses. While the importance of caches - is also taken into consideration, it is the minimization of such TLB - misses that drives the approach. +The GotoBLAS codes are one of the fastest implementations +of the Basic Linear Algebra Subroutines(BLAS). +To achieve performance it starts by observing that for current +generation architectures, much of the overhead comes from Translation +Look-aside Buffer (TLB) table misses. While the importance of caches +is also taken into consideration, it is the minimization of such TLB +misses that drives the approach. </longdescription> <use> <flag name="int64">Build the 64 bits integer library</flag> diff --git a/sci-libs/gsl/metadata.xml b/sci-libs/gsl/metadata.xml index 0382d5709..06112a27a 100644 --- a/sci-libs/gsl/metadata.xml +++ b/sci-libs/gsl/metadata.xml @@ -6,20 +6,20 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The GNU Scientific Library (GSL) is a collection of routines for - numerical analysis. The routines are written from scratch by the GSL - team in C, and present a modern API for C programmers, while allowing - wrappers to be written for very high level languages. - - GSL includes data types and routines for complex numbers, vectors, - matrices, basic linear algebra subroutines (BLAS), eigensystems, - simulated annealing, minimization, root finding, pseudo-random - numbers, least-squares fitting, fast Fourier transforms (FFT), - differential equations, quadrature, Monte Carlo integration, special - functions, physical constants, and much more. +The GNU Scientific Library (GSL) is a collection of routines for +numerical analysis. The routines are written from scratch by the GSL +team in C, and present a modern API for C programmers, while allowing +wrappers to be written for very high level languages. + +GSL includes data types and routines for complex numbers, vectors, +matrices, basic linear algebra subroutines (BLAS), eigensystems, +simulated annealing, minimization, root finding, pseudo-random +numbers, least-squares fitting, fast Fourier transforms (FFT), +differential equations, quadrature, Monte Carlo integration, special +functions, physical constants, and much more. </longdescription> <use> <flag name="cblas-external">Link gsl with external cblas provided by - (<pkg>virtual/cblas</pkg>) instead of shipped internal version</flag> +(<pkg>virtual/cblas</pkg>) instead of shipped internal version</flag> </use> </pkgmetadata> diff --git a/sci-libs/io_lib/metadata.xml b/sci-libs/io_lib/metadata.xml index 228ee6ac8..f2d955844 100644 --- a/sci-libs/io_lib/metadata.xml +++ b/sci-libs/io_lib/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - io_lib is a library of file reading and writing code to provide a - general purpose trace file (and Experiment File) reading interface. The - programmer simply calls the (eg) read_reading to create a "Read" C structure - with the data loaded into memory. - </longdescription> +io_lib is a library of file reading and writing code to provide a +general purpose trace file (and Experiment File) reading interface. The +programmer simply calls the (eg) read_reading to create a "Read" C structure +with the data loaded into memory. +</longdescription> <upstream> <remote-id type="sourceforge">staden</remote-id> </upstream> diff --git a/sci-libs/ipp/metadata.xml b/sci-libs/ipp/metadata.xml index 8beb35c83..7bd17909e 100644 --- a/sci-libs/ipp/metadata.xml +++ b/sci-libs/ipp/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Intel(R) Integrated Performance Primitives (Intel(R) IPP) is a - library of multi-core-ready, optimized software functions for - multimedia data processing, and communications applications. +Intel(R) Integrated Performance Primitives (Intel(R) IPP) is a +library of multi-core-ready, optimized software functions for +multimedia data processing, and communications applications. </longdescription> </pkgmetadata> diff --git a/sci-libs/itk/metadata.xml b/sci-libs/itk/metadata.xml index 34d691187..8485fb7e1 100644 --- a/sci-libs/itk/metadata.xml +++ b/sci-libs/itk/metadata.xml @@ -9,10 +9,10 @@ <name>Gentoo Biology Project</name> </maintainer> <longdescription lang="en"> - Insight Segmentation and Registration Toolkit (ITK) is a library - that provides developers with an extensive suite of tools for image - analysis. - </longdescription> +Insight Segmentation and Registration Toolkit (ITK) is a library +that provides developers with an extensive suite of tools for image +analysis. +</longdescription> <use> <flag name="itkv3compat">Enable compatibility with ITK version 3</flag> <flag name="review">Enable compilation of methods under review</flag> diff --git a/sci-libs/lapack-reference/metadata.xml b/sci-libs/lapack-reference/metadata.xml index a4febbfd5..2fd11ecf7 100644 --- a/sci-libs/lapack-reference/metadata.xml +++ b/sci-libs/lapack-reference/metadata.xml @@ -6,20 +6,20 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Linear Algebra PACKage (LAPACK) is a comprehensive library that - does linear algebra operations including matrix inversions, least - squared solutions to linear sets of equations, eigenvector analysis, - singular value decomposition, etc. It is a very comprehensive and - reputable package that has found extensive use in the scientific community. - This package installs the reference FORTRAN 77 implementation from - Netlib for LAPACK and optionnally the one for the Basic Linear - Algebra Subprogram (BLAS). +The Linear Algebra PACKage (LAPACK) is a comprehensive library that +does linear algebra operations including matrix inversions, least +squared solutions to linear sets of equations, eigenvector analysis, +singular value decomposition, etc. It is a very comprehensive and +reputable package that has found extensive use in the scientific community. +This package installs the reference FORTRAN 77 implementation from +Netlib for LAPACK and optionnally the one for the Basic Linear +Algebra Subprogram (BLAS). </longdescription> <use> <flag name="deprecated">Build deprecated routines</flag> <flag name="int64">Build the 64 bits integer library</flag> <flag name="xblas"> - Build LAPACK with extra precision (needs <pkg>sci-libs/xblas</pkg>) - </flag> +Build LAPACK with extra precision (needs <pkg>sci-libs/xblas</pkg>) +</flag> </use> </pkgmetadata> diff --git a/sci-libs/lapacke-reference/metadata.xml b/sci-libs/lapacke-reference/metadata.xml index be7671ae7..26d2a3499 100644 --- a/sci-libs/lapacke-reference/metadata.xml +++ b/sci-libs/lapacke-reference/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - This implementation provides a native C interface to LAPACK routines - available at www.netlib.org/lapack to facilitate usage of LAPACK - functionality for C programmers. +This implementation provides a native C interface to LAPACK routines +available at www.netlib.org/lapack to facilitate usage of LAPACK +functionality for C programmers. </longdescription> <use> <flag name="deprecated">Build deprecated routines</flag> <flag name="tmg">Build LAPACKE with a Test Matrix Generator library</flag> <flag name="xblas">Build LAPACKE with extra precision (needs - <pkg>sci-libs/xblas</pkg>)</flag> +<pkg>sci-libs/xblas</pkg>)</flag> </use> </pkgmetadata> diff --git a/sci-libs/lapackpp/metadata.xml b/sci-libs/lapackpp/metadata.xml index cc5b2bc94..762285c1d 100644 --- a/sci-libs/lapackpp/metadata.xml +++ b/sci-libs/lapackpp/metadata.xml @@ -6,17 +6,17 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - LAPACK++ (Linear Algebra PACKage in C++) is a software library for - numerical linear algebra that solves systems of linear equations and - eigenvalue problems on high performance computer architectures. - Computational support is provided for supports various matrix classes - for vectors, non-symmetric matrices, SPD matrices, symmetric matrices, - banded, triangular, and tridiagonal matrices; however, it does not - include all of the capabilities of original f77 LAPACK. Emphasis is - given to routines for solving linear systems consisting of non-symmetric - matrices, symmetric positive definite systems, and solving linear - least-square systems. - </longdescription> +LAPACK++ (Linear Algebra PACKage in C++) is a software library for +numerical linear algebra that solves systems of linear equations and +eigenvalue problems on high performance computer architectures. +Computational support is provided for supports various matrix classes +for vectors, non-symmetric matrices, SPD matrices, symmetric matrices, +banded, triangular, and tridiagonal matrices; however, it does not +include all of the capabilities of original f77 LAPACK. Emphasis is +given to routines for solving linear systems consisting of non-symmetric +matrices, symmetric positive definite systems, and solving linear +least-square systems. +</longdescription> <upstream> <remote-id type="sourceforge">lapackpp</remote-id> </upstream> diff --git a/sci-libs/libgeodecomp/metadata.xml b/sci-libs/libgeodecomp/metadata.xml index d854cb35c..b1b9ce281 100644 --- a/sci-libs/libgeodecomp/metadata.xml +++ b/sci-libs/libgeodecomp/metadata.xml @@ -2,11 +2,11 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription> - LibGeoDecomp is an auto-parallelizing library to speed up stencil - code based computer simulations. It runs on virtually all current - architectures, be it multi-cores, GPUs, or large scale MPI - clusters. - </longdescription> +LibGeoDecomp is an auto-parallelizing library to speed up stencil +code based computer simulations. It runs on virtually all current +architectures, be it multi-cores, GPUs, or large scale MPI +clusters. +</longdescription> <maintainer type="person"> <email>gentryx@gmx.de</email> </maintainer> @@ -16,26 +16,26 @@ </maintainer> <use> <flag name="cuda"> - Enables plugins for NVIDIA GPUs (e.g. CUDASimulator and CUDAStepper) - </flag> +Enables plugins for NVIDIA GPUs (e.g. CUDASimulator and CUDAStepper) +</flag> <flag name="hpx"> - Activates the HPX backend as an alternative to the usual MPI backends. - </flag> +Activates the HPX backend as an alternative to the usual MPI backends. +</flag> <flag name="opencl"> - Builds those plugins which can offload to OpenCL devices. - </flag> +Builds those plugins which can offload to OpenCL devices. +</flag> <flag name="opencv"> - Some input components can read from cameras etc. via OpenCV - </flag> +Some input components can read from cameras etc. via OpenCV +</flag> <flag name="qt4"> - Adds the QTWidgetWriter, which allows in situ visualization of a - running simulation. - </flag> +Adds the QTWidgetWriter, which allows in situ visualization of a +running simulation. +</flag> <flag name="scotch"> - Optinally use Scotch for domain decomposition. - </flag> +Optinally use Scotch for domain decomposition. +</flag> <flag name="visit"> - Add in situ visualization for big simulations via VisIt. - </flag> +Add in situ visualization for big simulations via VisIt. +</flag> </use> </pkgmetadata> diff --git a/sci-libs/libmatheval/metadata.xml b/sci-libs/libmatheval/metadata.xml index 78f3bb0e2..f1914b25b 100644 --- a/sci-libs/libmatheval/metadata.xml +++ b/sci-libs/libmatheval/metadata.xml @@ -10,12 +10,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - GNU libmatheval is a library (callable from C and Fortran) to parse - and evaluate symbolic expressions input as text. It supports - expressions in any number of variables of arbitrary names, decimal - and symbolic constants, basic unary and binary operators, and - elementary mathematical functions. In addition to parsing and - evaluation, libmatheval can also compute symbolic derivatives and - output expressions to strings. +GNU libmatheval is a library (callable from C and Fortran) to parse +and evaluate symbolic expressions input as text. It supports +expressions in any number of variables of arbitrary names, decimal +and symbolic constants, basic unary and binary operators, and +elementary mathematical functions. In addition to parsing and +evaluation, libmatheval can also compute symbolic derivatives and +output expressions to strings. </longdescription> </pkgmetadata> diff --git a/sci-libs/libmaus/metadata.xml b/sci-libs/libmaus/metadata.xml index 9d59bbcf4..80f68639f 100644 --- a/sci-libs/libmaus/metadata.xml +++ b/sci-libs/libmaus/metadata.xml @@ -9,11 +9,11 @@ libmaus is a collection of data structures and algorithms. It contains I/O classes (single byte and UTF-8) - bitio classes (input, output and various forms of bit level manipulation) - text indexing classes (suffix and LCP array, fulltext and minute (FM), ...) - BAM sequence alignment files input/output (simple and collating) - and many lower level support classes. - </longdescription> +bitio classes (input, output and various forms of bit level manipulation) +text indexing classes (suffix and LCP array, fulltext and minute (FM), ...) +BAM sequence alignment files input/output (simple and collating) +and many lower level support classes. +</longdescription> <upstream> <remote-id type="github">gt1/libmaus</remote-id> </upstream> diff --git a/sci-libs/libmaus2/metadata.xml b/sci-libs/libmaus2/metadata.xml index 9d59bbcf4..80f68639f 100644 --- a/sci-libs/libmaus2/metadata.xml +++ b/sci-libs/libmaus2/metadata.xml @@ -9,11 +9,11 @@ libmaus is a collection of data structures and algorithms. It contains I/O classes (single byte and UTF-8) - bitio classes (input, output and various forms of bit level manipulation) - text indexing classes (suffix and LCP array, fulltext and minute (FM), ...) - BAM sequence alignment files input/output (simple and collating) - and many lower level support classes. - </longdescription> +bitio classes (input, output and various forms of bit level manipulation) +text indexing classes (suffix and LCP array, fulltext and minute (FM), ...) +BAM sequence alignment files input/output (simple and collating) +and many lower level support classes. +</longdescription> <upstream> <remote-id type="github">gt1/libmaus</remote-id> </upstream> diff --git a/sci-libs/libxc/metadata.xml b/sci-libs/libxc/metadata.xml index 47108ab63..064923854 100644 --- a/sci-libs/libxc/metadata.xml +++ b/sci-libs/libxc/metadata.xml @@ -10,21 +10,21 @@ <name>Honza Macháček</name> </maintainer> <longdescription lang="en"> - Libxc is a library of exchange-correlation functionals for density-functional theory. - The aim is to provide a portable, well tested and reliable set of exchange and correlation - functionals that can be used by all the ETSF codes and also other codes. +Libxc is a library of exchange-correlation functionals for density-functional theory. +The aim is to provide a portable, well tested and reliable set of exchange and correlation +functionals that can be used by all the ETSF codes and also other codes. - In Libxc you can find different types of functionals: LDA, GGA, hybrids, and mGGA (experimental). - These functionals depend on local information, in the sense that the value of the potential - at a given point depends only on the values of the density -- and the gradient of the density - and the kinetic energy density, for the GGA and mGGA cases. +In Libxc you can find different types of functionals: LDA, GGA, hybrids, and mGGA (experimental). +These functionals depend on local information, in the sense that the value of the potential +at a given point depends only on the values of the density -- and the gradient of the density +and the kinetic energy density, for the GGA and mGGA cases. - It can calculate the functional itself and its derivative; for some functionals, - higher-order derivatives are available. +It can calculate the functional itself and its derivative; for some functionals, +higher-order derivatives are available. - Libxc is written in C and has Fortran bindings. It is released under the LGPL license (v. 3.0). - Contributions are welcome. - </longdescription> +Libxc is written in C and has Fortran bindings. It is released under the LGPL license (v. 3.0). +Contributions are welcome. +</longdescription> <upstream> <doc>http://octopus-code.org/wiki/Libxc:manual</doc> </upstream> diff --git a/sci-libs/lwpr/metadata.xml b/sci-libs/lwpr/metadata.xml index 4df4d2c06..3418948e5 100644 --- a/sci-libs/lwpr/metadata.xml +++ b/sci-libs/lwpr/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - Locally Weighted Projection Regression (LWPR) is a recent algorithm - that achieves nonlinear function approximation in high dimensional spaces - with redundant and irrelevant input dimensions. At its core, it uses - locally linear models, spanned by a small number of univariate - regressions in selected directions in input space. A locally - weighted variant of Partial Least Squares (PLS) is employed for - doing the dimensionality reduction. - </longdescription> +Locally Weighted Projection Regression (LWPR) is a recent algorithm +that achieves nonlinear function approximation in high dimensional spaces +with redundant and irrelevant input dimensions. At its core, it uses +locally linear models, spanned by a small number of univariate +regressions in selected directions in input space. A locally +weighted variant of Partial Least Squares (PLS) is employed for +doing the dimensionality reduction. +</longdescription> <use> <flag name="octave">Add <pkg>sci-mathematics/octave</pkg> support</flag> </use> diff --git a/sci-libs/mkl/metadata.xml b/sci-libs/mkl/metadata.xml index 9badfacb9..1555184d5 100644 --- a/sci-libs/mkl/metadata.xml +++ b/sci-libs/mkl/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Intel(R) Math Kernel Library is a mathematical library mostly - optimized for Intel processors (also works on AMDs). It contains BLAS - and LAPACK implementations, Fast Fourier Transforms, a vector math - library, and random number generators. It also has multiprocessor - capacities. The package is installed as binary and has a restrictive - license. Please see license terms and home page for proper use. +The Intel(R) Math Kernel Library is a mathematical library mostly +optimized for Intel processors (also works on AMDs). It contains BLAS +and LAPACK implementations, Fast Fourier Transforms, a vector math +library, and random number generators. It also has multiprocessor +capacities. The package is installed as binary and has a restrictive +license. Please see license terms and home page for proper use. </longdescription> <use> <flag name="int64">Build the 64 bits integer library</flag> diff --git a/sci-libs/mlpack/metadata.xml b/sci-libs/mlpack/metadata.xml index 840f51833..1ce896b0f 100644 --- a/sci-libs/mlpack/metadata.xml +++ b/sci-libs/mlpack/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - mlpack is a C++ machine learning library with emphasis on - scalability, speed, and ease-of-use. Its aim is to make machine - learning possible for novice users by means of a simple, consistent - API, while simultaneously exploiting C++ language features to - provide maximum performance and maximum flexibility for expert - users. +mlpack is a C++ machine learning library with emphasis on +scalability, speed, and ease-of-use. Its aim is to make machine +learning possible for novice users by means of a simple, consistent +API, while simultaneously exploiting C++ language features to +provide maximum performance and maximum flexibility for expert +users. </longdescription> </pkgmetadata> diff --git a/sci-libs/mpiblacs/metadata.xml b/sci-libs/mpiblacs/metadata.xml index 14216ad4a..e90a78797 100644 --- a/sci-libs/mpiblacs/metadata.xml +++ b/sci-libs/mpiblacs/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The BLACS (Basic Linear Algebra Communication Subprograms) - project is an ongoing investigation whose purpose is to create - a linear algebra oriented message passing interface - that may be implemented efficiently and uniformly across - a large range of distributed memory platforms. +The BLACS (Basic Linear Algebra Communication Subprograms) +project is an ongoing investigation whose purpose is to create +a linear algebra oriented message passing interface +that may be implemented efficiently and uniformly across +a large range of distributed memory platforms. </longdescription> </pkgmetadata> diff --git a/sci-libs/nexus/metadata.xml b/sci-libs/nexus/metadata.xml index f2e2cd6fb..ef8f9fd1a 100644 --- a/sci-libs/nexus/metadata.xml +++ b/sci-libs/nexus/metadata.xml @@ -11,9 +11,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription>Libraries and tools for the NeXus data format, developed - collaboratively by scientists from major scientific facilities to facilitate - analysis and visualisation of neutron, x-ray and muon data. - NeXus is based on HDF5.</longdescription> +collaboratively by scientists from major scientific facilities to facilitate +analysis and visualisation of neutron, x-ray and muon data. +NeXus is based on HDF5.</longdescription> <use> <flag name="xml">Allow using the verbose XML representation of NeXus data</flag> <flag name="hdf4">Support the old HDF4 representation</flag> diff --git a/sci-libs/nibabel/metadata.xml b/sci-libs/nibabel/metadata.xml index f2109b11e..59e566e2d 100644 --- a/sci-libs/nibabel/metadata.xml +++ b/sci-libs/nibabel/metadata.xml @@ -10,12 +10,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The package provides read and write access to some common medical and - neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, - NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and write Freesurfer - geometry, and read Freesurfer morphometry and annotation files. There is some - very limited support for DICOM. NiBabel is the successor of PyNIfTI. - </longdescription> +The package provides read and write access to some common medical and +neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, +NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and write Freesurfer +geometry, and read Freesurfer morphometry and annotation files. There is some +very limited support for DICOM. NiBabel is the successor of PyNIfTI. +</longdescription> <use> <flag name="dicom">Adds limited read support for the DICOM imaging format.</flag> </use> diff --git a/sci-libs/nipy-data/metadata.xml b/sci-libs/nipy-data/metadata.xml index 6ae9754dc..920dec48f 100644 --- a/sci-libs/nipy-data/metadata.xml +++ b/sci-libs/nipy-data/metadata.xml @@ -10,6 +10,6 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Nipy-data is a package containing data files needed for many nipy demo tutorials. +Nipy-data is a package containing data files needed for many nipy demo tutorials. </longdescription> </pkgmetadata> diff --git a/sci-libs/nipy-templates/metadata.xml b/sci-libs/nipy-templates/metadata.xml index 5299e273f..1b34497a7 100644 --- a/sci-libs/nipy-templates/metadata.xml +++ b/sci-libs/nipy-templates/metadata.xml @@ -10,6 +10,6 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Nipy-templates is a package containing template files needed by some nipy functions. +Nipy-templates is a package containing template files needed by some nipy functions. </longdescription> </pkgmetadata> diff --git a/sci-libs/nipy/metadata.xml b/sci-libs/nipy/metadata.xml index e46b0c9ed..275ece9ff 100644 --- a/sci-libs/nipy/metadata.xml +++ b/sci-libs/nipy/metadata.xml @@ -10,8 +10,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - NIPY is a python project for analysis of structural and functional neuroimaging data. - </longdescription> +NIPY is a python project for analysis of structural and functional neuroimaging data. +</longdescription> <upstream> <remote-id type="pypi">nipy</remote-id> </upstream> diff --git a/sci-libs/nipype/metadata.xml b/sci-libs/nipype/metadata.xml index 7b0bf8a4f..fddca4ca4 100644 --- a/sci-libs/nipype/metadata.xml +++ b/sci-libs/nipype/metadata.xml @@ -10,17 +10,17 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Nipype, an open-source, community-developed initiative under the - umbrella of NiPy, is a Python project that provides a uniform interface - to existing neuroimaging software and facilitates interaction between - these packages within a single workflow. Nipype provides an environment - that encourages interactive exploration of algorithms from different - packages (e.g., SPM, FSL, FreeSurfer, Camino, MRtrix, MNE, AFNI, Slicer), - eases the design of workflows within and between packages, and reduces - the learning curve necessary to use different packages. Nipype is - creating a collaborative platform for neuroimaging software development - in a high-level language and addressing limitations of existing pipeline systems. - </longdescription> +Nipype, an open-source, community-developed initiative under the +umbrella of NiPy, is a Python project that provides a uniform interface +to existing neuroimaging software and facilitates interaction between +these packages within a single workflow. Nipype provides an environment +that encourages interactive exploration of algorithms from different +packages (e.g., SPM, FSL, FreeSurfer, Camino, MRtrix, MNE, AFNI, Slicer), +eases the design of workflows within and between packages, and reduces +the learning curve necessary to use different packages. Nipype is +creating a collaborative platform for neuroimaging software development +in a high-level language and addressing limitations of existing pipeline systems. +</longdescription> <upstream> <remote-id type="github">nipy/nipype</remote-id> <remote-id type="sourceforge">nipy</remote-id> diff --git a/sci-libs/o2scl/metadata.xml b/sci-libs/o2scl/metadata.xml index 4c7cd686b..20d390281 100644 --- a/sci-libs/o2scl/metadata.xml +++ b/sci-libs/o2scl/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - O2scl is a C++ class library for object-oriented numerical - programming. It includes classes based on numerical routines from - GSL and CERNLIB and two sub-libraries: thermodynamics of ideal and - nearly-ideal particles with quantum statistics and e quations of - state for finite density relevant for neutron stars. - </longdescription> +O2scl is a C++ class library for object-oriented numerical +programming. It includes classes based on numerical routines from +GSL and CERNLIB and two sub-libraries: thermodynamics of ideal and +nearly-ideal particles with quantum statistics and e quations of +state for finite density relevant for neutron stars. +</longdescription> <upstream> <remote-id type="sourceforge">o2scl</remote-id> </upstream> diff --git a/sci-libs/openblas/metadata.xml b/sci-libs/openblas/metadata.xml index df5bfcc92..55f42abc3 100644 --- a/sci-libs/openblas/metadata.xml +++ b/sci-libs/openblas/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD - version. See <pkg>sci-libs/gotoblas2</pkg> for more on GotoBLAS2. +OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD +version. See <pkg>sci-libs/gotoblas2</pkg> for more on GotoBLAS2. </longdescription> <use> <flag name="int64">Build the 64 bits integer library</flag> diff --git a/sci-libs/optpp/metadata.xml b/sci-libs/optpp/metadata.xml index d7fee3da5..afc414a95 100644 --- a/sci-libs/optpp/metadata.xml +++ b/sci-libs/optpp/metadata.xml @@ -6,17 +6,17 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - OPT++ is a library of nonlinear optimization algorithms written in - C++. The motivation for this package is to build an environment for - the rapid prototyping and development of new optimization - algorithms. In particular, the focus is on robust and efficient - algorithms for problems in which the function and constraint - evaluations require the execution of an expensive computer - simulation. Currently, OPT++ includes the classic Newton methods, a - nonlinear interior-point method, parallel direct search, generating - set search, a trust region - parallel direct search hybrid, and a - wrapper to NPSOL. Between these methods, a wide range of problems - can be solved, e.g. with or without constraints, with or without - analytic gradients, simulation based, etc. +OPT++ is a library of nonlinear optimization algorithms written in +C++. The motivation for this package is to build an environment for +the rapid prototyping and development of new optimization +algorithms. In particular, the focus is on robust and efficient +algorithms for problems in which the function and constraint +evaluations require the execution of an expensive computer +simulation. Currently, OPT++ includes the classic Newton methods, a +nonlinear interior-point method, parallel direct search, generating +set search, a trust region - parallel direct search hybrid, and a +wrapper to NPSOL. Between these methods, a wide range of problems +can be solved, e.g. with or without constraints, with or without +analytic gradients, simulation based, etc. </longdescription> </pkgmetadata> diff --git a/sci-libs/parmetis/metadata.xml b/sci-libs/parmetis/metadata.xml index 275a99b1a..cf1b66e81 100644 --- a/sci-libs/parmetis/metadata.xml +++ b/sci-libs/parmetis/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - ParMETIS is an MPI-based parallel library that implements a variety - of algorithms for partitioning unstructured graphs and for computing - fill-reducing orderings of sparse matrices. ParMETIS extends the - functionality provided by METIS and includes routines that are - especially suited for parallel AMR computations and large scale - numerical simulations. +ParMETIS is an MPI-based parallel library that implements a variety +of algorithms for partitioning unstructured graphs and for computing +fill-reducing orderings of sparse matrices. ParMETIS extends the +functionality provided by METIS and includes routines that are +especially suited for parallel AMR computations and large scale +numerical simulations. </longdescription> <use> <flag name="int64">Build the 64 bits integer library (needed for > 2^31 vertices)</flag> diff --git a/sci-libs/pg2plplot/metadata.xml b/sci-libs/pg2plplot/metadata.xml index 21ca1a06f..13c7b672b 100644 --- a/sci-libs/pg2plplot/metadata.xml +++ b/sci-libs/pg2plplot/metadata.xml @@ -10,9 +10,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - PG2PLplot is code intended to help the transition from Fortran code - linked against PGPlot to linking it against PLplot. - </longdescription> +PG2PLplot is code intended to help the transition from Fortran code +linked against PGPlot to linking it against PLplot. +</longdescription> <upstream> <remote-id type="sourceforge">pg2plplot</remote-id> </upstream> diff --git a/sci-libs/plasma/metadata.xml b/sci-libs/plasma/metadata.xml index d3f811d7a..b21b3df93 100644 --- a/sci-libs/plasma/metadata.xml +++ b/sci-libs/plasma/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Parallel Linear Algebra for Scalable Multi-core Architectures - (PLASMA) project aims to address the critical and highly disruptive - situation that is facing the Linear Algebra and High Performance - Computing community due to the introduction of multi-core - architectures. +The Parallel Linear Algebra for Scalable Multi-core Architectures +(PLASMA) project aims to address the critical and highly disruptive +situation that is facing the Linear Algebra and High Performance +Computing community due to the introduction of multi-core +architectures. </longdescription> </pkgmetadata> diff --git a/sci-libs/pmx/metadata.xml b/sci-libs/pmx/metadata.xml index 0d6036925..81b693168 100644 --- a/sci-libs/pmx/metadata.xml +++ b/sci-libs/pmx/metadata.xml @@ -6,13 +6,13 @@ <name>Gentoo Chemistry Project</name> </maintainer> <longdescription> - pmx (formerly pymacs) has started as a small bunch of classes to read - structure files such as pdb or gro and trajectory data in gromacs xtc - format. Over the years it has been extended towards a versatile (bio-) - molecular structure manipulation package with some additional - functionalities, e.g. gromacs file parsers and scripts for setup and - analysis of free energy calculations. - </longdescription> +pmx (formerly pymacs) has started as a small bunch of classes to read +structure files such as pdb or gro and trajectory data in gromacs xtc +format. Over the years it has been extended towards a versatile (bio-) +molecular structure manipulation package with some additional +functionalities, e.g. gromacs file parsers and scripts for setup and +analysis of free energy calculations. +</longdescription> <upstream> <remote-id type="github">dseeliger/pmx</remote-id> </upstream> diff --git a/sci-libs/scalapack/metadata.xml b/sci-libs/scalapack/metadata.xml index 4a08991eb..9515f4005 100644 --- a/sci-libs/scalapack/metadata.xml +++ b/sci-libs/scalapack/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines - redesigned for distributed memory MIMD parallel computers. It is currently - written in a Single-Program-Multiple-Data style using explicit message - passing for interprocessor communication. It assumes matrices are laid out - in a two-dimensional block cyclic decomposition. +The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines +redesigned for distributed memory MIMD parallel computers. It is currently +written in a Single-Program-Multiple-Data style using explicit message +passing for interprocessor communication. It assumes matrices are laid out +in a two-dimensional block cyclic decomposition. </longdescription> </pkgmetadata> diff --git a/sci-libs/scikits_image/metadata.xml b/sci-libs/scikits_image/metadata.xml index b5a24daa6..5ec0e96ff 100644 --- a/sci-libs/scikits_image/metadata.xml +++ b/sci-libs/scikits_image/metadata.xml @@ -6,14 +6,14 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - This SciKit (toolkit for SciPy) includes useful image processing - algorithms for use with Python and NumPy. While SciPy’s ndimage - provides low-level manipulation, scikits.image centres around - algorithms and applications. - </longdescription> +This SciKit (toolkit for SciPy) includes useful image processing +algorithms for use with Python and NumPy. While SciPy’s ndimage +provides low-level manipulation, scikits.image centres around +algorithms and applications. +</longdescription> <use> <flag name="freeimage">Enable support for image i/o via - <pkg>media-libs/freeimage</pkg></flag> +<pkg>media-libs/freeimage</pkg></flag> <flag name="pyamg">Enable support for algebraic solvers via <pkg>dev-python/pyamg</pkg></flag> </use> </pkgmetadata> diff --git a/sci-libs/shtools/metadata.xml b/sci-libs/shtools/metadata.xml index fe09def6d..2fc842248 100644 --- a/sci-libs/shtools/metadata.xml +++ b/sci-libs/shtools/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - SHTOOLS is an archive of Fortran 95 and Python software that can - be used to perform spherical harmonic transforms and - reconstructions, rotations of data expressed in spherical - harmonics, and multitaper spectral analyses on the sphere. - </longdescription> +SHTOOLS is an archive of Fortran 95 and Python software that can +be used to perform spherical harmonic transforms and +reconstructions, rotations of data expressed in spherical +harmonics, and multitaper spectral analyses on the sphere. +</longdescription> <upstream> <remote-id type="github">SHTOOLS/SHTOOLS</remote-id> </upstream> diff --git a/sci-libs/spglib/metadata.xml b/sci-libs/spglib/metadata.xml index 1d0e56bb3..aa3560014 100644 --- a/sci-libs/spglib/metadata.xml +++ b/sci-libs/spglib/metadata.xml @@ -10,8 +10,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Spglib is a C library for finding and handling crystal symmetries. - </longdescription> +Spglib is a C library for finding and handling crystal symmetries. +</longdescription> <upstream> <remote-id type="sourceforge">downloads</remote-id> </upstream> diff --git a/sci-libs/superlu_dist/metadata.xml b/sci-libs/superlu_dist/metadata.xml index dd5a7bdc6..0bd32bba5 100644 --- a/sci-libs/superlu_dist/metadata.xml +++ b/sci-libs/superlu_dist/metadata.xml @@ -6,21 +6,21 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - SuperLU is a general purpose library for the direct solution of - large, sparse, nonsymmetric systems of linear equations on high - performance machines. The library is written in C and is callable - from either C or Fortran. The library routines will perform an LU - decomposition with partial pivoting and triangular system solves - through forward and back substitution. The LU factorization routines - can handle non-square matrices but the triangular solves are - performed only for square matrices. The matrix columns may be - preordered (before factorization) either through library or user - supplied routines. This preordering for sparsity is completely - separate from the factorization. Working precision iterative - refinement subroutines are provided for improved backward - stability. Routines are also provided to equilibrate the system, - estimate the condition number, calculate the relative backward - error, and estimate error bounds for the refined solutions. - This is the distributed version (MPI based). +SuperLU is a general purpose library for the direct solution of +large, sparse, nonsymmetric systems of linear equations on high +performance machines. The library is written in C and is callable +from either C or Fortran. The library routines will perform an LU +decomposition with partial pivoting and triangular system solves +through forward and back substitution. The LU factorization routines +can handle non-square matrices but the triangular solves are +performed only for square matrices. The matrix columns may be +preordered (before factorization) either through library or user +supplied routines. This preordering for sparsity is completely +separate from the factorization. Working precision iterative +refinement subroutines are provided for improved backward +stability. Routines are also provided to equilibrate the system, +estimate the condition number, calculate the relative backward +error, and estimate error bounds for the refined solutions. +This is the distributed version (MPI based). </longdescription> </pkgmetadata> diff --git a/sci-libs/tmglib/metadata.xml b/sci-libs/tmglib/metadata.xml index 835152b3b..cbd1ba7ba 100644 --- a/sci-libs/tmglib/metadata.xml +++ b/sci-libs/tmglib/metadata.xml @@ -6,7 +6,7 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - This is a library to generate matrices to test LAPACK - implementations. +This is a library to generate matrices to test LAPACK +implementations. </longdescription> </pkgmetadata> diff --git a/sci-libs/trilinos/metadata.xml b/sci-libs/trilinos/metadata.xml index b430895e2..30049396c 100644 --- a/sci-libs/trilinos/metadata.xml +++ b/sci-libs/trilinos/metadata.xml @@ -13,9 +13,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The Trilinos Project is an effort to develop algorithms and enabling - technologies within an object-oriented software framework for the solution - of large-scale, complex multi-physics engineering and scientific problems. +The Trilinos Project is an effort to develop algorithms and enabling +technologies within an object-oriented software framework for the solution +of large-scale, complex multi-physics engineering and scientific problems. </longdescription> <use> <flag name="adolc">Add support for adolc (<pkg>sci-libs/adolc</pkg>)</flag> @@ -32,8 +32,8 @@ <flag name="hypre">Add support for hypre (<pkg>sci-libs/hypre</pkg>)</flag> <flag name="matio">Add support for matio (<pkg>sci-libs/matio</pkg>)</flag> <flag name="metis"> - Add support for metis (<pkg>sci-libs/metis</pkg> or <pkg>sci-libs/parmetis</pkg>) - </flag> +Add support for metis (<pkg>sci-libs/metis</pkg> or <pkg>sci-libs/parmetis</pkg>) +</flag> <flag name="mkl">Add support for mkl (<pkg>sci-libs/mkl</pkg>)</flag> <flag name="mumps">Add support for mumps (<pkg>sci-libs/mumps</pkg>)</flag> <flag name="netcdf">Add support for netcdf (<pkg>sci-libs/netcdf</pkg>)</flag> diff --git a/sci-libs/vxl/metadata.xml b/sci-libs/vxl/metadata.xml index eace5427d..22feba67c 100644 --- a/sci-libs/vxl/metadata.xml +++ b/sci-libs/vxl/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - VXL (the Vision-something-Libraries) is a collection of C++ libraries designed - for computer vision research and implementation. It was created from TargetJr - and the IUE with the aim of making a light, fast and consistent system. VXL is - written in ANSI/ISO C++ and is designed to be portable over many platforms. - </longdescription> +VXL (the Vision-something-Libraries) is a collection of C++ libraries designed +for computer vision research and implementation. It was created from TargetJr +and the IUE with the aim of making a light, fast and consistent system. VXL is +written in ANSI/ISO C++ and is designed to be portable over many platforms. +</longdescription> <upstream> <remote-id type="sourceforge">vxl</remote-id> </upstream> diff --git a/sci-libs/wannier90/metadata.xml b/sci-libs/wannier90/metadata.xml index 28beafa4a..07476ed95 100644 --- a/sci-libs/wannier90/metadata.xml +++ b/sci-libs/wannier90/metadata.xml @@ -10,11 +10,11 @@ <name>Honza Macháček</name> </maintainer> <longdescription lang="en"> - Wannier90 is an electronic-structure software computing maximally-localized Wannier functions (MLWF). - It works on top of other electronic-structure software, such as Abinit, FLEUR, and PwSCF. - The project and associated repository on Launchpad only deal with patches over the official release, - as well as its packaging into the Debian and Ubuntu distributions. - </longdescription> +Wannier90 is an electronic-structure software computing maximally-localized Wannier functions (MLWF). +It works on top of other electronic-structure software, such as Abinit, FLEUR, and PwSCF. +The project and associated repository on Launchpad only deal with patches over the official release, +as well as its packaging into the Debian and Ubuntu distributions. +</longdescription> <upstream> <doc>http://www.wannier.org/</doc> <remote-id type="launchpad">wannier90</remote-id> diff --git a/sci-libs/xblas/metadata.xml b/sci-libs/xblas/metadata.xml index 68c2d3b8e..11b4b52f7 100644 --- a/sci-libs/xblas/metadata.xml +++ b/sci-libs/xblas/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The XBLAS library of routines is part of a reference implementation for - the Dense and Banded Basic Linear Algebra Subroutines, along with their - Extended and Mixed Precision versions, as documented in Chapters 2 and 4 - of the new BLAS Standard. +The XBLAS library of routines is part of a reference implementation for +the Dense and Banded Basic