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-rw-r--r--sci-libs/libgeodecomp/Manifest1
-rw-r--r--sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild36
-rw-r--r--sci-libs/silo/Manifest1
-rw-r--r--sci-libs/silo/files/silo-4.9.1-qtlibs.patch66
-rw-r--r--sci-libs/silo/metadata.xml18
-rw-r--r--sci-libs/silo/silo-4.9.1.ebuild35
6 files changed, 157 insertions, 0 deletions
diff --git a/sci-libs/libgeodecomp/Manifest b/sci-libs/libgeodecomp/Manifest
index 405630e3e..f9f5d7631 100644
--- a/sci-libs/libgeodecomp/Manifest
+++ b/sci-libs/libgeodecomp/Manifest
@@ -1,2 +1,3 @@
DIST libgeodecomp-0.1.0.tar.bz2 581136 SHA256 71442a60e7cc5c3f38e462d5d52010a948bd089759487687f217e4dec4dffae5 SHA512 56de4e6bfc92f8dda4d4931559a553a7a2c847205637394ea87f73dfb5a34776cb043beba2857bbe07c52a61ed457f22b7d76e4e23c183c8bd25868d36df4704 WHIRLPOOL df2b5c6830dbc92befd873bdced1712687046a43e814f7676271a2041a58c9e2562a86c6b4034343499f813136f38e298b33fa9a67911b726f42f323f666b03e
DIST libgeodecomp-0.2.0.tar.bz2 672860 SHA256 6137061ae9f6589759a86fb1bad1a5e56b345f6c48cd753927ff4dc7ed541ad1 SHA512 e8aea7d86605837a76a3af23a28c2093f86a531239b3796c084a27b3e0d5bd32df44c2f7bc8a6530307aa40b0cbadb587ad8285e55534816548405bc8e2e6d75 WHIRLPOOL dd62161ffd76bbec0367383c57aab2af9661bccb92cdc1a91f5e3dfd4208913d517f2bfb3c27d513d58fc48718bd3f0abf983e92deacd535c5d0928bf6f44db4
+DIST libgeodecomp-0.3.1.tar.bz2 740341 SHA256 3c49a238472a82be3a6e2411a20bda85672aac01d4a87bb0e63ccbff1385ea64 SHA512 28f0ea04e45cb0a5b81b18efd3e3a011d58c077562f8039ff42e701cc362f86dff90bd505690ec22c8a42e9de1236d5b6c61d288ad4c154289e92700a2a7fcc0 WHIRLPOOL 3827974861556ab84a16e81b8cece2cff4d9e88a1559d99192fa47efd571639b252423038b3b579811c7d57452e94ae96b99f7209e87af46b752b5a193dc9994
diff --git a/sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild b/sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild
new file mode 100644
index 000000000..4c41adc28
--- /dev/null
+++ b/sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild
@@ -0,0 +1,36 @@
+# Copyright 2013-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit cmake-utils
+
+DESCRIPTION="An auto-parallelizing library to speed up computer simulations"
+HOMEPAGE="http://www.libgeodecomp.org"
+SRC_URI="http://www.libgeodecomp.org/archive/${P}.tar.bz2"
+
+SLOT="0"
+LICENSE="LGPL-3"
+KEYWORDS="~amd64 ~ppc ~x86"
+IUSE="doc"
+
+RDEPEND=">=dev-libs/boost-1.48"
+DEPEND="${RDEPEND}"
+
+S="${WORKDIR}/${P}/src"
+
+src_compile() {
+ cmake-utils_src_compile
+ use doc && cmake-utils_src_make doc
+}
+
+src_install() {
+ DOCS=( ../README )
+ use doc && HTML_DOCS=( ../doc/html/* )
+ cmake-utils_src_install
+}
+
+src_test() {
+ cmake-utils_src_make test
+}
diff --git a/sci-libs/silo/Manifest b/sci-libs/silo/Manifest
new file mode 100644
index 000000000..dcd0e04f5
--- /dev/null
+++ b/sci-libs/silo/Manifest
@@ -0,0 +1 @@
+DIST silo-4.9.1.tar.gz 12038537 SHA256 4908eb77577e26948aedee5976deedc3d2c1fd01b6fc5bd9cb61772cbbe2a56e SHA512 512e16ec6bd62deb3596d918895a0c82606a9f519345e4c4abd1a19eb40172576b70313472b75ae4183ee9d86a0f19443504f232ca6e633b1652f9d547927b83 WHIRLPOOL 7cd875ce28bac86cbe68e931d95cf5543671aa7142ab672f5bdc23da9467eb6b755b2e8f06bb2871686aa01e835a5495697a454bcb36153adf86be09735219d9
diff --git a/sci-libs/silo/files/silo-4.9.1-qtlibs.patch b/sci-libs/silo/files/silo-4.9.1-qtlibs.patch
new file mode 100644
index 000000000..e8fc4284c
--- /dev/null
+++ b/sci-libs/silo/files/silo-4.9.1-qtlibs.patch
@@ -0,0 +1,66 @@
+diff -ru silo-4.9.1-old/configure silo-4.9.1-new/configure
+--- silo-4.9.1-old/configure 2014-01-18 23:19:15.755030306 +0100
++++ silo-4.9.1-new/configure 2014-01-18 23:20:52.595031159 +0100
+@@ -27503,7 +27503,7 @@
+ ax_qt_lib="`ls $ax_qt_lib_dir/libQt* | sed -n 1p |
+ sed s@$ax_qt_lib_dir/lib@@ | sed s@[.].*@@`"
+ fi
+- ax_qt_LIBS="-L$ax_qt_lib_dir -l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
++ ax_qt_LIBS="-L$ax_qt_lib_dir -l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lQtCore -lQtGui -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
+ else
+ # Use cached value or do search, starting with suggestions from
+ # the command line
+@@ -27577,7 +27577,7 @@
+ ax_qt_lib="`ls $ax_qt_lib_dir/libQt* | sed -n 1p |
+ sed s@$ax_qt_lib_dir/lib@@ | sed s@[.].*@@`"
+ fi
+- ax_qt_LIBS="-L$ax_qt_lib_dir -l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
++ ax_qt_LIBS="-L$ax_qt_lib_dir -l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lQtCore -lQtGui -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
+ else
+ # There is no valid definition for $QTDIR as Trolltech likes to see it
+ ax_qt_dir=
+@@ -27589,7 +27589,7 @@
+ ax_qt_lib="`ls $ax_qt_lib_dir/libQt* | sed -n 1p |
+ sed s@$ax_qt_lib_dir/lib@@ | sed s@[.].*@@`"
+ fi
+- ax_qt_LIBS="-L$ax_qt_lib_dir -l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
++ ax_qt_LIBS="-L$ax_qt_lib_dir -l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lQtCore -lQtGui -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
+ else
+ # Normally, when there is no traditional Trolltech installation,
+ # the library is installed in a place where the linker finds it
+@@ -27607,7 +27607,7 @@
+ # See if we find the library without any special options.
