diff options
830 files changed, 6711 insertions, 6712 deletions
diff --git a/app-admin/eselect/metadata.xml b/app-admin/eselect/metadata.xml index d3c30b4c1..8c8d15633 100644 --- a/app-admin/eselect/metadata.xml +++ b/app-admin/eselect/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bicatali@gentoo.org</email> - </maintainer> + <maintainer type="person"> + <email>bicatali@gentoo.org</email> + </maintainer> </pkgmetadata> diff --git a/app-benchmarks/btl/metadata.xml b/app-benchmarks/btl/metadata.xml index 0e64e0503..8ebdfe5fd 100644 --- a/app-benchmarks/btl/metadata.xml +++ b/app-benchmarks/btl/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>andyspiros@gmail.com</email> - <name>Andrea Arteaga</name> - <description>Bench Template Library</description> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>This package contains a modified copy of the BTL.</longdescription> - <upstream> - <remote-id type="bitbucket">spiros/btl</remote-id> - </upstream> + <maintainer type="person"> + <email>andyspiros@gmail.com</email> + <name>Andrea Arteaga</name> + <description>Bench Template Library</description> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>This package contains a modified copy of the BTL.</longdescription> + <upstream> + <remote-id type="bitbucket">spiros/btl</remote-id> + </upstream> </pkgmetadata> diff --git a/app-benchmarks/numbench/metadata.xml b/app-benchmarks/numbench/metadata.xml index 91ead3a68..9851d9f74 100644 --- a/app-benchmarks/numbench/metadata.xml +++ b/app-benchmarks/numbench/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>andyspiros@gmail.com</email> - <name>Andrea Arteaga</name> - <description>Google Summer of Code 2011 student</description> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>This package contains a set of scripts developed during the Google Summer of Code 2011 project. It aims to benchmark numerical libraries, and more precisely implementations of the standard BLAS, CBLAS, LAPACK, PBLAS, ScaLAPACK and the library FFTW.</longdescription> - <upstream> - <remote-id type="github">andyspiros/numbench</remote-id> - </upstream> + <maintainer type="person"> + <email>andyspiros@gmail.com</email> + <name>Andrea Arteaga</name> + <description>Google Summer of Code 2011 student</description> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>This package contains a set of scripts developed during the Google Summer of Code 2011 project. It aims to benchmark numerical libraries, and more precisely implementations of the standard BLAS, CBLAS, LAPACK, PBLAS, ScaLAPACK and the library FFTW.</longdescription> + <upstream> + <remote-id type="github">andyspiros/numbench</remote-id> + </upstream> </pkgmetadata> diff --git a/app-doc/blacs-docs/metadata.xml b/app-doc/blacs-docs/metadata.xml index 49201a4d4..b479760c1 100644 --- a/app-doc/blacs-docs/metadata.xml +++ b/app-doc/blacs-docs/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The BLACS (Basic Linear Algebra Communication Subprograms) project is an ongoing investigation whose purpose is to create a linear algebra oriented message passing interface that may be implemented diff --git a/app-doc/blas-docs/metadata.xml b/app-doc/blas-docs/metadata.xml index a7f7415dc..636c418b6 100644 --- a/app-doc/blas-docs/metadata.xml +++ b/app-doc/blas-docs/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines for most of the basic vector and matrix operations. They are widely used as the basis for other high quality linear algebra software, for diff --git a/app-doc/root-docs/metadata.xml b/app-doc/root-docs/metadata.xml index 27aa72d21..117b7b34c 100644 --- a/app-doc/root-docs/metadata.xml +++ b/app-doc/root-docs/metadata.xml @@ -1,22 +1,22 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bircoph@gentoo.org</email> - <name>Andrew Savchenko</name> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>bircoph@gentoo.org</email> + <name>Andrew Savchenko</name> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> This package contains the automatically generated ROOT class documentation. </longdescription> - <use> - <flag name="api">Generate html API documentation</flag> - <flag name="http">Build HttpServer documentation</flag> - <flag name="math">Provide all math related documentation</flag> - <flag name="metric">Default to A4 paper size and metric measurement. Letter will be used otherwise</flag> - </use> + <use> + <flag name="api">Generate html API documentation</flag> + <flag name="http">Build HttpServer documentation</flag> + <flag name="math">Provide all math related documentation</flag> + <flag name="metric">Default to A4 paper size and metric measurement. Letter will be used otherwise</flag> + </use> </pkgmetadata> diff --git a/app-forensics/vine/metadata.xml b/app-forensics/vine/metadata.xml index cabecde27..9dee8db11 100644 --- a/app-forensics/vine/metadata.xml +++ b/app-forensics/vine/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> </pkgmetadata> diff --git a/app-portage/g-octave/metadata.xml b/app-portage/g-octave/metadata.xml index d8ba483ee..0f04e0b21 100644 --- a/app-portage/g-octave/metadata.xml +++ b/app-portage/g-octave/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>rafael@rafaelmartins.eng.br</email> - <name>Rafael Goncalves Martins</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>rafael@rafaelmartins.eng.br</email> + <name>Rafael Goncalves Martins</name> + </maintainer> + <longdescription lang="en"> g-octave is a tool that generates and installs ebuilds for Octave-Forge packages "on-the-fly" to Gentoo Linux, using Portage. It's capable to generate ebuilds and Manifest files for the packages, and to install diff --git a/app-vim/vim-gromacs/metadata.xml b/app-vim/vim-gromacs/metadata.xml index 4a5c9ab9d..b0b58dd8d 100644 --- a/app-vim/vim-gromacs/metadata.xml +++ b/app-vim/vim-gromacs/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription lang="en"> VIM syntax plugin which provides syntax highlighting for the gromacs files. </longdescription> - <upstream> - <remote-id type="github">HubLot/vim-gromacs</remote-id> - </upstream> + <upstream> + <remote-id type="github">HubLot/vim-gromacs</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-cpp/eigen/metadata.xml b/dev-cpp/eigen/metadata.xml index 6d5cb6666..b4b6e1b4d 100644 --- a/dev-cpp/eigen/metadata.xml +++ b/dev-cpp/eigen/metadata.xml @@ -1,34 +1,34 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Eigen is a lightweight C++ template library for vector and matrix math, a.k.a. linear algebra. Unlike most other linear algebra libraries, Eigen focuses on the simple mathematical needs of applications: games and other OpenGL apps, spreadsheets and other office apps, etc. Eigen is dedicated to providing optimal speed with GCC. </longdescription> - <use> - <flag name="adolc"> + <use> + <flag name="adolc"> Enable automatic differentiation using <pkg>sci-libs/adolc</pkg> </flag> - <flag name="metis"> + <flag name="metis"> Enable matrix partitioning using <pkg>sci-libs/metis</pkg></flag> - <flag name="mkl"> + <flag name="mkl"> Use propertary intel blas/lapack implementation through <pkg>sci-libs/mkl</pkg> </flag> - <flag name="pastix"> + <flag name="pastix"> Enable large scale direct solver with using <pkg>sci-libs/pastix</pkg> </flag> - <flag name="sparse"> + <flag name="sparse"> Enable use for extra sparse matrix with <pkg>sci-libs/umfpack</pkg>, <pkg>sci-libs/cholmod</pkg>, <pkg>sci-libs/superlu</pkg> and <pkg>dev-cpp/sparsehash</pkg> </flag> - </use> - <upstream> - <remote-id type="bitbucket">eigen/eigen</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="bitbucket">eigen/eigen</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-cpp/growler-arch/metadata.xml b/dev-cpp/growler-arch/metadata.xml index 6ddf36355..56f547ec6 100644 --- a/dev-cpp/growler-arch/metadata.xml +++ b/dev-cpp/growler-arch/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription>Growler-Arch is the set growler libraries and utilities that provide a distributed object architecture and environment.</longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription>Growler-Arch is the set growler libraries and utilities that provide a distributed object architecture and environment.</longdescription> </pkgmetadata> diff --git a/dev-cpp/growler-core/metadata.xml b/dev-cpp/growler-core/metadata.xml index d3ff5e92a..b33ec1a13 100644 --- a/dev-cpp/growler-core/metadata.xml +++ b/dev-cpp/growler-core/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription> Growler-Core provides a large set of mainly general-purpose classes and functionality for developing and using the Growler Distributed Component Architecture. diff --git a/dev-cpp/growler-link/metadata.xml b/dev-cpp/growler-link/metadata.xml index b436d6bce..64aa8eb6a 100644 --- a/dev-cpp/growler-link/metadata.xml +++ b/dev-cpp/growler-link/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription> Growler-Link is the lowest-level Growler package. It provides basic support for dynamic linking, components and modules, as well as several other of Growler's commonly used API's, such as Clogger. diff --git a/dev-cpp/growler-math/metadata.xml b/dev-cpp/growler-math/metadata.xml index 4f4b88027..d284223c7 100644 --- a/dev-cpp/growler-math/metadata.xml +++ b/dev-cpp/growler-math/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription>Growler-Math provides a set of math-related classes and functionality</longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription>Growler-Math provides a set of math-related classes and functionality</longdescription> </pkgmetadata> diff --git a/dev-cpp/growler-thread/metadata.xml b/dev-cpp/growler-thread/metadata.xml index 13e10be3d..5800a84ea 100644 --- a/dev-cpp/growler-thread/metadata.xml +++ b/dev-cpp/growler-thread/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription> Growler-Thread is a pthread wrapper library used by Growler. It provides support for creating threads, and for common multithreading tasks </longdescription> diff --git a/dev-cpp/growler/metadata.xml b/dev-cpp/growler/metadata.xml index ebad0883d..7fd7dac50 100644 --- a/dev-cpp/growler/metadata.xml +++ b/dev-cpp/growler/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription>Growler is a C++-based distributed object and event architecture.</longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription>Growler is a C++-based distributed object and event architecture.</longdescription> </pkgmetadata> diff --git a/dev-cpp/icnc/metadata.xml b/dev-cpp/icnc/metadata.xml index 1b36049c6..9dee8db11 100644 --- a/dev-cpp/icnc/metadata.xml +++ b/dev-cpp/icnc/metadata.xml @@ -1,8 +1,8 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> </pkgmetadata> diff --git a/dev-java/fits/metadata.xml b/dev-java/fits/metadata.xml index aab84e6a7..0b1cc63ad 100644 --- a/dev-java/fits/metadata.xml +++ b/dev-java/fits/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Java library which provides I/O for FITS images and binary tables. The Java libraries support all basic FITS formats and gzip compressed files. Support for access to data subsets is included and the diff --git a/dev-java/flexdock/metadata.xml b/dev-java/flexdock/metadata.xml index f864524db..6d57dc37c 100644 --- a/dev-java/flexdock/metadata.xml +++ b/dev-java/flexdock/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Java docking framework for use in cross-platform Swing applications. </longdescription> </pkgmetadata> diff --git a/dev-java/gluegen/metadata.xml b/dev-java/gluegen/metadata.xml index fa1706ad0..df54bab01 100644 --- a/dev-java/gluegen/metadata.xml +++ b/dev-java/gluegen/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> GlueGen is a tool which automatically generates the Java and JNI code necessary to call C libraries. It reads as input ANSI C header files and separate configuration files which provide control over many aspects of the glue code @@ -16,7 +16,7 @@ on the IR before glue code emission. GlueGen is currently powerful enough to bind even low-level APIs such as the Java Native Interface (JNI) and the AWT Native Interface (JAWT) back up to the Java programming language. </longdescription> - <upstream> - <remote-id type="github">sgothel/gluegen</remote-id> - </upstream> + <upstream> + <remote-id type="github">sgothel/gluegen</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-java/hdf-java/metadata.xml b/dev-java/hdf-java/metadata.xml index 16cedf505..531e47258 100644 --- a/dev-java/hdf-java/metadata.xml +++ b/dev-java/hdf-java/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> HDF is a versatile data model that can represent very complex data objects and a wide variety of metadata. It is a completely portable file format with no limit on the number or size of data objects in @@ -13,8 +13,8 @@ This Java package implements HDF4/HDF5 data objects in an object-oriented form. It provides a common Java API for accessing HDF files. </longdescription> - <use> - <flag name="hdf">Add support for the Hierarchical Data Format v.4 (<pkg>sci-libs/hdf</pkg>)</flag> - <flag name="hdfview">Build a GUI viewer for all files supported in <pkg>dev-java/hdf-java</pkg></flag> - </use> + <use> + <flag name="hdf">Add support for the Hierarchical Data Format v.4 (<pkg>sci-libs/hdf</pkg>)</flag> + <flag name="hdfview">Build a GUI viewer for all files supported in <pkg>dev-java/hdf-java</pkg></flag> + </use> </pkgmetadata> diff --git a/dev-java/htsjdk/metadata.xml b/dev-java/htsjdk/metadata.xml index feb7e6155..e18a4898a 100644 --- a/dev-java/htsjdk/metadata.xml +++ b/dev-java/htsjdk/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-java/jeuclid-core/metadata.xml b/dev-java/jeuclid-core/metadata.xml index 5e72e0411..78b3a367d 100644 --- a/dev-java/jeuclid-core/metadata.xml +++ b/dev-java/jeuclid-core/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> JEuclid is a complete MathML rendering solution, consisting of: * A MathViewer application * Command line converters from MathML to other formats @@ -15,7 +15,7 @@ This package contains the basic JEuclid rendering and document handling classes. </longdescription> - <upstream> - <remote-id type="sourceforge">jeuclid</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">jeuclid</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-java/jgraphx/metadata.xml b/dev-java/jgraphx/metadata.xml index ffe33e8c0..49aa77f7c 100644 --- a/dev-java/jgraphx/metadata.xml +++ b/dev-java/jgraphx/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> JGraph X is based on the mxGraph architecture, a re-designed core based on JGraph experience. Overall, JGraph X provides more