Linear Algebra Subroutines, along with their +Extended and Mixed Precision versions, as documented in Chapters 2 and 4 +of the new BLAS Standard. </longdescription> <use> <flag name="int64">Build the 64 bits integer library</flag> diff --git a/sci-libs/xraylib/metadata.xml b/sci-libs/xraylib/metadata.xml index c3dc48c2f..e924a8916 100644 --- a/sci-libs/xraylib/metadata.xml +++ b/sci-libs/xraylib/metadata.xml @@ -9,35 +9,35 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Quantitative estimate of elemental composition by spectroscopic and imaging - techniques using X-ray fluorescence requires the availability of accurate data - of X-ray interaction with matter. Although a wide number of computer codes - and data sets are reported in literature, none of them is presented in the - form of freely available library functions which can be easily included in - software applications for X-ray fluorescence. This work presents a compilation - of data sets from different published works and an xraylib interface in the - form of callable functions. Although the target applications are on X-ray - fluorescence, cross sections of interactions like photoionization, coherent - scattering and Compton scattering, as well as form factors and anomalous - scattering functions, are also available. +Quantitative estimate of elemental composition by spectroscopic and imaging +techniques using X-ray fluorescence requires the availability of accurate data +of X-ray interaction with matter. Although a wide number of computer codes +and data sets are reported in literature, none of them is presented in the +form of freely available library functions which can be easily included in +software applications for X-ray fluorescence. This work presents a compilation +of data sets from different published works and an xraylib interface in the +form of callable functions. Although the target applications are on X-ray +fluorescence, cross sections of interactions like photoionization, coherent +scattering and Compton scattering, as well as form factors and anomalous +scattering functions, are also available. - xraylib provides access to some of the most respected databases of physical - data in the field of x-rays. The core of xraylib is a library, written in ANSI - C, containing over 40 functions to be used to retrieve data from these - databases. This C library can be directly linked with any program written in - C, C++ or Objective-C. Furthermore, the xraylib package contains bindings to - several popular programming languages: Fortran 2003, Perl, Python, Java, IDL, - Lua and .NET, as well as a command-line utility which can be used as a - pocket-calculator. Although not officially supported, xraylib has been - reported to be useable from within Matlab and LabView. - - Reference: T. Schoonjans, A. Brunetti, B. Golosio, M. Sanchez del Rio, - V. A. Solé, C. Ferrero and L. Vincze, "The xraylib library for X-ray--matter - interactions. Recent developments", Spectrochimica Acta B 66 (2011) 776-784 - ( doi: http://dx.doi.org/10.1016/j.sab.2011.09.011 ) - </longdescription> +xraylib provides access to some of the most respected databases of physical +data in the field of x-rays. The core of xraylib is a library, written in ANSI +C, containing over 40 functions to be used to retrieve data from these +databases. This C library can be directly linked with any program written in +C, C++ or Objective-C. Furthermore, the xraylib package contains bindings to +several popular programming languages: Fortran 2003, Perl, Python, Java, IDL, +Lua and .NET, as well as a command-line utility which can be used as a +pocket-calculator. Although not officially supported, xraylib has been +reported to be useable from within Matlab and LabView. + +Reference: T. Schoonjans, A. Brunetti, B. Golosio, M. Sanchez del Rio, +V. A. Solé, C. Ferrero and L. Vincze, "The xraylib library for X-ray--matter +interactions. Recent developments", Spectrochimica Acta B 66 (2011) 776-784 +( doi: http://dx.doi.org/10.1016/j.sab.2011.09.011 ) +</longdescription> <use> - </use> +</use> <upstream> <remote-id type="github">tschoonj/xraylib</remote-id> </upstream> diff --git a/sci-libs/zarja/metadata.xml b/sci-libs/zarja/metadata.xml index ef8915f36..cfa88767a 100644 --- a/sci-libs/zarja/metadata.xml +++ b/sci-libs/zarja/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Zarja is open-source library that allows to make multi-agent - simulations on graphs. Its functionality was proved in Classical or - Quantum mechanical models. - </longdescription> +Zarja is open-source library that allows to make multi-agent +simulations on graphs. Its functionality was proved in Classical or +Quantum mechanical models. +</longdescription> <upstream> <remote-id type="sourceforge">zarja</remote-id> </upstream> diff --git a/sci-mathematics/Macaulay2/metadata.xml b/sci-mathematics/Macaulay2/metadata.xml index a19ac4ea6..05e3f791a 100644 --- a/sci-mathematics/Macaulay2/metadata.xml +++ b/sci-mathematics/Macaulay2/metadata.xml @@ -13,7 +13,7 @@ <flag name="optimization">Disable to build with -O0 for debugging.</flag> </use> <longdescription lang="en"> - Macaulay2 is a research tool for algraic geometry and commutative - algebra. +Macaulay2 is a research tool for algraic geometry and commutative +algebra. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/Oid/metadata.xml b/sci-mathematics/Oid/metadata.xml index 1d93dd236..a457ecd20 100644 --- a/sci-mathematics/Oid/metadata.xml +++ b/sci-mathematics/Oid/metadata.xml @@ -10,6 +10,6 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - Oid is a tool to experiment with matroids +Oid is a tool to experiment with matroids </longdescription> </pkgmetadata> diff --git a/sci-mathematics/acl2/metadata.xml b/sci-mathematics/acl2/metadata.xml index e2db827ec..b77817aa3 100644 --- a/sci-mathematics/acl2/metadata.xml +++ b/sci-mathematics/acl2/metadata.xml @@ -15,11 +15,11 @@ ACL2 is both a programming language in which you can model computer systems and a tool to help you prove properties of those models. ACL2 is part of the Boyer-Moore family of provers, for which its authors have received the 2005 ACM Software System Award. - </longdescription> +</longdescription> <use> <flag name="books"> - build community books, the canonical collection of open-source libraries - </flag> +build community books, the canonical collection of open-source libraries +</flag> </use> <upstream> <remote-id type="github">acl2-devel/acl2-devel</remote-id> diff --git a/sci-mathematics/alt-ergo/metadata.xml b/sci-mathematics/alt-ergo/metadata.xml index b844eacad..a28eb2ec7 100644 --- a/sci-mathematics/alt-ergo/metadata.xml +++ b/sci-mathematics/alt-ergo/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - Alt-Ergo is an open source automatic theorem prover dedicated to program verification. - It is an SMT solver based on CC(X): a congruence closure algorithm parameterized by an - equational theory X. Alt-Ergo is based on a home-made SAT-solver and implements an - instantiation mechanism for quantified formulas. Its architecture is summarized by the - the following picture. +Alt-Ergo is an open source automatic theorem prover dedicated to program verification. +It is an SMT solver based on CC(X): a congruence closure algorithm parameterized by an +equational theory X. Alt-Ergo is based on a home-made SAT-solver and implements an +instantiation mechanism for quantified formulas. Its architecture is summarized by the +the following picture. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/apron/metadata.xml b/sci-mathematics/apron/metadata.xml index d77f1f1fc..d31da6be0 100644 --- a/sci-mathematics/apron/metadata.xml +++ b/sci-mathematics/apron/metadata.xml @@ -6,13 +6,13 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - The APRON library is dedicated to the static analysis of the numerical - variables of a program by Abstract Interpretation. The aim of such an - analysis is to infer invariants about these variables. The APRON library - is intended to be a common interface to various underlying - libraries/abstract domains and to provide additional services that can - be implemented independently from the underlying library/abstract - domain, as shown by the poster on the right (presented at the SAS 2007 - conference. +The APRON library is dedicated to the static analysis of the numerical +variables of a program by Abstract Interpretation. The aim of such an +analysis is to infer invariants about these variables. The APRON library +is intended to be a common interface to various underlying +libraries/abstract domains and to provide additional services that can +be implemented independently from the underlying library/abstract +domain, as shown by the poster on the right (presented at the SAS 2007 +conference. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/burrtools/metadata.xml b/sci-mathematics/burrtools/metadata.xml index aeaa6502a..a7fbeb904 100644 --- a/sci-mathematics/burrtools/metadata.xml +++ b/sci-mathematics/burrtools/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - This (set of) program(s) will help you solve a certain kind of puzzle. - Namely puzzles that are made out of square or dice shaped units, spheres or - prisms with an equilateral triangle as base and where the pieces are also - aligned along those grids in the solutions. - </longdescription> +This (set of) program(s) will help you solve a certain kind of puzzle. +Namely puzzles that are made out of square or dice shaped units, spheres or +prisms with an equilateral triangle as base and where the pieces are also +aligned along those grids in the solutions. +</longdescription> <upstream> <remote-id type="sourceforge">burrtools</remote-id> </upstream> diff --git a/sci-mathematics/cipi/metadata.xml b/sci-mathematics/cipi/metadata.xml index ac95ce972..d570fe380 100644 --- a/sci-mathematics/cipi/metadata.xml +++ b/sci-mathematics/cipi/metadata.xml @@ -12,7 +12,7 @@ <longdescription lang="en"> cipi is a threaded implementation of iterative proportional fitting. It is used to compute information projections iteratively. - </longdescription> +</longdescription> <upstream> <remote-id type="github">tom111/cipi</remote-id> </upstream> diff --git a/sci-mathematics/dolfin/metadata.xml b/sci-mathematics/dolfin/metadata.xml index f35a5e9a9..26a0480f0 100644 --- a/sci-mathematics/dolfin/metadata.xml +++ b/sci-mathematics/dolfin/metadata.xml @@ -7,7 +7,7 @@ </maintainer> <longdescription lang="en"> DOLFIN is the C++/Python interface of FEniCS, providing a consistent PSE (Problem Solving Environment) for ordinary and partial differential equations. - </longdescription> +</longdescription> <use> <flag name="cgal">Adds support for geometric algorithms with <pkg>sci-mathematics/cgal</pkg></flag> <flag name="cholmod">Adds support for sparse Cholesky factorization with <pkg>sci-libs/cholmod</pkg></flag> diff --git a/sci-mathematics/dsfmt/metadata.xml b/sci-mathematics/dsfmt/metadata.xml index f1ed0ae83..d2482ce5f 100644 --- a/sci-mathematics/dsfmt/metadata.xml +++ b/sci-mathematics/dsfmt/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - The purpose of Double precision SIMD-oriented Fast Mersenne Twister (dSFMT) - is to speed up the generation by avoiding the expensive conversion - of integer to double (floating point). dSFMT directly generates - double precision floating point pseudorandom numbers which have the - IEEE Standard for Binary Floating-Point Arithmetic (ANSI/IEEE Std - 754-1985) format. dSFMT is only available on the CPUs which use IEEE - 754 format double precision floating point numbers. +The purpose of Double precision SIMD-oriented Fast Mersenne Twister (dSFMT) +is to speed up the generation by avoiding the expensive conversion +of integer to double (floating point). dSFMT directly generates +double precision floating point pseudorandom numbers which have the +IEEE Standard for Binary Floating-Point Arithmetic (ANSI/IEEE Std +754-1985) format. dSFMT is only available on the CPUs which use IEEE +754 format double precision floating point numbers. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/flocq/metadata.xml b/sci-mathematics/flocq/metadata.xml index 741e7a96c..de5ba354b 100644 --- a/sci-mathematics/flocq/metadata.xml +++ b/sci-mathematics/flocq/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - Flocq (Floats for Coq) is a floating-point formalization for the Coq - system. It provides a comprehensive library of theorems on a multi-radix - multi-precision arithmetic. It also supports efficient numerical - computations inside Coq. +Flocq (Floats for Coq) is a floating-point formalization for the Coq +system. It provides a comprehensive library of theorems on a multi-radix +multi-precision arithmetic. It also supports efficient numerical +computations inside Coq. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/frama-c/metadata.xml b/sci-mathematics/frama-c/metadata.xml index 7f2539fc0..6e6c849a1 100644 --- a/sci-mathematics/frama-c/metadata.xml +++ b/sci-mathematics/frama-c/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - Frama-C is a suite of tools dedicated to the analysis of the source code - of software written in C. It gathers several static analysis techniques - in a single collaborative framework. The collaborative approach of - Frama-C allows static analyzers to build upon the results already - computed by other analyzers in the framework. Thanks to this approach, - Frama-C provides sophisticated tools, such as a slicer and dependency - analysis. +Frama-C is a suite of tools dedicated to the analysis of the source code +of software written in C. It gathers several static analysis techniques +in a single collaborative framework. The collaborative approach of +Frama-C allows static analyzers to build upon the results already +computed by other analyzers in the framework. Thanks to this approach, +Frama-C provides sophisticated tools, such as a slicer and dependency +analysis. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/freefem++/metadata.xml b/sci-mathematics/freefem++/metadata.xml index 7cbac49f7..a605d78d7 100644 --- a/sci-mathematics/freefem++/metadata.xml +++ b/sci-mathematics/freefem++/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - FreeFem++ is an implementation of a language dedicated to the finite - element method. It enables you to solve Partial Differential Equations - (PDE) easily. +FreeFem++ is an implementation of a language dedicated to the finite +element method. It enables you to solve Partial Differential Equations +(PDE) easily. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/gambit/metadata.xml b/sci-mathematics/gambit/metadata.xml index e0ec892a5..c19ddfa46 100644 --- a/sci-mathematics/gambit/metadata.xml +++ b/sci-mathematics/gambit/metadata.xml @@ -11,8 +11,8 @@ </maintainer> <use> <flag name="X"> - Enable gui support using wxWidgets. - </flag> +Enable gui support using wxWidgets. +</flag> </use> <upstream> <remote-id type="sourceforge">gambit</remote-id> diff --git a/sci-mathematics/gap/metadata.xml b/sci-mathematics/gap/metadata.xml index 7fa3c9717..2d5c1a14d 100644 --- a/sci-mathematics/gap/metadata.xml +++ b/sci-mathematics/gap/metadata.xml @@ -10,14 +10,14 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - Groups, Algorithms, Programming is a system for computational - discrete algebra, with particular emphasis on Computational Group - Theory. GAP provides a programming language, a library of thousands - of functions implementing algebraic algorithms written in the GAP - language as well as large data libraries of algebraic objects. GAP - is used in research and teaching for studying groups and their - representations, rings, vector spaces, algebras, combinatorial - structures, and more. +Groups, Algorithms, Programming is a system for computational +discrete algebra, with particular emphasis on Computational Group +Theory. GAP provides a programming language, a library of thousands +of functions implementing algebraic algorithms written in the GAP +language as well as large data libraries of algebraic objects. GAP +is used in research and teaching for studying groups and their +representations, rings, vector spaces, algebras, combinatorial +structures, and more. </longdescription> <use> <flag name="xtom">Automatically generated description for xtom</flag> diff --git a/sci-mathematics/gappa/metadata.xml b/sci-mathematics/gappa/metadata.xml index 872d5ad20..448d16798 100644 --- a/sci-mathematics/gappa/metadata.xml +++ b/sci-mathematics/gappa/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - Gappa is a tool intended to help verifying and formally proving - properties on numerical programs dealing with floating-point or - fixed-point arithmetic. It has been used to write robust floating-point - filters for CGAL and it is used to certify elementary functions in - CRlibm. +Gappa is a tool intended to help verifying and formally proving +properties on numerical programs dealing with floating-point or +fixed-point arithmetic. It has been used to write robust floating-point +filters for CGAL and it is used to certify elementary functions in +CRlibm. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/gappalib-coq/metadata.xml b/sci-mathematics/gappalib-coq/metadata.xml index ba444cb94..182ed0520 100644 --- a/sci-mathematics/gappalib-coq/metadata.xml +++ b/sci-mathematics/gappalib-coq/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - While Gappa is intended to be used directly, it can also act as a - backend prover for the Why software verification plateform or as an - automatic tactic for the Coq proof assistant. +While Gappa is intended to be used directly, it can also act as a +backend prover for the Why software verification plateform or as an +automatic tactic for the Coq proof assistant. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/giac/metadata.xml b/sci-mathematics/giac/metadata.xml index aa9b2646b..60502e1d7 100644 --- a/sci-mathematics/giac/metadata.xml +++ b/sci-mathematics/giac/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - Giac is a free computer algebra system that can be used to perform - computer algebra, function graphs, interactive geometry (2-d and 3-d), - spreadsheet and statistics, programmation. It may be used as a replacement - for high end graphic calculators for example on netbooks (for about - the same price as a calculator but with much more performances). +Giac is a free computer algebra system that can be used to perform +computer algebra, function graphs, interactive geometry (2-d and 3-d), +spreadsheet and statistics, programmation. It may be used as a replacement +for high end graphic calculators for example on netbooks (for about +the same price as a calculator but with much more performances). </longdescription> </pkgmetadata> diff --git a/sci-mathematics/kayali/metadata.xml b/sci-mathematics/kayali/metadata.xml index def9a9d8c..df0c0137a 100644 --- a/sci-mathematics/kayali/metadata.xml +++ b/sci-mathematics/kayali/metadata.xml @@ -10,7 +10,7 @@ kayali is a Qt based Computer Algebra System (CAS) that can also be used as an advanced replacement for KDE KCalc. It is essentially a front end GUI forMaxima (and is easily extended to other CAS back-ends) and Gnuplot. - </longdescription> +</longdescription> <upstream> <remote-id type="sourceforge">kayali</remote-id> </upstream> diff --git a/sci-mathematics/mathics/metadata.xml b/sci-mathematics/mathics/metadata.xml index b578df1bf..b7bcd8c15 100644 --- a/sci-mathematics/mathics/metadata.xml +++ b/sci-mathematics/mathics/metadata.xml @@ -9,15 +9,15 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - Mathics—to be pronounced like “Mathematics” without the “emat”—is a general-purpose computer algebra system (CAS). - It is meant to be a free, light-weight alternative to Mathematica®. It is free both as in “free beer” and as in “freedom”. - There are various online mirrors running Mathics but it is also possible to run Mathics locally. A list of mirrors - can be found at the Mathics homepage, http://mathics.github.io. +Mathics—to be pronounced like “Mathematics” without the “emat”—is a general-purpose computer algebra system (CAS). +It is meant to be a free, light-weight alternative to Mathematica®. It is free both as in “free beer” and as in “freedom”. +There are various online mirrors running Mathics but it is also possible to run Mathics locally. A list of mirrors +can be found at the Mathics homepage, http://mathics.github.io. - The programming language of Mathics is meant to resemble Wolfram's famous Mathematica® as much as possible. - However, Mathics is in no way affiliated or supported by Wolfram. Mathics will probably never have the power to - compete with Mathematica® in industrial applications; yet, it might be an interesting alternative for educational purposes. - </longdescription> +The programming language of Mathics is meant to resemble Wolfram's famous Mathematica® as much as possible. +However, Mathics is in no way affiliated or supported by Wolfram. Mathics will probably never have the power to +compete with Mathematica® in industrial applications; yet, it might be an interesting alternative for educational purposes. +</longdescription> <upstream> <remote-id type="github">mathics/Mathics</remote-id> </upstream> diff --git a/sci-mathematics/mdp/metadata.xml b/sci-mathematics/mdp/metadata.xml index 63bb3d1f1..4a8c55d36 100644 --- a/sci-mathematics/mdp/metadata.xml +++ b/sci-mathematics/mdp/metadata.xml @@ -10,13 +10,13 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - Modular toolkit for Data Processing (MDP) is a Python data processing - framework. Implemented algorithms include: Principal Component Analysis - (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), - Independent Slow Feature Analysis (ISFA), Growing Neural Gas (GNG), Factor - Analysis, Fisher Discriminant Analysis (FDA), Gaussian Classifiers, and - Restricted Boltzmann Machines. - </longdescription> +Modular toolkit for Data Processing (MDP) is a Python data processing +framework. Implemented algorithms include: Principal Component Analysis +(PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), +Independent Slow Feature Analysis (ISFA), Growing Neural Gas (GNG), Factor +Analysis, Fisher Discriminant Analysis (FDA), Gaussian Classifiers, and +Restricted Boltzmann Machines. +</longdescription> <upstream> <remote-id type="sourceforge">mdp-toolkit</remote-id> </upstream> diff --git a/sci-mathematics/open-axiom/metadata.xml b/sci-mathematics/open-axiom/metadata.xml index e1c513481..c9b1f5cd4 100644 --- a/sci-mathematics/open-axiom/metadata.xml +++ b/sci-mathematics/open-axiom/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - OpenAxiom is an open source platform for symbolic, algebraic, and - numerical computations. It offers an interactive environment, an expressive - programming language, a compiler, a large set of mathematical libraries of - interest to researchers and practitioners of computational sciences. - </longdescription> +OpenAxiom is an open source platform for symbolic, algebraic, and +numerical computations. It offers an interactive environment, an expressive +programming language, a compiler, a large set of mathematical libraries of +interest to researchers and practitioners of computational sciences. +</longdescription> <upstream> <remote-id type="sourceforge">open-axiom</remote-id> </upstream> diff --git a/sci-mathematics/pff/metadata.xml b/sci-mathematics/pff/metadata.xml index 15984c1cd..0c97b245d 100644 --- a/sci-mathematics/pff/metadata.xml +++ b/sci-mathematics/pff/metadata.xml @@ -6,9 +6,9 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - PFF (Preuves Formelles sur les Flottants = Formal Proofs about Floats) - is a repository of a Coq library about floating-point arithmetic. It - contains both definitions and proofs of basic facts, old and new - properties and algorithms. +PFF (Preuves Formelles sur les Flottants = Formal Proofs about Floats) +is a repository of a Coq library about floating-point arithmetic. It +contains both definitions and proofs of basic facts, old and new +properties and algorithms. </longdescription> </pkgmetadata> diff --git a/sci-mathematics/scilab/metadata.xml b/sci-mathematics/scilab/metadata.xml index da1c3fd2d..ef72c6a0f 100644 --- a/sci-mathematics/scilab/metadata.xml +++ b/sci-mathematics/scilab/metadata.xml @@ -6,19 +6,19 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription lang="en"> - Scilab is a matrix-based scientific software package. Scilab contains - hundreds of built-in mathematical functions, rich data structures - (including polynomials, rationals,linear systems, lists, etc...) and - comes with a number of specific toolboxes for control, signal - processing, ... +Scilab is a matrix-based scientific software package. Scilab contains +hundreds of built-in mathematical functions, rich data structures +(including polynomials, rationals,linear systems, lists, etc...) and +comes with a number of specific toolboxes for control, signal +processing, ... </longdescription> <use> <flag name="gui">Build the Java base graphical interface</flag> <flag name="umfpack">Adds support for sparse solving - with <pkg>sci-libs/umfpack</pkg></flag> +with <pkg>sci-libs/umfpack</pkg></flag> <flag name="matio">Enable support for MATLAB file through <pkg>sci-libs/matio</pkg></flag> <flag name="xcos">Enable building hybrid dynamic systems modeler and - simulator Xcos</flag> +simulator Xcos</flag> <flag name="emf">Add suport for exporting to emf files</flag> </use> </pkgmetadata> diff --git a/sci-mathematics/ufc/metadata.xml b/sci-mathematics/ufc/metadata.xml index 9a93b9cc9..062f16a24 100644 --- a/sci-mathematics/ufc/metadata.xml +++ b/sci-mathematics/ufc/metadata.xml @@ -7,7 +7,7 @@ </maintainer> <longdescription lang="en"> UFC (Unified Form-assembly Code) is a unified framework for finite element assembly. More precisely, it defines a fixed interface for communicating low level routines (functions) for evaluating and assembling finite element variational forms. The UFC interface consists of a single header file ufc.h that specifies a C++ interface that must be implemented by code that complies with the UFC specification. - </longdescription> +</longdescription> <upstream> <remote-id type="bitbucket">fenics-project/ufc-deprecated</remote-id> <remote-id type="launchpad">ufc</remote-id> diff --git a/sci-mathematics/why/metadata.xml b/sci-mathematics/why/metadata.xml index bc61eeae6..70e1eb45f 100644 --- a/sci-mathematics/why/metadata.xml +++ b/sci-mathematics/why/metadata.xml @@ -6,15 +6,15 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Why is a software verification platform. It contains a general-purpose - verification condition generator (VCG) which is used as a back-end - by other verification tools but it can also be used directly to verify - programs. It also provides Krakatoa, a tool or the verification of Java - programs and Caduceus, a tool for the verification of C programs. +Why is a software verification platform. It contains a general-purpose +verification condition generator (VCG) which is used as a back-end +by other verification tools but it can also be used directly to verify +programs. It also provides Krakatoa, a tool or the verification of Java +programs and Caduceus, a tool for the verification of C programs. </longdescription> <use> <flag name="apron">Use <pkg>sci-mathematics/apron</pkg> library for - abstract interpretation</flag> +abstract interpretation</flag> <flag name="coq">Add <pkg>sci-mathematics/coq</pkg> support</flag> <flag name="float">Add <pkg>sci-mathematics/flocq</pkg> support</flag> <flag name="gappa">Add <pkg>sci-mathematics/gappalib-coq</pkg> support</flag> diff --git a/sci-mathematics/why3/metadata.xml b/sci-mathematics/why3/metadata.xml index 47cb67ef8..5f92771c1 100644 --- a/sci-mathematics/why3/metadata.xml +++ b/sci-mathematics/why3/metadata.xml @@ -6,16 +6,16 @@ <name>Gentoo Mathematics Project</name> </maintainer> <longdescription> - Why3 is a platform for deductive program verification. It provides - a rich language for specification and programming, called WhyML, - and relies on external