diff options
| -rw-r--r-- | sci-chemistry/bist/ChangeLog | 30 | ||||
| -rw-r--r-- | sci-chemistry/bist/Manifest | 26 | ||||
| -rw-r--r-- | sci-chemistry/bist/bist-0.5.1-r1.ebuild | 30 | ||||
| -rw-r--r-- | sci-chemistry/bist/files/bist-0.5.1-bracket.patch | 11 | ||||
| -rw-r--r-- | sci-chemistry/bist/files/bist-0.5.1-install.patch | 80 | ||||
| -rw-r--r-- | sci-chemistry/bist/metadata.xml | 13 |
6 files changed, 190 insertions, 0 deletions
diff --git a/sci-chemistry/bist/ChangeLog b/sci-chemistry/bist/ChangeLog new file mode 100644 index 000000000..543e6afd1 --- /dev/null +++ b/sci-chemistry/bist/ChangeLog @@ -0,0 +1,30 @@ +# ChangeLog for sci-chemistry/bist +# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + + 22 Aug 2010; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> + Moved from sunrise to sci overlay. + + 25 Sep 2009; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> + +bist-0.5.1-r1.ebuild, +files/bist-0.5.1-bracket.patch, + -files/wrap_bracket_dialog-amd64.patch, -bist-0.5.1.ebuild, + +files/bist-0.5.1-install.patch: + Fixed installation of plugins, help files, molecule library, + internationalization, man page, desktop file, and icon. + + 21 Sep 2009; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> + -bist-0.4.7.ebuild, +bist-0.5.1.ebuild: + Version bump and upgrade of the ebuild to EAPI=2 + + 20 Sep 2009; Thomas Sachau (Tommy[D]) <tommy@gentoo.org> + bist-0.4.7.ebuild: + Drop dependency on gcc + + 06 Oct 2008; Tomáš Chvátal <tomas.chvatal@gmail.com> bist-0.4.7.ebuild: + Fix Depend/Rdepend issue about gcc + + 30 Sep 2008; Giuseppe Marco Randazzo <gmrandazzo@gmail.com> + +files/wrap_bracket_dialog-amd64.patch, +bist-0.4.7.ebuild, +metadata.xml: + New Ebuild sci-chemistry/bist for bug 239172 thanks to Giuseppe Marco + Randazzo aka zeld + diff --git a/sci-chemistry/bist/Manifest b/sci-chemistry/bist/Manifest new file mode 100644 index 000000000..a5ff6b6ec --- /dev/null +++ b/sci-chemistry/bist/Manifest @@ -0,0 +1,26 @@ +-----BEGIN PGP SIGNED MESSAGE----- +Hash: SHA1 + +AUX bist-0.5.1-bracket.patch 379 RMD160 4d9d835a8c189862ec53f069862069a005b4c4ff SHA1 7c6ec5afb2bf2f1d6bc4ed931c5dbf03fe2abb98 SHA256 3fd94f204a237d3b00c2fd86b45259f65ac31606ebfe7ab076c3e24f8f855671 +AUX bist-0.5.1-install.patch 4074 RMD160 35136ca7aa40e34c543efae3def45ced6d9d2886 SHA1 fc69c1a111ca724409674a35b40d7bc342b99388 SHA256 b94add3bed813222d29f4156668668c3296f6d817eb8f097709fcabd37d5ae67 +DIST bist-0.5.1.tar.gz 766731 RMD160 a848cf778c9096239ca964dce352eeeab1ee4dc2 SHA1 22fd8186ef3a4fcc2776a3cf5b57ca78bfb4ab69 SHA256 78809230e2bcfffefaf8f95d85740d94cf2d10b4dd0d746f28cf1e82e4fc6cd5 +EBUILD bist-0.5.1-r1.ebuild 694 RMD160 a2b89ddcb1739df0f8ba9ecbfb437604f43fdb52 SHA1 dbfc9b9482d687ffbd7d86afc912f11585140621 SHA256 2d1a05d6bc8ad7e62b1e6cdde75d006cbc12d7aa2595c9ad4d3668833af6fd61 +MISC ChangeLog 1179 RMD160 09e71b55f8d994d4fec7f640cacf6ca8cdf25c79 SHA1 d60db59280ec2d855eb0888cfd772ed3ff641e4e SHA256 da7f51562f12111b0f707b85d39178c35191fe0f79e28c3facada9b4f3c99185 +MISC metadata.xml 1221 RMD160 a53092870d168cb265d2eef41a1556975b161846 SHA1 4c7dd7b7dfc788161a06815502785e1b6f2d9f7a SHA256 3469c6fb0fedd54e56f8961a7e1b6fc6aa23a6ace1d18b89a4a87ef2748fe164 +-----BEGIN PGP SIGNATURE----- +Version: GnuPG v2.0.16 (GNU/Linux) + +iQIcBAEBAgAGBQJMcZKVAAoJENwGBM22xffewB0P/izoz6rzjRp8dCZxrEohD7RX +u4h+HIdY4+xD7HNa9AoJC9hO48YKmZ+ggH/pWIM9UtHmbZIlhRgFsV1wQlyP6V/o +mS1mNuguTFI9v6B3KM8syL7nNPvtTfBXExgOouBjnLExtGG2B5+2crnGGKY5NW/K +xkGI9gRpt1jgUjjY74zkF+4YEeKPKd1M9CRr9VwMfn+gRQExxYY4v4R0579fqBux +OdL221kqIV59KpDWmaqiXDssEAjZzk+vefrvqkyhL4ZCPRLuO8suYU/m43zMb0lF +vMV7v/peLkcPAJ2bHSfwg+q5R6A4NC8Kj1QQ6Xbxk00nkwh7fOG8xt1k1hojwX91 +h7E/9IqhGkIZCEHsw/mzerrUnetGeScCOdrIuJkXoSdSRx6XiF4ZyV53z4kGNVe7 +AkMZm6GOsqJIkuDBlAmcEd2uJNwTKNEeFYK7Wj+5NjMa1hOZ+FzwrBGAei97JYPT +2ns5NtO/3Ki/k1PaM8FsPYgQ/AlFNC8mtztmpJQzB6lQP7OTsYXD9n0/uyLlVknF +BOBuJIzBPLN1RIRpGgUYiXuAi1+5TSBRQ4G7NVjYCMisr6CuUBew31vgB4XG4iVL +591gXUo+2pcBckbaiZ5s+dVfhpb6vQImD+MiEiiT5Aw53o+OpHUCFeb1ICh9zPQg +SzreZ34Qu9hpvMdBBp6P +=8rwF +-----END PGP SIGNATURE----- diff --git a/sci-chemistry/bist/bist-0.5.1-r1.ebuild b/sci-chemistry/bist/bist-0.5.1-r1.ebuild new file mode 100644 index 000000000..2a31a618c --- /dev/null +++ b/sci-chemistry/bist/bist-0.5.1-r1.ebuild @@ -0,0 +1,30 @@ +# Copyright 1999-2010 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI="2" + +inherit eutils base + +DESCRIPTION="Bist, the chemical drawing tool" +HOMEPAGE="http://www.autistici.org/interzona/index.php?mod=03_Bist" +SRC_URI="http://www.autistici.org/interzona/ftrack.php?url=sections/06_Download/${P}.tar.gz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +RDEPEND="net-misc/curl + dev-libs/expat + >=x11-libs/fltk-1.1.7:1.1 + sci-libs/gsl + >=sci-chemistry/openbabel-2.2.0 + >=media-libs/plotutils-2.5" + +DEPEND="${RDEPEND}" + +src_prepare() { + use amd64 && epatch "${FILESDIR}/${P}-bracket.patch" + epatch "${FILESDIR}/${P}-install.patch" +} diff --git a/sci-chemistry/bist/files/bist-0.5.1-bracket.patch b/sci-chemistry/bist/files/bist-0.5.1-bracket.patch new file mode 100644 index 000000000..86a587e6a --- /dev/null +++ b/sci-chemistry/bist/files/bist-0.5.1-bracket.patch @@ -0,0 +1,11 @@ +--- pluginclude/wrap_bracket_dialog.hpp.orig 2008-09-30 10:45:56.000000000 +0200 ++++ pluginclude/wrap_bracket_dialog.hpp 2008-09-30 10:46:07.000000000 +0200 +@@ -10,7 +10,7 @@ + #if SIZEOF_INT_P == 8 + #define WRAP_BRACKET_SIZE_USER_DATA_MENU long int + #else +-#define WRAP_BRACKET_SIZE_USER_DATA_MENU unsigned int ++#define WRAP_BRACKET_SIZE_USER_DATA_MENU unsigned long + #endif + + diff --git a/sci-chemistry/bist/files/bist-0.5.1-install.patch