+ # Don't add top $LIBS permanently yet
+ ax_save_LIBS="$LIBS"
+- LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
++ LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lQtCore -lQtGui -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
+ ax_qt_LIBS="$LIBS"
+ ax_save_CXXFLAGS="$CXXFLAGS"
+ CXXFLAGS="-I$ax_qt_include_dir -I$ax_qt_include_dir/Qt -I$ax_qt_include_dir/QtCore -I$ax_qt_include_dir/QtGui"
+@@ -27668,7 +27668,7 @@
+ # That did not work. Try the multi-threaded version
+ echo "Non-critical error, please neglect the above." >&5
+ ax_qt_lib=qt-mt
+- LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
++ LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lQtCore -lQtGui -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
+ cat >conftest.$ac_ext <<_ACEOF
+ /* confdefs.h. */
+ _ACEOF
+@@ -27726,7 +27726,7 @@
+ # That did not work. Try the OpenGL version
+ echo "Non-critical error, please neglect the above." >&5
+ ax_qt_lib=qt-gl
+- LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
++ LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lQtCore -lQtGui -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
+ cat >conftest.$ac_ext <<_ACEOF
+ /* confdefs.h. */
+ _ACEOF
+@@ -27809,7 +27809,7 @@
+ fi
+ done
+ # Try with that one
+- LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
++ LIBS="-l$ax_qt_lib $X_PRE_LIBS $X_LIBS -lQtCore -lQtGui -lX11 -lXext -lXmu -lXt -lXi $X_EXTRA_LIBS"
+ cat >conftest.$ac_ext <<_ACEOF
+ /* confdefs.h. */
+ _ACEOF
diff --git a/sci-libs/silo/metadata.xml b/sci-libs/silo/metadata.xml
new file mode 100644
index 000000000..2ee5908ca
--- /dev/null
+++ b/sci-libs/silo/metadata.xml
@@ -0,0 +1,18 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>cluster</herd>
+ <longdescription>
+ Silo is a library for reading and writing a wide variety of
+ scientific data to binary, disk files. The files Silo produces and
+ the data within them can be easily shared and exchanged between
+ wholly independently developed applications running on disparate
+ computing platforms.
+ </longdescription>
+ <use>
+ <flag name="silex">Build silex data browser</flag>
+ </use>
+ <maintainer>
+ <email>gentryx@gmx.de</email>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-libs/silo/silo-4.9.1.ebuild b/sci-libs/silo/silo-4.9.1.ebuild
new file mode 100644
index 000000000..775f14096
--- /dev/null
+++ b/sci-libs/silo/silo-4.9.1.ebuild
@@ -0,0 +1,35 @@
+# Copyright 2013-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit eutils
+
+DESCRIPTION="A mesh and field I/O library and scientific database"
+HOMEPAGE="https://wci.llnl.gov/codes/silo"
+SRC_URI="https://wci.llnl.gov/codes/silo/${P}/${P}.tar.gz"
+
+SLOT="0"
+LICENSE="BSD"
+KEYWORDS="~amd64"
+IUSE="hdf5 qt4 +silex"
+
+REQUIRED_USE="silex? ( qt4 )"
+
+RDEPEND="
+ hdf5? ( sci-libs/hdf5 )
+ qt4? ( dev-qt/qtgui:4 )"
+DEPEND="${RDEPEND}"
+
+src_prepare() {
+ epatch "${FILESDIR}/${P}-qtlibs.patch"
+}
+
+src_configure() {
+ econf \
+ $(use_enable silex silex ) \
+ $(use_with qt4 Qt-lib-dir "${EPREFIX}"/usr/lib${LIB_LOCATION_SUFFIX}/qt4 ) \
+ $(use_with qt4 Qt-include-dir "${EPREFIX}"/usr/include/qt4 ) \
+ $(use_with hdf5 hdf5 ${EPREFIX}"/usr/include,${EPREFIX}"/usr/lib${LIB_LOCATION_SUFFIX} )
+}