theorem provers, both automated and interactive, - to discharge verification conditions. Why3 comes with a standard - library of logical theories (integer and real arithmetic, Boolean - operations, sets and maps, etc.) and basic programming data structures - (arrays, queues, hash tables, etc.). A user can write WhyML programs - directly and get correct-by-construction OCaml programs through an - automated extraction mechanism. WhyML is also used as an intermediate - language for the verification of C, Java, or Ada programs. +Why3 is a platform for deductive program verification. It provides +a rich language for specification and programming, called WhyML, +and relies on external theorem provers, both automated and interactive, +to discharge verification conditions. Why3 comes with a standard +library of logical theories (integer and real arithmetic, Boolean +operations, sets and maps, etc.) and basic programming data structures +(arrays, queues, hash tables, etc.). A user can write WhyML programs +directly and get correct-by-construction OCaml programs through an +automated extraction mechanism. WhyML is also used as an intermediate +language for the verification of C, Java, or Ada programs. </longdescription> <use> <flag name="float">Add <pkg>sci-mathematics/flocq</pkg> support</flag> diff --git a/sci-mathematics/yorick/metadata.xml b/sci-mathematics/yorick/metadata.xml index b1239e2c8..aa9387970 100644 --- a/sci-mathematics/yorick/metadata.xml +++ b/sci-mathematics/yorick/metadata.xml @@ -13,7 +13,7 @@ Yorick is a language for scientific computing and rapid prototyping, similar to matlab. It can easily call C functions and libraries, has multidimensional arrays and built-in plot functions. - </longdescription> +</longdescription> <upstream> <remote-id type="sourceforge">yorick</remote-id> </upstream> diff --git a/sci-misc/elmer-gui/metadata.xml b/sci-misc/elmer-gui/metadata.xml index b704f5d8b..ea0c38830 100644 --- a/sci-misc/elmer-gui/metadata.xml +++ b/sci-misc/elmer-gui/metadata.xml @@ -9,7 +9,7 @@ <flag name="bundled_netgen"> Use bundled version of <pkg>sci-mathematics/netgen</pkg></flag> <flag name="matc"> Enables <pkg>sci-libs/matc</pkg> support</flag> <flag name="opencascade"> Enable <pkg>sci-libs/opencascade</pkg> - support</flag> +support</flag> <flag name="qwt"> Enables <pkg>x11-libs/qwt</pkg> support</flag> <flag name="vtk"> Enables <pkg>sci-libs/vtk</pkg> support</flag> </use> diff --git a/sci-misc/hfst/metadata.xml b/sci-misc/hfst/metadata.xml index 4be3eac8d..1bda309e1 100644 --- a/sci-misc/hfst/metadata.xml +++ b/sci-misc/hfst/metadata.xml @@ -2,28 +2,28 @@ <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription lang="en"> - Open Source API for FSTs, a set of command line tools, and clones of - traditional FST-based linguistic morphology tools. - </longdescription> +Open Source API for FSTs, a set of command line tools, and clones of +traditional FST-based linguistic morphology tools. +</longdescription> <use> <flag name="openfst"> - Add optional support for openfst backend library - (<pkg>sci-misc/openfst</pkg>) - </flag> +Add optional support for openfst backend library +(<pkg>sci-misc/openfst</pkg>) +</flag> <flag name="foma"> - Add optional support for foma backend library - (<pkg>sci-misc/foma</pkg>)</flag> +Add optional support for foma backend library +(<pkg>sci-misc/foma</pkg>)</flag> <flag name="sfst"> - Add optional support for sfst backend library - (<pkg>sci-misc/sfst</pkg>) - </flag> +Add optional support for sfst backend library +(<pkg>sci-misc/sfst</pkg>) +</flag> <flag name="glib"> - Parse UTF-8 and collate unicode using glib instead of - homebrewn methods - </flag> +Parse UTF-8 and collate unicode using glib instead of +homebrewn methods +</flag> <flag name="xml"> - Include parsers for grammars and formats that require XML support - </flag> +Include parsers for grammars and formats that require XML support +</flag> </use> <upstream> <remote-id type="sourceforge">hfst</remote-id> diff --git a/sci-misc/irstlm/metadata.xml b/sci-misc/irstlm/metadata.xml index 8e6fe0218..24343d654 100644 --- a/sci-misc/irstlm/metadata.xml +++ b/sci-misc/irstlm/metadata.xml @@ -5,12 +5,12 @@ <email>pavel.a.denisov@gmail.com</email> </maintainer> <longdescription lang="en"> - The IRST Language Modeling Toolkit features algorithms - and data structures suitable to estimate, store, and access very large LMs. - The software has been integrated into a popular open source Statistical Machine - Translation decoder called Moses, and is compatible with language models created - with other tools, such as the SRILM Tooolkit. - </longdescription> +The IRST Language Modeling Toolkit features algorithms +and data structures suitable to estimate, store, and access very large LMs. +The software has been integrated into a popular open source Statistical Machine +Translation decoder called Moses, and is compatible with language models created +with other tools, such as the SRILM Tooolkit. +</longdescription> <upstream> <remote-id type="github">irstlm-team/irstlm</remote-id> </upstream> diff --git a/sci-misc/jwnl/metadata.xml b/sci-misc/jwnl/metadata.xml index 3979667fa..09c9fed59 100644 --- a/sci-misc/jwnl/metadata.xml +++ b/sci-misc/jwnl/metadata.xml @@ -5,9 +5,9 @@ <email>flammie@gentoo.org</email> </maintainer> <longdescription> - Java based programming interface for accessing wordnet style dictionary - data. - </longdescription> +Java based programming interface for accessing wordnet style dictionary +data. +</longdescription> <upstream> <remote-id type="sourceforge">jwordnet</remote-id> </upstream> diff --git a/sci-misc/kaldi/metadata.xml b/sci-misc/kaldi/metadata.xml index 40ee7219c..df4524e1f 100644 --- a/sci-misc/kaldi/metadata.xml +++ b/sci-misc/kaldi/metadata.xml @@ -6,19 +6,19 @@ <name>Pavel Denisov</name> </maintainer> <longdescription lang="en"> - Kaldi is a toolkit for speech recognition written - in C++ and licensed under the Apache License v2.0. - Kaldi is intended for use by speech recognition researchers. - </longdescription> +Kaldi is a toolkit for speech recognition written +in C++ and licensed under the Apache License v2.0. +Kaldi is intended for use by speech recognition researchers. +</longdescription> <upstream> <remote-id type="github">kaldi-asr/kaldi</remote-id> </upstream> <use> <flag name="cuda"> - Build with CUDA support. - </flag> +Build with CUDA support. +</flag> <flag name="double-precision"> - Build in double precision mode. - </flag> +Build in double precision mode. +</flag> </use> </pkgmetadata> diff --git a/sci-misc/kotus-sanalista/metadata.xml b/sci-misc/kotus-sanalista/metadata.xml index 93547e56f..cfcdc4ea3 100644 --- a/sci-misc/kotus-sanalista/metadata.xml +++ b/sci-misc/kotus-sanalista/metadata.xml @@ -5,8 +5,8 @@ <email>flammie@gentoo.org</email> </maintainer> <longdescription lang="en"> - Kotus-sanalista is an XML list of Finnish words dictionary forms and - morphological data. It was released by Research Institute of Languages in - Finland. +Kotus-sanalista is an XML list of Finnish words dictionary forms and +morphological data. It was released by Research Institute of Languages in +Finland. </longdescription> </pkgmetadata> diff --git a/sci-misc/mitlm/metadata.xml b/sci-misc/mitlm/metadata.xml index 92171c498..0bafbbf32 100644 --- a/sci-misc/mitlm/metadata.xml +++ b/sci-misc/mitlm/metadata.xml @@ -5,12 +5,12 @@ <email>pavel.a.denisov@gmail.com</email> </maintainer> <longdescription lang="en"> - The MIT Language Modeling (MITLM) toolkit is a set of tools - designed for the efficient estimation of statistical n-gram - language models involving iterative parameter estimation. - It achieves much of its efficiency through the use of a compact - vector representation of n-grams. - </longdescription> +The MIT Language Modeling (MITLM) toolkit is a set of tools +designed for the efficient estimation of statistical n-gram +language models involving iterative parameter estimation. +It achieves much of its efficiency through the use of a compact +vector representation of n-grams. +</longdescription> <upstream> <remote-id type="github">mitlm/mitlm</remote-id> </upstream> diff --git a/sci-misc/nltk/metadata.xml b/sci-misc/nltk/metadata.xml index d0fd2f304..844f6974f 100644 --- a/sci-misc/nltk/metadata.xml +++ b/sci-misc/nltk/metadata.xml @@ -7,7 +7,7 @@ <longdescription> NLTK is collection of natural language tools written in python language. It also contains huge corpora. - </longdescription> +</longdescription> <upstream> <remote-id type="github">nltk/nltk</remote-id> </upstream> diff --git a/sci-misc/omorfi/metadata.xml b/sci-misc/omorfi/metadata.xml index 3da95cce4..738386c91 100644 --- a/sci-misc/omorfi/metadata.xml +++ b/sci-misc/omorfi/metadata.xml @@ -5,7 +5,7 @@ <email>flammie@gentoo.org</email> </maintainer> <longdescription lang="en"> - Omorfi is a free open source implementation of Finnish word form - morphology. +Omorfi is a free open source implementation of Finnish word form +morphology. </longdescription> </pkgmetadata> diff --git a/sci-misc/opennlp-maxent/metadata.xml b/sci-misc/opennlp-maxent/metadata.xml index cba0040bc..7ba312978 100644 --- a/sci-misc/opennlp-maxent/metadata.xml +++ b/sci-misc/opennlp-maxent/metadata.xml @@ -5,9 +5,9 @@ <email>flammie@gentoo.org</email> </maintainer> <longdescription> - Implementation of statistical classification using - maximum entropy models in opennlp framework. - </longdescription> +Implementation of statistical classification using +maximum entropy models in opennlp framework. +</longdescription> <upstream> <remote-id type="sourceforge">maxent</remote-id> </upstream> diff --git a/sci-misc/praat/metadata.xml b/sci-misc/praat/metadata.xml index 3fa08f083..8b2f625ef 100644 --- a/sci-misc/praat/metadata.xml +++ b/sci-misc/praat/metadata.xml @@ -5,9 +5,9 @@ <email>flammie@gentoo.org</email> </maintainer> <longdescription lang="en"> - Praat is a phonetic program for computer. It includes speech synthesis, - analysis and other tools. - </longdescription> +Praat is a phonetic program for computer. It includes speech synthesis, +analysis and other tools. +</longdescription> <upstream> <remote-id type="github">praat/praat</remote-id> </upstream> diff --git a/sci-misc/pywordnet/metadata.xml b/sci-misc/pywordnet/metadata.xml index fb4aa683d..bedc00164 100644 --- a/sci-misc/pywordnet/metadata.xml +++ b/sci-misc/pywordnet/metadata.xml @@ -6,7 +6,7 @@ </maintainer> <longdescription> Pywordnet contains python bindings to handle wordnet databases. - </longdescription> +</longdescription> <upstream> <remote-id type="sourceforge">pywordnet</remote-id> </upstream> diff --git a/sci-misc/sfst/metadata.xml b/sci-misc/sfst/metadata.xml index a94de54d8..e1523edf0 100644 --- a/sci-misc/sfst/metadata.xml +++ b/sci-misc/sfst/metadata.xml @@ -6,8 +6,8 @@ <description>N.B. This is used in my master’s thesis project</description> </maintainer> <longdescription> - SFST is open source package for compiling and using Finite State - Transducers, mainly for linguistic uses, made in university of - Stuttgart, Germany. +SFST is open source package for compiling and using Finite State +Transducers, mainly for linguistic uses, made in university of +Stuttgart, Germany. </longdescription> </pkgmetadata> diff --git a/sci-misc/stanford-parser/metadata.xml b/sci-misc/stanford-parser/metadata.xml index ca7b6fd9d..e462580bf 100644 --- a/sci-misc/stanford-parser/metadata.xml +++ b/sci-misc/stanford-parser/metadata.xml @@ -5,7 +5,7 @@ <email>flammie@gentoo.org</email> </maintainer> <longdescription> - Stanford parser is a natural language parser implemented in Java and using - statistical methods. It includes PCFG and dependency parsers. +Stanford parser is a natural language parser implemented in Java and using +statistical methods. It includes PCFG and dependency parsers. </longdescription> </pkgmetadata> diff --git a/sci-misc/stanford-tagger/metadata.xml b/sci-misc/stanford-tagger/metadata.xml index 0f76cee76..34ce89db4 100644 --- a/sci-misc/stanford-tagger/metadata.xml +++ b/sci-misc/stanford-tagger/metadata.xml @@ -5,7 +5,7 @@ <email>flammie@gentoo.org</email> </maintainer> <longdescription> - University of Stanford’s Natural language pos tagger. Uses log linear - pos taggers such as Maximum Entropy model tagging. +University of Stanford’s Natural language pos tagger. Uses log linear +pos taggers such as Maximum Entropy model tagging. </longdescription> </pkgmetadata> diff --git a/sci-physics/abinit/metadata.xml b/sci-physics/abinit/metadata.xml index b1c414c7c..d694831d1 100644 --- a/sci-physics/abinit/metadata.xml +++ b/sci-physics/abinit/metadata.xml @@ -22,39 +22,39 @@ ABINIT code, different utility programs are provided. <flag name="bigdft">Enable support for BigDFT, DFT package using wavelet basis set</flag> <flag name="cuda">Enable support for nVidia CUDA</flag> <flag name="cuda-double"> - Enable support for double precision nVidia CUDA - </flag> +Enable support for double precision nVidia CUDA +</flag> <flag name="etsf_io"> - Enable support for reading and writing the European Theoretical - Spectroscopy facility (ETSF) file format. - </flag> +Enable support for reading and writing the European Theoretical +Spectroscopy facility (ETSF) file format. +</flag> <flag name="fftw-threads"> - Use the threaded (openMP or pthreads) version of <pkg>sci-libs/fftw</pkg> - </flag> +Use the threaded (openMP or pthreads) version of <pkg>sci-libs/fftw</pkg> +</flag> <flag name="fftw-mpi"> - Use the MPI version of <pkg>sci-libs/fftw</pkg> (always with either openMP or pthreads too) - </flag> +Use the MPI version of <pkg>sci-libs/fftw</pkg> (always with either openMP or pthreads too) +</flag> <flag name="fox">Enable support for FoX Fortran XML library</flag> <flag name="levmar"> - Enable support for <pkg>sci-libs/levmar</pkg>, - the Levenberg-Marquardt least-squares optimisation - </flag> +Enable support for <pkg>sci-libs/levmar</pkg>, +the Levenberg-Marquardt least-squares optimisation +</flag> <flag name="libabinit"> - Build the libabinit used by <pkg>sci-libs/bigdft</pkg> - (usage not