b/sci-chemistry/bist/files/bist-0.5.1-install.patch new file mode 100644 index 000000000..b349b0d5b --- /dev/null +++ b/sci-chemistry/bist/files/bist-0.5.1-install.patch @@ -0,0 +1,80 @@ +diff -r -u bist-0.5.1.orig/Makefile.in bist-0.5.1/Makefile.in +--- bist-0.5.1.orig/Makefile.in 2009-04-04 12:04:44.000000000 +0200 ++++ bist-0.5.1/Makefile.in 2009-09-23 23:59:37.000000000 +0200 +@@ -16,12 +16,7 @@ + + SRC_DIR =./src/ + INC_DIR=./include/ +-LIB_DIR=@LIB_DIR_CONFIG_PATH@ +-LIB_DIR_DEBIAN=@LIB_DIR_CONFIG@ +- +-ifneq ($(strip ${exec_prefix}),) +-LIB_DIR=${LIB_DIR_DEBIAN} +-endif ++LIB_DIR=@libdir@ + + + +@@ -186,33 +181,29 @@ + rm -f *.o + rm -f plugin/*.so + install: +- install -D -o root -g root -m 0755 -s $(ELF) $(prefix)/bin/$(ELF) +- install -D -o root -g root -m 0644 bist.png $(prefix)/share/pixmap/bist.png +- install -D -o root -g root -m 0644 bist.desktop $(prefix)/share/applications/bist.desktop ++ install -D -o root -g root -m 0755 -s $(ELF) $(DESTDIR)/$(prefix)/bin/$(ELF) ++ install -D -o root -g root -m 0644 bist.png $(DESTDIR)/$(prefix)/share/pixmaps/bist.png ++ install -D -o root -g root -m 0644 bist.desktop $(DESTDIR)/$(prefix)/share/applications/bist.desktop + find rings -type d -exec install -D -o root \ +- -g root -m 0755 -d $(prefix)/share/$(ELF)-$(VERSION)/\{\} \; ++ -g root -m 0755 -d $(DESTDIR)/$(prefix)/share/$(ELF)-$(VERSION)/\{\} \; + find rings ! -type d -exec install -D -o root -g root \ +- -m 0644 \{\} $(prefix)/share/$(ELF)-$(VERSION)/\{\} \; +- install -D -o root -g root -m 0755 -d $(prefix)/share/doc/$(ELF)-$(VERSION) +- install -D -o root -g root -m 0644 doc/*.* $(prefix)/share/doc/$(ELF)-$(VERSION)/ +- install -D -o root -g root -m 0644 TODO $(prefix)/share/doc/$(ELF)-$(VERSION)/ +- install -D -o root -g root -m 0644 BUGS $(prefix)/share/doc/$(ELF)-$(VERSION)/ +- install -D -o root -g root -m 0644 README $(prefix)/share/doc/$(ELF)-$(VERSION)/ +- ./mkinstalldirs $(LIB_DIR)/$(ELF)-$(VERSION)/plugin +- install -D -o root -g root -m 0644 plugin/*.so $(LIB_DIR)/$(ELF)-$(VERSION)/plugin/ +- ./mkinstalldirs $(prefix)/share/locale/$(ELF)-$(VERSION) +- cp -R po/* $(prefix)/share/locale/$(ELF)-$(VERSION)/ +- ./mkinstalldirs $(prefix)/share/man/man1/ ++ -m 0644 \{\} $(DESTDIR)/$(prefix)/share/$(ELF)-$(VERSION)/\{\} \; ++ install -D -o root -g root -m 0755 -d $(DESTDIR)/$(prefix)/share/doc/$(ELF)-$(VERSION) ++ install -D -o root -g root -m 0644 doc/*.