features that JGraph, with a far diff --git a/dev-java/jlatexmath-fop/metadata.xml b/dev-java/jlatexmath-fop/metadata.xml index a5ee94095..cc9ca869b 100644 --- a/dev-java/jlatexmath-fop/metadata.xml +++ b/dev-java/jlatexmath-fop/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> LaTeXmath library provides a set of Java classes for displaying (complex) mathematical formulas as part of a Java application with LateX style. This package installs the plugin for dev-java/fop. diff --git a/dev-java/jlatexmath/metadata.xml b/dev-java/jlatexmath/metadata.xml index e2085e4c5..62952f06f 100644 --- a/dev-java/jlatexmath/metadata.xml +++ b/dev-java/jlatexmath/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> LaTeXmath library provides a set of Java classes for displaying (complex) mathematical formulas as part of a Java application with LateX style. diff --git a/dev-java/jogl/metadata.xml b/dev-java/jogl/metadata.xml index 88a073443..7a5a6ccdd 100644 --- a/dev-java/jogl/metadata.xml +++ b/dev-java/jogl/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> JOGL provides Java with a Binding for the OpenGL® API (JSR-231), and is designed to provide hardware-supported 3D graphics to applications written in Java. </longdescription> - <use> - <flag name="cg">Enable NVidia Cg binding.</flag> - </use> - <upstream> - <remote-id type="github">sgothel/jogl</remote-id> - </upstream> + <use> + <flag name="cg">Enable NVidia Cg binding.</flag> + </use> + <upstream> + <remote-id type="github">sgothel/jogl</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-java/netcdf/metadata.xml b/dev-java/netcdf/metadata.xml index 540e5d70e..c49e4ad8f 100644 --- a/dev-java/netcdf/metadata.xml +++ b/dev-java/netcdf/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The NetCDF-Java Library is a Java interface to NetCDF files, as well as to many other types of scientific data formats. </longdescription> diff --git a/dev-lang/berkeley_upc/metadata.xml b/dev-lang/berkeley_upc/metadata.xml index 1ebc1d2a3..c4275da80 100644 --- a/dev-lang/berkeley_upc/metadata.xml +++ b/dev-lang/berkeley_upc/metadata.xml @@ -1,25 +1,25 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jauhien@gentoo.org</email> - <name>Jauhien Piatlicki</name> - </maintainer> - <use> - <flag name="mpi-compat">Enable interoperability with MPI</flag> - <flag name="pshm">Build UPC Runtime/GASNet with Process-SHared Memory enabled</flag> - <flag name="segment-fast"> + <maintainer type="person"> + <email>jauhien@gentoo.org</email> + <name>Jauhien Piatlicki</name> + </maintainer> + <use> + <flag name="mpi-compat">Enable interoperability with MPI</flag> + <flag name="pshm">Build UPC Runtime/GASNet with Process-SHared Memory enabled</flag> + <flag name="segment-fast"> Select GASNet's FAST segments (default), for the fastest remote access with a possible cost in max shared memory size </flag> - <flag name="segment-large"> + <flag name="segment-large"> Select GASNet's LARGE segments, for the largest possible shared memory size, at a possible cost in remote access time </flag> - <flag name="single">Support running over smp loopback (no network)</flag> - <flag name="sptr-packed">Use the more efficient 'packed' shared pointer representation</flag> - <flag name="sptr-struct">Use the 'struct' shared pointer representation</flag> - <flag name="sptr-symmetric">Enable 'symmetric' pointer variant where available (64-bit smp and shmem)</flag> - <flag name="udp">Support running over UDP</flag> - </use> + <flag name="single">Support running over smp loopback (no network)</flag> + <flag name="sptr-packed">Use the more efficient 'packed' shared pointer representation</flag> + <flag name="sptr-struct">Use the 'struct' shared pointer representation</flag> + <flag name="sptr-symmetric">Enable 'symmetric' pointer variant where available (64-bit smp and shmem)</flag> + <flag name="udp">Support running over UDP</flag> + </use> </pkgmetadata> diff --git a/dev-lang/berkeley_upc_translator/metadata.xml b/dev-lang/berkeley_upc_translator/metadata.xml index f7d539ea1..c8c5e0f03 100644 --- a/dev-lang/berkeley_upc_translator/metadata.xml +++ b/dev-lang/berkeley_upc_translator/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jauhien@gentoo.org</email> - <name>Jauhien Piatlicki</name> - </maintainer> + <maintainer type="person"> + <email>jauhien@gentoo.org</email> + <name>Jauhien Piatlicki</name> + </maintainer> </pkgmetadata> diff --git a/dev-lang/conceptual/metadata.xml b/dev-lang/conceptual/metadata.xml index 9766ecb5d..c73b3a9fa 100644 --- a/dev-lang/conceptual/metadata.xml +++ b/dev-lang/conceptual/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <use> - <flag name="gui">Build the Java base graphical interface</flag> - </use> - <upstream> - <remote-id type="sourceforge">conceptual</remote-id> - </upstream> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <use> + <flag