tested yet, circular dependency not resolved) - </flag> +Build the libabinit used by <pkg>sci-libs/bigdft</pkg> +(usage not tested yet, circular dependency not resolved) +</flag> <flag name="libxc">Enable support for libxc, an exchange-correlation potentials library</flag> <flag name="lotf">Activate the Learn on The Fly method (LOTF) for Molecular Dynamics</flag> <flag name="scalapack"> - Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing - </flag> +Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing +</flag> <flag name="scripts">Install helper scripts, mostly Python</flag> <flag name="vdwxc"> - Activate van der Waals exchange-correlation correction. Since 7.4.0 - no longer optional - </flag> +Activate van der Waals exchange-correlation correction. Since 7.4.0 +no longer optional +</flag> <flag name="wannier"> - Enable support for wannier90, a maximally localized Wannier functions (MLWFs) calculator - </flag> +Enable support for wannier90, a maximally localized Wannier functions (MLWFs) calculator +</flag> </use> </pkgmetadata> diff --git a/sci-physics/atompaw/metadata.xml b/sci-physics/atompaw/metadata.xml index e54afd060..d78d9cd39 100644 --- a/sci-physics/atompaw/metadata.xml +++ b/sci-physics/atompaw/metadata.xml @@ -13,31 +13,31 @@ <name>Honza Macháček</name> </maintainer> <longdescription lang="en"> - An utility for Projectors Augmented Waves dataset generation. +An utility for Projectors Augmented Waves dataset generation. - PAW calculations require, for each atomic species, a set of basis (partial-waves) and - projectors functions plus some additional atomic data stored in a PAW dataset. A PAW - dataset has to be generated in order to reproduce atomic behavior as accurately as possible - while requiring minimal CPU and memory resources in executing the DFT code for the - crystal simulations. These two constraints are conflicting. +PAW calculations require, for each atomic species, a set of basis (partial-waves) and +projectors functions plus some additional atomic data stored in a PAW dataset. A PAW +dataset has to be generated in order to reproduce atomic behavior as accurately as possible +while requiring minimal CPU and memory resources in executing the DFT code for the +crystal simulations. These two constraints are conflicting. - The code, originally written by N. A. W. Holzwarth, A. R. Tackett, and G. E. Matthews, - is described in the publication A Projector Augmented Wave (PAW) code for electronic - structure calculations, Part I: atompaw for generating atom-centered functions, Computer - Physics Communications 135 329-347 (2001). With the help of several collaborators - at Wake Forest University as well as several international collaborators, the code - has been continually updated and adapted for use with various electronic structure codes - including abinit, quantum-espresso, socorro, and pwpaw. - </longdescription> +The code, originally written by N. A. W. Holzwarth, A. R. Tackett, and G. E. Matthews, +is described in the publication A Projector Augmented Wave (PAW) code for electronic +structure calculations, Part I: atompaw for generating atom-centered functions, Computer +Physics Communications 135 329-347 (2001). With the help of several collaborators +at Wake Forest University as well as several international collaborators, the code +has been continually updated and adapted for use with various electronic structure codes +including abinit, quantum-espresso, socorro, and pwpaw. +</longdescription> <upstream> <doc>http://users.wfu.edu/natalie/papers/pwpaw/man.html</doc> </upstream> <use> <flag name="libxc">Enable support for libxc, an exchange-correlation potentials library</flag> <flag name="longplot"> - Patch the sources to plot functions all over the space considered, - not just up to the matching radius plus 50 grid points. May be useless - or even harmful. - </flag> +Patch the sources to plot functions all over the space considered, +not just up to the matching radius plus 50 grid points. May be useless +or even harmful. +</flag> </use> </pkgmetadata> diff --git a/sci-physics/bigdft/metadata.xml b/sci-physics/bigdft/metadata.xml index 887c8828f..56b5a0e32 100644 --- a/sci-physics/bigdft/metadata.xml +++ b/sci-physics/bigdft/metadata.xml @@ -7,20 +7,20 @@ </maintainer> <longdescription lang="en"> BigDFT is a DFT massively parallel electronic structure code (GPL license) using a wavelet basis set. Wavelets form a real space basis set distributed on an adaptive mesh (two levels of resolution in our implementation). GTH or HGH pseudopotentials are used to remove the core electrons. Thanks to our Poisson solver based on a Green function formalism, periodic systems, surfaces and isolated systems can be simulated with the proper boundary conditions. - </longdescription> +</longdescription> <use> <flag name="cuda">Enable support for nVidia CUDA GPU acceleration</flag> <flag name="etsf_io"> - Enable support for reading and writing the European Theoretical - Spectroscopy facility (ETSF) file format. - </flag> +Enable support for reading and writing the European Theoretical +Spectroscopy facility (ETSF) file format. +</flag> <flag name="glib"> - Compile with GLib Object System support - </flag> +Compile with GLib Object System support +</flag> <flag name="opencl">Enable support for OpenCL GPU acceleration</flag> <flag name="scalapack"> - Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing - </flag> +Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing +</flag> </use> <upstream> <remote-id type="launchpad">bigdft</remote-id> diff --git a/sci-physics/elk/metadata.xml b/sci-physics/elk/metadata.xml index 011bf8c83..d00045595 100644 --- a/sci-physics/elk/metadata.xml +++ b/sci-physics/elk/metadata.xml @@ -7,17 +7,17 @@ </maintainer> <longdescription lang="en"> Elk is an all-electron full-potential linearised augmented-plane wave (FP-LAPW) code with many advanced features. Written originally at Karl-Franzens-Universität Graz as a milestone of the EXCITING EU Research and Training Network, the code is designed to be as simple as possible so that new developments in the field of density functional theory (DFT) can be added quickly and reliably. The code is freely available under the GNU General Public License. - </longdescription> +</longdescription> <use> <flag name="libxc"> - Use sci-libs/libxc library of exchange-correlation functionals by ETSF. - </flag> +Use sci-libs/libxc library of exchange-correlation functionals by ETSF. +</flag> <flag name="perl"> - Install perl scripts. - </flag> +Install perl scripts. +</flag> <flag name="python"> - Install python scripts. - </flag> +Install python scripts. +</flag> </use> <upstream> <remote-id type="sourceforge">elk</remote-id> diff --git a/sci-physics/geant-vmc/metadata.xml b/sci-physics/geant-vmc/metadata.xml index 493072107..ef6deebdf 100644 --- a/sci-physics/geant-vmc/metadata.xml +++ b/sci-physics/geant-vmc/metadata.xml @@ -6,15 +6,15 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - The Virtual Monte Carlo (VMC) allows to run different simulation - Monte Carlo without changing the user code and therefore the input - and output format as well as the geometry and detector response - definition. - The core of the VMC is the category of classes vmc in ROOT. It - provides a set of interfaces which completely decouple the - dependencies between the user code and the concrete Monte Carlo. - Geant3 VMC (C++) is provided within a single package together with - GEANT3 (Fortran) - geant3. +The Virtual Monte Carlo (VMC) allows to run different simulation +Monte Carlo without changing the user code and therefore the input +and output format as well as the geometry and detector response +definition. +The core of the VMC is the category of classes vmc in ROOT. It +provides a set of interfaces which completely decouple the +dependencies between the user code and the concrete Monte Carlo. +Geant3 VMC (C++) is provided within a single package together with +GEANT3 (Fortran) - geant3. </longdescription> <use> <flag name="vgm">Enable the Virtual Geometry Model (<pkg>sci-physics/vgm</pkg>)</flag> diff --git a/sci-physics/genfit/metadata.xml b/sci-physics/genfit/metadata.xml index ca2316320..90b22390e 100644 --- a/sci-physics/genfit/metadata.xml +++ b/sci-physics/genfit/metadata.xml @@ -6,31 +6,31 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - GENFIT is an experiment-independent framework for track reconstruction for - particle and nuclear physics. It consists of three modular components: - - Track fitting algorithms - Currently, GENFIT contains a Kalman Filter and a - Deterministic Annealing Filter. - Other algorithm modules can be added easily. - - Track representations - These modules hold the data of track track parameters and can perform - extrapolations of these parameters. - GENFIT is distributed with two well-tested track representations. - Existing track extrapolation codes can be interfaced in a very - straightforward way in this framework, using their native geometry - and magnetic field interfaces. - - Reconstruction hits - The hit dimensionality and the orientation of planar tracking detectors - can be chosen freely. - GENFIT is especially useful for tracking systems which include detectors - which do not measure the passage of particles on predefined planes, - like TPCs or wire-based drift chambers. The concept of so-called - virtual detector planes provides a simple mechanism to use these - detector hits in a transparent way without any geometrical simplifications. - GENFIT has been developed in the framework of the PANDA experiment at - FAIR, Darmstadt, Germany. - It is also used in the Belle-2, Fopi, and GEM-TPC experiments. - </longdescription> +GENFIT is an experiment-independent framework for track reconstruction for +particle and nuclear physics. It consists of three modular components: +- Track fitting algorithms +Currently, GENFIT contains a Kalman Filter and a +Deterministic Annealing Filter. +Other algorithm modules can be added easily. +- Track representations +These modules hold the data of track track parameters and can perform +extrapolations of these parameters. +GENFIT is distributed with two well-tested track representations. +Existing track extrapolation codes can be interfaced in a very +straightforward way in this framework, using their native geometry +and magnetic field interfaces. +- Reconstruction hits +The hit dimensionality and the orientation of planar tracking detectors +can be chosen freely. +GENFIT is especially useful for tracking systems which include detectors +which do not measure the passage of particles on predefined planes, +like TPCs or wire-based drift chambers. The concept of so-called +virtual detector planes provides a simple mechanism to use these +detector hits in a transparent way without any geometrical simplifications. +GENFIT has been developed in the framework of the PANDA experiment at +FAIR, Darmstadt, Germany. +It is also used in the Belle-2, Fopi, and GEM-TPC experiments. +</longdescription> <upstream> <remote-id type="sourceforge">genfit</remote-id> </upstream> diff --git a/sci-physics/mc-tester/metadata.xml b/sci-physics/mc-tester/metadata.xml index d5c644419..53b89a9c9 100644 --- a/sci-physics/mc-tester/metadata.xml +++ b/sci-physics/mc-tester/metadata.xml @@ -9,7 +9,7 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription> - A universal tool for comparisons of Monte Carlo predictions in High Energy Physics +A universal tool for comparisons of Monte Carlo predictions in High Energy Physics </longdescription> <use> <flag name="hepmc">Compile <pkg>sci-physics/hepmc</pkg> interface</flag> diff --git a/sci-physics/root/metadata.xml b/sci-physics/root/metadata.xml index 0c8f9b1b2..6c223c096 100644 --- a/sci-physics/root/metadata.xml +++ b/sci-physics/root/metadata.xml @@ -10,12 +10,12 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - ROOT Object Oriented Technologies is an object oriented data - analysis framework written in C++ by the CERN. Widely used in - high energy physics, but also in other data analysis applications. It - contains the CINT C/C++ interpreter and many classes such as - statistics, serialization, optimization, linear algebra, graphics, - GUI toolkit, and a complete visualization framework. +ROOT Object Oriented Technologies is an object oriented data +analysis framework written in C++ by the CERN. Widely used in +high energy physics, but also in other data analysis applications. It +contains the CINT C/C++ interpreter and many classes such as +statistics, serialization, optimization, linear algebra, graphics, +GUI toolkit, and a complete visualization framework. </longdescription> <use> <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag> diff --git a/sci-physics/tauola/metadata.xml b/sci-physics/tauola/metadata.xml index 156973cdd..1afd606d4 100644 --- a/sci-physics/tauola/metadata.xml +++ b/sci-physics/tauola/metadata.xml @@ -9,7 +9,7 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription> - tau decay Monte Carlo generator +tau decay Monte Carlo generator </longdescription> <use> <flag name="hepmc">Compile <pkg>sci-physics/hepmc</pkg> interface</flag> diff --git a/sci-physics/vgm/metadata.xml b/sci-physics/vgm/metadata.xml index e1161fd12..dba956aa1 100644 --- a/sci-physics/vgm/metadata.xml +++ b/sci-physics/vgm/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - The Virtual Geometry Model (VGM) is an - abstraction layer between the Geant4 and ROOT software. +The Virtual Geometry Model (VGM) is an +abstraction layer between the Geant4 and ROOT software. </longdescription> <use> <flag name="geant4">Enable interaction with Geant4(<pkg>sci-physics/geant</pkg>:4) </flag> diff --git a/sci-visualization/forge/metadata.xml b/sci-visualization/forge/metadata.xml index b328860fa..3e7207c7f 100644 --- a/sci-visualization/forge/metadata.xml +++ b/sci-visualization/forge/metadata.xml @@ -10,12 +10,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - A prototype of the OpenGL interop library that can be used with - ArrayFire. The goal of Forge is to provide