* $(DESTDIR)/$(prefix)/share/doc/$(ELF)-$(VERSION)/ ++ install -D -o root -g root -m 0644 TODO $(DESTDIR)/$(prefix)/share/doc/$(ELF)-$(VERSION)/ ++ install -D -o root -g root -m 0644 BUGS $(DESTDIR)/$(prefix)/share/doc/$(ELF)-$(VERSION)/ ++ install -D -o root -g root -m 0644 README $(DESTDIR)/$(prefix)/share/doc/$(ELF)-$(VERSION)/ ++ ./mkinstalldirs $(DESTDIR)/$(LIB_DIR)/$(ELF)-$(VERSION)/plugin ++ install -D -o root -g root -m 0644 plugin/*.so $(DESTDIR)/$(LIB_DIR)/$(ELF)-$(VERSION)/plugin/ ++ ./mkinstalldirs $(DESTDIR)/$(prefix)/share/locale ++ find po -name "*.po" -exec rm -v \{\} \; ++ rm -v po/LINGUAS po/bist.pot ++ cp -R po/* $(DESTDIR)/$(prefix)/share/locale/ ++ ./mkinstalldirs $(DESTDIR)/$(prefix)/share/man/man1/ + gzip -c --best ./doc/man/$(ELF).1 > ./doc/man/$(ELF).1.gz +- install -D -o root -g root -m 0644 ./doc/man/$(ELF).1.gz $(prefix)/share/man/man1/ ++ install -D -o root -g root -m 0644 ./doc/man/$(ELF).1.gz $(DESTDIR)/$(prefix)/share/man/man1/ + rm -f ./doc/man/$(ELF).1.gz + +-uninstall: +- rm -Rf $(prefix)/bin/$(ELF)-$(VERSION) +- rm -Rf $(prefix)/share/$(ELF)-$(VERSION) +- rm -Rf $(prefix)/share/doc/$(ELF)-$(VERSION) +- rm -Rf $(LIB_DIR)/$(ELF)-$(VERSION)/ +- rm -f $(prefix)/share/man/man1/$(ELF).1.gz + dist: distclean + ./rmcvs.py + cd .. ; tar -c $(ELF) | gzip --best > $(TARNAME)-$(VERSION).tar.gz +diff -r -u bist-0.5.1.orig/include/config_path.h.in bist-0.5.1/include/config_path.h.in +--- bist-0.5.1.orig/include/config_path.h.in 2009-04-04 12:04:42.000000000 +0200 ++++ bist-0.5.1/include/config_path.h.in 2009-09-23 23:29:35.000000000 +0200 +@@ -12,6 +12,6 @@ + #define VERSION "@VERSION@" + + #define PLUGIN_PATH_HOME "/.bist/plugin/" +-#define PLUGIN_PATH_SHARED "@LIB_DIR_CONFIG_PATH@/@ELF@-@VERSION@/plugin/" ++#define PLUGIN_PATH_SHARED "@libdir@/@ELF@-@VERSION@/plugin/" + + #define ELF_ABS_PATH "@prefix@/bin/@ELF@" diff --git a/sci-chemistry/bist/metadata.xml b/sci-chemistry/bist/metadata.xml new file mode 100644 index 000000000..d6a2d376f --- /dev/null +++ b/sci-chemistry/bist/metadata.xml @@ -0,0 +1,13 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci</herd> +<maintainer><email>maintainer-wanted@gentoo.org</email></maintainer> +<longdescription> +Bist stands for bidimensional structures (in italian it sounds like "beast" in english ) and is a chemical drawing tool. It is focused on organic chemistry but it may be useful also for chemists or teacher as well. +Bist support many of the formalism used to describe molecoles structures like single bond, double bond, stereospecific bond, charges, resonance arrows, lone pairs etc... +It can export both postscript and png formats. +This version is now integrated with openbabel API so virtually all the formats this library can accept should be a valid input for bist too. +Currently portability is not my goal so only GNU/Linux platform is supported. However any effort in this direction is appreciated so feel free to ask me about any porting question. Please remember that bist is actually in a beta stage of development so i strongly suggest you to not using it except for testing or hacking purpose. Bist is free software released under GNU GPL version 3 +</longdescription> +</pkgmetadata> |