name="gui">Build the Java base graphical interface</flag> + </use> + <upstream> + <remote-id type="sourceforge">conceptual</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-lang/icc/metadata.xml b/dev-lang/icc/metadata.xml index 4a2545b28..7731f2960 100644 --- a/dev-lang/icc/metadata.xml +++ b/dev-lang/icc/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Intel® C++ Compiler is a full featured C/C++ compiler for Intel based architectures. The compiler supports multi-threading, automatic processor dispatch, vectorization, auto-parallelization, OpenMP, data diff --git a/dev-lang/idb/metadata.xml b/dev-lang/idb/metadata.xml index af02a6866..8bb408f0d 100644 --- a/dev-lang/idb/metadata.xml +++ b/dev-lang/idb/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Intel® Debugger is a command line debugger for Intel based architectures. It is well suited with the Intel C++ or Intel FORTRAN compilers. It also comes also with a graphical interface and extensive @@ -15,7 +15,7 @@ well. License, terms of qualifications can be found on the web site and follow the one received in the Intel compilers. </longdescription> - <use> - <flag name="eclipse">Install the <pkg>dev-util/eclipse-sdk</pkg> plugins</flag> - </use> + <use> + <flag name="eclipse">Install the <pkg>dev-util/eclipse-sdk</pkg> plugins</flag> + </use> </pkgmetadata> diff --git a/dev-lang/ifc/metadata.xml b/dev-lang/ifc/metadata.xml index 2dcae58a6..a2754dff2 100644 --- a/dev-lang/ifc/metadata.xml +++ b/dev-lang/ifc/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Intel® Fortran Compiler is a full featured FORTRAN 77/95 and substantial FORTRAN 2003 compiler for Intel based architectures. The compiler supports multi-threading with automatic processor dispatch, diff --git a/dev-lang/path64/metadata.xml b/dev-lang/path64/metadata.xml index ee1012f9f..03dc1bf82 100644 --- a/dev-lang/path64/metadata.xml +++ b/dev-lang/path64/metadata.xml @@ -1,20 +1,20 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <longdescription> The PathScale EKOPath Compiler Suite offers programmers a rich set of tools and one of the world's most sophisticated optimization infrastructures to maximize program performance on any Intel 64 or AMD64 platform supporting Intel MMX, SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2, AMD SSE4A and AVX. </longdescription> - <use> - <flag name="debugger">Build PathDB debugger</flag> - <flag name="assembler">Build PathAS assembler</flag> - <flag name="native">Use EKOPath/Path64 for bootstraping</flag> - <flag name="valgrind">Support compiler debugging with <pkg>dev-util/valgrind</pkg></flag> - </use> + <use> + <flag name="debugger">Build PathDB debugger</flag> + <flag name="assembler">Build PathAS assembler</flag> + <flag name="native">Use EKOPath/Path64 for bootstraping</flag> + <flag name="valgrind">Support compiler debugging with <pkg>dev-util/valgrind</pkg></flag> + </use> </pkgmetadata> diff --git a/dev-lang/pgi/metadata.xml b/dev-lang/pgi/metadata.xml index 93c720670..785285df0 100644 --- a/dev-lang/pgi/metadata.xml +++ b/dev-lang/pgi/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> PGI is the C/C++/Fortran compiler suite of the Portland Group. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="java">Install a PGI-tuned JRE.</flag> - <flag name="cuda">Install PGI's CUDA components (e.g. for OpenACC)</flag> - </use> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="java">Install a PGI-tuned JRE.</flag> + <flag name="cuda">Install PGI's CUDA components (e.g. for OpenACC)</flag> + </use> </pkgmetadata> diff --git a/dev-lang/terra/metadata.xml b/dev-lang/terra/metadata.xml index 3b7daac27..684a4dc29 100644 --- a/dev-lang/terra/metadata.xml +++ b/dev-lang/terra/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <upstream> - <remote-id type="github">zdevito/terra</remote-id> - </upstream> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <upstream> + <remote-id type="github">zdevito/terra</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-lang/vtune/metadata.xml b/dev-lang/vtune/metadata.xml index 18adbb0c0..c46d15bb3 100644 --- a/dev-lang/vtune/metadata.xml +++ b/dev-lang/vtune/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>nbigaouette@gmail.com</email> - <name>Nicolas Bigaouette</name> - </maintainer> + <maintainer type="person"> + <email>nbigaouette@gmail.com</email> + <name>Nicolas Bigaouette</name> + </maintainer> </pkgmetadata> diff --git a/dev-lang/yaggo/metadata.xml b/dev-lang/yaggo/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-lang/yaggo/metadata.xml +++ b/dev-lang/yaggo/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-libs/asmjit/metadata.xml b/dev-libs/asmjit/metadata.xml index b86ea1dd8..be3086e71 100644 --- a/dev-libs/asmjit/metadata.xml +++ b/dev-libs/asmjit/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> AsmJit is