high performance OpenGL - visualizations for C/C++ applications that use CUDA/OpenCL. Forge - uses OpenGL >=3.3 forward compatible contexts, so please make sure - you have capable hardware before trying it out. - </longdescription> +A prototype of the OpenGL interop library that can be used with +ArrayFire. The goal of Forge is to provide high performance OpenGL +visualizations for C/C++ applications that use CUDA/OpenCL. Forge +uses OpenGL >=3.3 forward compatible contexts, so please make sure +you have capable hardware before trying it out. +</longdescription> <upstream> <remote-id type="github">arrayfire/forge</remote-id> </upstream> diff --git a/sci-visualization/mricrogl/metadata.xml b/sci-visualization/mricrogl/metadata.xml index 027d04271..a9107b897 100644 --- a/sci-visualization/mricrogl/metadata.xml +++ b/sci-visualization/mricrogl/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - MRIcroGL is a program designed to display 3D medical imaging. - By using your computer's graphics card, it can allow real-time - interactive rendering. It includes scripts to show you some of - the many effects. - </longdescription> +MRIcroGL is a program designed to display 3D medical imaging. +By using your computer's graphics card, it can allow real-time +interactive rendering. It includes scripts to show you some of +the many effects. +</longdescription> <upstream> <remote-id type="github">neurolabusc/MRIcroGL</remote-id> </upstream> diff --git a/sci-visualization/mricron/metadata.xml b/sci-visualization/mricron/metadata.xml index 164af13ca..4e582b27d 100644 --- a/sci-visualization/mricron/metadata.xml +++ b/sci-visualization/mricron/metadata.xml @@ -6,8 +6,8 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - MRIcron is a simple medical imaging visualization tool written in Lazarus. - </longdescription> +MRIcron is a simple medical imaging visualization tool written in Lazarus. +</longdescription> <upstream> <remote-id type="github">neurolabusc/MRIcron</remote-id> </upstream> diff --git a/sci-visualization/nodemon/metadata.xml b/sci-visualization/nodemon/metadata.xml index 247df48ac..3bbffb9b5 100644 --- a/sci-visualization/nodemon/metadata.xml +++ b/sci-visualization/nodemon/metadata.xml @@ -13,7 +13,7 @@ NodeMon is a distributed visualization tool for monitoring system resource utilization. It is primarily intended for clusters and large-scale NUMA systems. - </longdescription> +</longdescription> <use> <flag name="pbs">Enable support for the Portable Batch System.</flag> </use> diff --git a/sci-visualization/surf-ice/metadata.xml b/sci-visualization/surf-ice/metadata.xml index 434c6e79a..8c0be2bba 100644 --- a/sci-visualization/surf-ice/metadata.xml +++ b/sci-visualization/surf-ice/metadata.xml @@ -10,13 +10,13 @@ <name>Horea Christian</name> </maintainer> <longdescription lang="en"> - Surf Ice is an open source surface render. It supports - mesh formats including 3DS, CTM, DXF, FreeSurfer, GII - (GIfTI), GTS, LWO2, MS3D, MZ3, NV (BrainNetViewer), OBJ, - OFF, PLY, STL, VTK. It also supports tractography formats - including BFloat, PDB, TCK, TRK, and VTK. Further, the - software supports the NIfTI voxelwise format - </longdescription> +Surf Ice is an open source surface render. It supports +mesh formats including 3DS, CTM, DXF, FreeSurfer, GII +(GIfTI), GTS, LWO2, MS3D, MZ3, NV (BrainNetViewer), OBJ, +OFF, PLY, STL, VTK. It also supports tractography formats +including BFloat, PDB, TCK, TRK, and VTK. Further, the +software supports the NIfTI voxelwise format +</longdescription> <upstream> <remote-id type="github">neurolabusc/surf-ice</remote-id> </upstream> diff --git a/sci-visualization/yt/metadata.xml b/sci-visualization/yt/metadata.xml index 4d8ce0f34..5957457f4 100644 --- a/sci-visualization/yt/metadata.xml +++ b/sci-visualization/yt/metadata.xml @@ -10,11 +10,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription>yt is an analysis and visualization system written in Python, - designed for use with Astrophysical Simulation codes. yt can process data in a - myriad of ways and make a variety of visualizations. It is designed to be portable - across simulation codes, and it is developed by developers from a variety of - institutions and backgrounds. - </longdescription> +designed for use with Astrophysical Simulation codes. yt can process data in a +myriad of ways and make a variety of visualizations. It is designed to be portable +across simulation codes, and it is developed by developers from a variety of +institutions and backgrounds. +</longdescription> <upstream> <remote-id type="pypi">yt</remote-id> </upstream> diff --git a/sys-cluster/htcondor/metadata.xml b/sys-cluster/htcondor/metadata.xml index 40cc4e0b3..3846c294e 100644 --- a/sys-cluster/htcondor/metadata.xml +++ b/sys-cluster/htcondor/metadata.xml @@ -9,16 +9,16 @@ <name>Gentoo Cluster Project</name> </maintainer> <longdescription lang="en"> - HTCondor is a open-source, specialized workload management system for - compute-intensive jobs. Like other full-featured batch systems, HTCondor - provides a job queueing mechanism, scheduling policy, priority scheme, - resource monitoring, and resource management. Users submit their serial - or parallel jobs to HTCondor, HTCondor places them into a queue, chooses - when and where to run the jobs based upon a policy, carefully monitors - their progress, and ultimately informs the user upon completion. HTCondor - also contains mechanisms to submit jobs to grid-sites and supports many - different grid toolkits. - </longdescription> +HTCondor is a open-source, specialized workload management system for +compute-intensive jobs. Like other full-featured batch systems, HTCondor +provides a job queueing mechanism, scheduling policy, priority scheme, +resource monitoring, and resource management. Users submit their serial +or parallel jobs to HTCondor, HTCondor places them into a queue, chooses +when and where to run the jobs based upon a policy, carefully monitors +their progress, and ultimately informs the user upon completion. HTCondor +also contains mechanisms to submit jobs to grid-sites and supports many +different grid toolkits. +</longdescription> <use> <flag name="boinc">Enable backfill with BOINC jobs when the cluster is not being used</flag> <flag name="cgroup">Use <pkg>dev-libs/libcgroup</pkg> for kernel control groups</flag> diff --git a/sys-cluster/modules/metadata.xml b/sys-cluster/modules/metadata.xml index fefc52f77..60ab20673 100644 --- a/sys-cluster/modules/metadata.xml +++ b/sys-cluster/modules/metadata.xml @@ -10,12 +10,12 @@ <name>Gentoo Cluster Project</name> </maintainer> <longdescription lang="en"> - The environment modules package provides for an easy dynamic - modification of a user's environment via modulefiles. which - typically instruct the module command to alter or set shell - environment variables such as PATH, MANPATH, etc. as well as define - aliases over a variety of shells. - </longdescription> +The environment modules package provides for an easy dynamic +modification of a user's environment via modulefiles. which +typically instruct the module command to alter or set shell +environment variables such as PATH, MANPATH, etc. as well as define +aliases over a variety of shells. +</longdescription> <upstream> <remote-id type="sourceforge">modules</remote-id> </upstream> diff --git a/sys-cluster/openmpi/metadata.xml b/sys-cluster/openmpi/metadata.xml index eb1125c2a..08b693bf5 100644 --- a/sys-cluster/openmpi/metadata.xml +++ b/sys-cluster/openmpi/metadata.xml @@ -12,7 +12,7 @@ <flag name="cma">Enable the CMA (Cross Memory Attach) MCA</flag> <flag name="cuda">Add GPU direct support</flag> <flag name="heterogeneous">Enable features required for heterogeneous - platform support</flag> +platform support</flag> <flag name="romio">Build the ROMIO MPI-IO component</flag> <flag name="mpi-threads">Enable MPI_THREAD_MULTIPLE</flag> <flag name="numa">Enable numactl to allow binding processes to CPUs</flag> diff --git a/sys-cluster/ovis/metadata.xml b/sys-cluster/ovis/metadata.xml index 0b76ff6c8..d1bfe2ae9 100644 --- a/sys-cluster/ovis/metadata.xml +++ b/sys-cluster/ovis/metadata.xml @@ -9,9 +9,9 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - The OVIS project addresses scalable, real-time statistical analysis of - very large data sets. It contains tools for intelligent, real-time - monitoring of large computational clusters and lossless, deterministic - log message clustering. +The OVIS project addresses scalable, real-time statistical analysis of +very large data sets. It contains tools for intelligent, real-time +monitoring of large computational clusters and lossless, deterministic +log message clustering. </longdescription> </pkgmetadata> diff --git a/sys-cluster/pyslice/metadata.xml b/sys-cluster/pyslice/metadata.xml index 6088e6841..7624e48f8 100644 --- a/sys-cluster/pyslice/metadata.xml +++ b/sys-cluster/pyslice/metadata.xml @@ -7,7 +7,7 @@ </maintainer> <longdescription> Templating system for parametric modeling. - </longdescription> +</longdescription> <upstream> <remote-id type="pypi">pyslice</remote-id> <remote-id type="sourceforge">pyslice</remote-id> diff --git a/virtual/blacs/metadata.xml b/virtual/blacs/metadata.xml index e67e1faad..5f25087f3 100644 --- a/virtual/blacs/metadata.xml +++ b/virtual/blacs/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Gentoo virtual package for the Basic Linear Algebra Communication Subprograms implementation. +Gentoo virtual package for the Basic Linear Algebra Communication Subprograms implementation. </longdescription> <use> <flag name="int64">Add eselect module for blas libraries built with 64 bits - integer ABI</flag> +integer ABI</flag> </use> </pkgmetadata> diff --git a/virtual/blas/metadata.xml b/virtual/blas/metadata.xml index 560890ba6..f683eb986 100644 --- a/virtual/blas/metadata.xml +++ b/virtual/blas/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Gentoo virtual package for the Basic Linear Algebra Subprograms - FORTRAN 77 implementation. +Gentoo virtual package for the Basic Linear Algebra Subprograms +FORTRAN 77 implementation. </longdescription> <use> <flag name="int64">Add eselect module for blas libraries built with 64 bits - integer ABI</flag> +integer ABI</flag> </use> </pkgmetadata> diff --git a/virtual/cblas/metadata.xml b/virtual/cblas/metadata.xml index 54c108f30..1f78cc421 100644 --- a/virtual/cblas/metadata.xml +++ b/virtual/cblas/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Gentoo virtual package for the Basic Linear Algebra Subprograms - C implementation. +Gentoo virtual package for the Basic Linear Algebra Subprograms +C implementation. </longdescription> <use> <flag name="int64">Add eselect module for cblas libraries built with 64 bits - integer ABI</flag> +integer ABI</flag> </use> </pkgmetadata> diff --git a/virtual/geant/metadata.xml b/virtual/geant/metadata.xml index 778e31cc0..723432dfb 100644 --- a/virtual/geant/metadata.xml +++ b/virtual/geant/metadata.xml @@ -6,6 +6,6 @@ <name>Gentoo Physics Project</name> </maintainer> <longdescription lang="en"> - Gentoo virtual package for GEANT-3 implementation +Gentoo virtual package for GEANT-3 implementation </longdescription> </pkgmetadata> diff --git a/virtual/lapack/metadata.xml b/virtual/lapack/metadata.xml index 8c595d98c..6148c6b10 100644 --- a/virtual/lapack/metadata.xml +++ b/virtual/lapack/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Gentoo virtual package for the Linear Algebra PACKAge - FORTRAN 77 implementation. The version number corresponds to the - version of the LAPACK reference implementation. +Gentoo virtual package for the Linear Algebra PACKAge +FORTRAN 77 implementation. The version number corresponds to the +version of the LAPACK reference implementation. </longdescription> <use> <flag name="int64">Add eselect module for lapack libraries built with 64 bits - integer ABI</flag> +integer ABI</flag> </use> </pkgmetadata> diff --git a/virtual/lapacke/metadata.xml b/virtual/lapacke/metadata.xml index 1417d5179..52b90821b 100644 --- a/virtual/lapacke/metadata.xml +++ b/virtual/lapacke/metadata.xml @@ -6,11 +6,11 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Gentoo virtual package for the Linear Algebra PACKAge - C implementation. +Gentoo virtual package for the Linear Algebra PACKAge +C implementation. </longdescription> <use> <flag name="int64">Add eselect module for blas libraries built with 64 bits - integer ABI</flag> +integer ABI</flag> </use> </pkgmetadata> diff --git a/virtual/scalapack/metadata.xml b/virtual/scalapack/metadata.xml index bbfa377f1..a39ef098a 100644 --- a/virtual/scalapack/metadata.xml +++ b/virtual/scalapack/metadata.xml @@ -6,12 +6,12 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription lang="en"> - Gentoo virtual package for the Scalable LAPACK implementation. The - version number corresponds to the version of the ScaLAPACK reference - implementation. +Gentoo virtual package for the Scalable LAPACK implementation. The +version number corresponds to the version of the ScaLAPACK reference +implementation. </longdescription> <use> <flag name="int64">Add eselect module for blas libraries built with 64 bits - integer ABI</flag> +integer ABI</flag> </use> </pkgmetadata> diff --git a/x11-libs/agg/metadata.xml b/x11-libs/agg/metadata.xml index e5a557aa7..26de58ba4 100644 --- a/x11-libs/agg/metadata.xml +++ b/x11-libs/agg/metadata.xml @@ -6,10 +6,10 @@ <name>Gentoo Science Project</name> </maintainer> <longdescription> - Anti-Grain Geometry (AGG) is a general purpose graphical toolkit - written completely in standard and platform independent C++. It can be used - in many areas of computer programming where high quality 2D graphics is an - essential part of the project. +Anti-Grain Geometry (AGG) is a general purpose graphical toolkit +written completely in standard and platform independent C++. It can be used +in many areas of computer programming where high quality 2D graphics is an +essential part of the project. </longdescription> <use> <flag name="gpc">Enable gpc polygon clipper library</flag> |