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-rw-r--r--sci-chemistry/gromacs/ChangeLog4
-rw-r--r--sci-chemistry/gromacs/Manifest12
-rw-r--r--sci-chemistry/gromacs/gromacs-4.0.9999.ebuild4
-rw-r--r--sci-chemistry/gromacs/gromacs-9999.ebuild4
4 files changed, 14 insertions, 10 deletions
diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/ChangeLog
index df2837949..8c014c748 100644
--- a/sci-chemistry/gromacs/ChangeLog
+++ b/sci-chemistry/gromacs/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 08 Jul 2010; Christoph Junghans <kleiner_otti@gmx.de>
+ gromacs-4.0.9999.ebuild, gromacs-9999.ebuild:
+ fix for bug #301854
+
04 Jul 2010; Christoph Junghans <kleiner_otti@gmx.de>
gromacs-4.0.9999.ebuild, -files/gromacs-4.0.9999-ccache.patch,
-files/gromacs-4.0.9999-configure-gfortran.patch, gromacs-9999.ebuild:
diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest
index 9cfb151c5..c6938e41d 100644
--- a/sci-chemistry/gromacs/Manifest
+++ b/sci-chemistry/gromacs/Manifest
@@ -5,14 +5,14 @@ AUX gromacs-4.0.9999-docdir.patch 1352 RMD160 336ab23b4b65430caf3205650a8787e8e3
DIST ffamber_v4.0-doc.tar.gz 7915520 RMD160 aeadb18bd88bcd9e6fc45af22af15c51e32c66a3 SHA1 8d4969fa7eec660b41f769874be9698980b49ed0 SHA256 0b3395570dfe9bf808a297fcb120e1f525f38a91791fbafe6e444d542d7754aa
DIST gmxtest-4.0.4.tgz 14845017 RMD160 c7c583415438bdef4c9996da9064254e9460cf16 SHA1 998179aa2bfbc4f80514f10ed774762f85c854c3 SHA256 6a7f787f4bb7cbecb688115ff0854a5ffd2ef33487d7bce4b031e63848b6f361
DIST manual-4.0.pdf 2135100 RMD160 b963642f8e1433f11328c3d0c4b1645c9de506da SHA1 8ae951ee15b2a7dc626331fce36511bc8766144c SHA256 646f810477eee2d710de6019c52056550413d0ba77baf9680195c835ddafe80a
-EBUILD gromacs-4.0.9999.ebuild 9775 RMD160 187846ca6f4229464c3a645565ee0da713989c43 SHA1 431d4530eeb40c8ffeaed877fc1e280ed5e5a1bd SHA256 eb18957efa06404dcb0cfea0b9ee53ba1b9d18094caf39a6e76600849e0ca5d0
-EBUILD gromacs-9999.ebuild 9191 RMD160 8e0614ff83d7f13d056b3b5f19c86bc19535e26f SHA1 f4928b01cc7a71a5b230b8076f2314a001da66bb SHA256 0d0dc2ed6996ec94353b2ce8b170621206e46888f9b9c925f1978c7ceb1bc69b
-MISC ChangeLog 4581 RMD160 5de19b5b4aeeeac7f0b844b504a5bc62e6352e89 SHA1 6557568b661bd93f1b02cb0a3e7692d6d5ea5bac SHA256 b1cfbc47856ab3b028e043432da246ecab13529495ed5aa831619683f20bc38a
+EBUILD gromacs-4.0.9999.ebuild 9773 RMD160 5796e28f2e23c071bcf2458e557900aecc37eb4d SHA1 91dc1f13b1f24d2818103854787d66153afc27fb SHA256 fe65baaa974ef973dcaee4b6bc730649cf7916454ff45eb3e92adba51248989f
+EBUILD gromacs-9999.ebuild 9189 RMD160 3554047dee89ef9a03cbaac26cdc2da731486389 SHA1 d83030a2388a8a504575aeb2df7badd0bf987b83 SHA256 afd52b4714c54be3f4a1590571c7a75d8c2fb73a77699670e810d463e0dcedff
+MISC ChangeLog 4708 RMD160 05d5b601a1ce4a36ab6598dbb0b8bedfe1d45d09 SHA1 14d82482d57c391794b7b5972d960c0d967aa33a SHA256 a85e3d0e3153536d85a3a1a9754c12dfe55bb732b287cef7afdb3c61b07d00df
MISC metadata.xml 643 RMD160 e9ffc42d792f15f3d4438a0de225277ec4814041 SHA1 c83fd4a32d896b7a2586667bc684d46f9daf8693 SHA256 177885ec674e8630a9c9451a0e0a35fc83615b39b387a67002e27f1b0d6b19b2
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-iEYEARECAAYFAkww8GcACgkQy0OE/ans1/m6JwCfcItAhw0uqiD98Aq2YYHBR6dS
-Rt4An2Gm/oWmeGMBkZRujWQ/jlsk4ezE
-=dK5g
+iEYEARECAAYFAkw2NtAACgkQy0OE/ans1/klmQCfeMGSD7x+yMLc0X5lmMKQI2i/
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diff --git a/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild b/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild
index f61c8eedf..24514483c 100644
--- a/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild
+++ b/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild
@@ -230,10 +230,10 @@ src_test() {
src_install() {
for x in ${GMX_DIRS}; do
cd "${S}-${x}"
- emake DESTDIR="${ED}" install || die "emake install for ${x} failed"
+ emake DESTDIR="${D}" install || die "emake install for ${x} failed"
use mpi || continue
cd "${S}-${x}_mpi"
- emake DESTDIR="${ED}" install-mdrun || die "emake install-mdrun for ${x} failed"
+ emake DESTDIR="${D}" install-mdrun || die "emake install-mdrun for ${x} failed"
done
sed -n -e '/^GMXBIN/,/^GMXDATA/p' "${ED}"/usr/bin/GMXRC.bash > "${T}/80gromacs"
diff --git a/sci-chemistry/gromacs/gromacs-9999.ebuild b/sci-chemistry/gromacs/gromacs-9999.ebuild
index b54f1998b..3a4fc186a 100644
--- a/sci-chemistry/gromacs/gromacs-9999.ebuild
+++ b/sci-chemistry/gromacs/gromacs-9999.ebuild
@@ -209,10 +209,10 @@ src_test() {
src_install() {
for x in ${GMX_DIRS}; do
cd "${S}-${x}"
- emake DESTDIR="${ED}" install || die "emake install for ${x} failed"
+ emake DESTDIR="${D}" install || die "emake install for ${x} failed"
use mpi || continue
cd "${S}-${x}_mpi"
- emake DESTDIR="${ED}" install-mdrun || die "emake install-mdrun for ${x} failed"
+ emake DESTDIR="${D}" install-mdrun || die "emake install-mdrun for ${x} failed"
done
sed -n -e '/^GMXBIN/,/^GMXDATA/p' "${ED}"/usr/bin/GMXRC.bash > "${T}/80gromacs"