complete x86/x64 JIT-Assembler for C++ language. It supports 32/64-bit x86 processors including all usable extensions (FPU, MMX, 3dNow, SSE, SSE2, SSE3 and SSE4) through type-safe API that mimics Intel diff --git a/dev-libs/boost-compute/metadata.xml b/dev-libs/boost-compute/metadata.xml index 50b082f43..23fa5aae7 100644 --- a/dev-libs/boost-compute/metadata.xml +++ b/dev-libs/boost-compute/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Boost.Compute is a GPU/parallel-computing library for C++ based on OpenCL. The core library is a thin C++ wrapper over the OpenCL API and provides access to compute devices, contexts, command queues and memory buffers. </longdescription> - <upstream> - <remote-id type="github">boostorg/compute</remote-id> - </upstream> + <upstream> + <remote-id type="github">boostorg/compute</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/fortrancl/metadata.xml b/dev-libs/fortrancl/metadata.xml index b46223cbe..1543d123c 100644 --- a/dev-libs/fortrancl/metadata.xml +++ b/dev-libs/fortrancl/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> FortranCL is an OpenCL interface for Fortran 90. It allows programmers to call the OpenCL parallel programming framework directly from Fortran, so developers can accelerate their Fortran code using graphical processing units (GPU) and diff --git a/dev-libs/intel-common/metadata.xml b/dev-libs/intel-common/metadata.xml index f880bd7d1..ed553916d 100644 --- a/dev-libs/intel-common/metadata.xml +++ b/dev-libs/intel-common/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> This package contains the core files to be installed for the Intel compilers and libraries. Probably useless if installed standalone. </longdescription> - <use> - <flag name="compiler">Install the libraries needed for the icc and ifort compilers</flag> - <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag> - </use> + <use> + <flag name="compiler">Install the libraries needed for the icc and ifort compilers</flag> + <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag> + </use> </pkgmetadata> diff --git a/dev-libs/libconfig/metadata.xml b/dev-libs/libconfig/metadata.xml index 8b29a8e5d..910ab564a 100644 --- a/dev-libs/libconfig/metadata.xml +++ b/dev-libs/libconfig/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Libconfig is a simple library for processing structured configuration files. Libconfig is very compact — a fraction of the size of the expat XML parser library. This makes it well-suited for memory-constrained systems like handheld devices. diff --git a/dev-libs/libcuda/metadata.xml b/dev-libs/libcuda/metadata.xml index 137a77828..1bee8dd17 100644 --- a/dev-libs/libcuda/metadata.xml +++ b/dev-libs/libcuda/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <upstream> - <remote-id type="github">shinpei0208/gdev</remote-id> - </upstream> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <upstream> + <remote-id type="github">shinpei0208/gdev</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/libflatarray/metadata.xml b/dev-libs/libflatarray/metadata.xml index 994e032f1..e130eb4d7 100644 --- a/dev-libs/libflatarray/metadata.xml +++ b/dev-libs/libflatarray/metadata.xml @@ -1,22 +1,22 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> LibGeoDecomp is a multi-dimensional C++ array class which provides an object-oriented view (a.k.a. array of structs, AoS) while internally storing data in a struct of arrays (SoA) manner. It comes with utilities to move data to CUDA enabled GPUs. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="cuda"> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="cuda"> Enables plugins for NVIDIA GPUs (e.g. CUDAAllocator) </flag> - </use> + </use> </pkgmetadata> diff --git a/dev-libs/libgdev/metadata.xml b/dev-libs/libgdev/metadata.xml index 137a77828..1bee8dd17 100644 --- a/dev-libs/libgdev/metadata.xml +++ b/dev-libs/libgdev/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <upstream> - <remote-id type="github">shinpei0208/gdev</remote-id> - </upstream> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <upstream> + <remote-id type="github">shinpei0208/gdev</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/mxml/metadata.xml b/dev-libs/mxml/metadata.xml index e769ed6a9..91b1cf5d1 100644 --- a/dev-libs/mxml/metadata.xml +++ b/dev-libs/mxml/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="person"> - <email>cjk34@cam.ac.uk</email> - <name>Chris Kerr</name> - <description>I don't develop this software, I'm just a Gentoo user who + <maintainer type="person"> + <email>cjk34@cam.ac.uk</email> + <name>Chris Kerr</name> + <description>I don't develop this software, I'm just a Gentoo user who wanted to install it</description> -</maintainer> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription>Mini-XML is a lightweight, ultra-portable XML library + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>Mini-XML is a lightweight, ultra-portable XML library that requires only an ANSI C compiler and a 'make' program.</longdescription> -<use/> + <use/> </pkgmetadata> diff --git a/dev-libs/opencl-clhpp/metadata.xml b/dev-libs/opencl-clhpp/metadata.xml index 5ef422065..eb09296ba 100644 --- a/dev-libs/opencl-clhpp/metadata.xml +++ b/dev-libs/opencl-clhpp/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">KhronosGroup/OpenCL-CLHPP</remote-id> - </upstream> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">KhronosGroup/OpenCL-CLHPP</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/simclist/metadata.xml b/dev-libs/simclist/metadata.xml index bbcd467aa..e795139c5 100644 --- a/dev-libs/simclist/metadata.xml +++ b/dev-libs/simclist/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> SimCList is a high quality C (C++ embeddable) library for handling lists. It exploits several advanced techniques for improving performance, including freelists, sentinels, automatic sort algorithm diff --git a/dev-libs/utf8proc/metadata.xml b/dev-libs/utf8proc/metadata.xml index bea4b0d50..c6efd7d5b 100644 --- a/dev-libs/utf8proc/metadata.xml +++ b/dev-libs/utf8proc/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> utf8proc is a library for processing UTF-8 encoded Unicode strings. Some features are Unicode normalization, stripping of default ignorable characters, case folding and detection of grapheme @@ -14,7 +14,7 @@ (U+2212) and “Hyphen-Minus” (U+002D, ASCII Minus) all into the ASCII minus sign, to make them equal for comparisons. </longdescription> - <upstream> - <remote-id type="github">JuliaLang/utf8proc</remote-id> - </upstream> + <upstream> + <remote-id type="github">JuliaLang/utf8proc</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-ml/lacaml/metadata.xml b/dev-ml/lacaml/metadata.xml index d11df4158..e3d0b1f12 100644 --- a/dev-ml/lacaml/metadata.xml +++ b/dev-ml/lacaml/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> BLAS/LAPACK-interface for OCaml </longdescription> - <upstream> - <remote-id type="bitbucket">mmottl/lacaml</remote-id> - </upstream> + <upstream> + <remote-id type="bitbucket">mmottl/lacaml</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-ml/mlgmpidl/metadata.xml b/dev-ml/mlgmpidl/metadata.xml index 0c2629449..02da151ce 100644 --- a/dev-ml/mlgmpidl/metadata.xml +++ b/dev-ml/mlgmpidl/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> MLGMPIDL is a package offering an interface to the GMP and MPFR libraries for OCaml version 3.07 or higher. The interface offers access to almost all the functions of the library, and is decomposed into 7 submodules. </longdescription> - <use> - <flag name="mpfr">Add support for <pkg>dev-libs/mpfr</pkg></flag> - </use> + <use> + <flag name="mpfr">Add support for <pkg>dev-libs/mpfr</pkg></flag> + </use> </pkgmetadata> diff --git a/dev-perl/Algorithm-Loops/metadata.xml b/dev-perl/Algorithm-Loops/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Algorithm-Loops/metadata.xml +++ b/dev-perl/Algorithm-Loops/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/BTLib/metadata.xml b/dev-perl/BTLib/metadata.xml index aa38b1c12..f872d82fd 100644 --- a/dev-perl/BTLib/metadata.xml +++ b/dev-perl/BTLib/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-perl/Bio-BigFile/metadata.xml b/dev-perl/Bio-BigFile/metadata.xml index 1d67411d5..138cb7705 100644 --- a/dev-perl/Bio-BigFile/metadata.xml +++ b/dev-perl/Bio-BigFile/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/dev-perl/Bio-DB-Das-Chado/metadata.xml b/dev-perl/Bio-DB-Das-Chado/metadata.xml index 1d67411d5..138cb7705 100644 --- a/dev-perl/Bio-DB-Das-Chado/metadata.xml +++ b/dev-perl/Bio-DB-Das-Chado/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/dev-perl/Bio-DB-HTS/metadata.xml b/dev-perl/Bio-DB-HTS/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Bio-DB-HTS/metadata.xml +++ b/dev-perl/Bio-DB-HTS/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Bio-EnsEMBL/metadata.xml b/dev-perl/Bio-EnsEMBL/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Bio-EnsEMBL/metadata.xml +++ b/dev-perl/Bio-EnsEMBL/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Config-Std/metadata.xml b/dev-perl/Config-Std/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Config-Std/metadata.xml +++ b/dev-perl/Config-Std/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/DBIx-DBStag/metadata.xml b/dev-perl/DBIx-DBStag/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/DBIx-DBStag/metadata.xml +++ b/dev-perl/DBIx-DBStag/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Data-Types/metadata.xml b/dev-perl/Data-Types/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Data-Types/metadata.xml +++ b/dev-perl/Data-Types/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Lab-VISA/metadata.xml b/dev-perl/Lab-VISA/metadata.xml index d7298d70a..90bb64f30 100644 --- a/dev-perl/Lab-VISA/metadata.xml +++ b/dev-perl/Lab-VISA/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mail@akhuettel.de</email> - </maintainer> + <maintainer type="person"> + <email>mail@akhuettel.de</email> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Log-Cabin/metadata.xml b/dev-perl/Log-Cabin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/Log-Cabin/metadata.xml +++ b/dev-perl/Log-Cabin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Scalar-Util-Numeric/metadata.xml b/dev-perl/Scalar-Util-Numeric/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Scalar-Util-Numeric/metadata.xml +++ b/dev-perl/Scalar-Util-Numeric/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Set-IntSpan-Fast/metadata.xml b/dev-perl/Set-IntSpan-Fast/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Set-IntSpan-Fast/metadata.xml +++ b/dev-perl/Set-IntSpan-Fast/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Text-Graph/metadata.xml b/dev-perl/Text-Graph/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Text-Graph/metadata.xml +++ b/dev-perl/Text-Graph/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Text-ParseWords/metadata.xml b/dev-perl/Text-ParseWords/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/Text-ParseWords/metadata.xml +++ b/dev-perl/Text-ParseWords/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Text-RecordParser/metadata.xml b/dev-perl/Text-RecordParser/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Text-RecordParser/metadata.xml +++ b/dev-perl/Text-RecordParser/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Time-Progress/metadata.xml b/dev-perl/Time-Progress/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/Time-Progress/metadata.xml +++ b/dev-perl/Time-Progress/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/go-db-perl/metadata.xml b/dev-perl/go-db-perl/metadata.xml index 959160fe4..8417d1580 100644 --- a/dev-perl/go-db-perl/metadata.xml +++ b/dev-perl/go-db-perl/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/go-perl/metadata.xml b/dev-perl/go-perl/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/go-perl/metadata.xml +++ b/dev-perl/go-perl/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/opal-client/metadata.xml b/dev-perl/opal-client/metadata.xml index 1cfc2883a..f475ca517 100644 --- a/dev-perl/opal-client/metadata.xml +++ b/dev-perl/opal-client/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">opaltoolkit</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">opaltoolkit</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/Forthon/metadata.xml b/dev-python/Forthon/metadata.xml index 989e06282..d97c22737 100644 --- a/dev-python/Forthon/metadata.xml +++ b/dev-python/Forthon/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> -<longdescription> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <longdescription> Forthon generates links between Fortran95 and Python. Python is a high level, object oriented, interactive and scripting language that allows a flexible and versatile interface to computational tools. The Forthon diff --git a/dev-python/GOGrapher/metadata.xml b/dev-python/GOGrapher/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-python/GOGrapher/metadata.xml +++ b/dev-python/GOGrapher/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/PeakUtils/metadata.xml b/dev-python/PeakUtils/metadata.xml index 32d3251d5..059847126 100644 --- a/dev-python/PeakUtils/metadata.xml +++ b/dev-python/PeakUtils/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> As the name implies, this package provides utilities related to the detection of peaks on 1D data. Includes functions to perform baseline estimation, to find the indexes of the peaks in the data and performing Gaussian fitting or centroid computation to further increase the resolution of the peak detection. </longdescription> - <upstream> - <remote-id type="bitbucket">lucashnegri/peakutils</remote-id> - <remote-id type="pypi">PeakUtils</remote-id> - </upstream> + <upstream> + <remote-id type="bitbucket">lucashnegri/peakutils</remote-id> + <remote-id type="pypi">PeakUtils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/PyVISA-py/metadata.xml b/dev-python/PyVISA-py/metadata.xml index 26acc9198..6128d226c 100644 --- a/dev-python/PyVISA-py/metadata.xml +++ b/dev-python/PyVISA-py/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A PyVISA backend that implements a large part of the "Virtual Instrument Software Architecture" (VISA) in pure Python. </longdescription> - <upstream> - <remote-id type="github">hgrecco/pyvisa-py</remote-id> - <remote-id type="pypi">PyVISA-py</remote-id> - </upstream> + <upstream> + <remote-id type="github">hgrecco/pyvisa-py</remote-id> + <remote-id type="pypi">PyVISA-py</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/PyVISA/metadata.xml b/dev-python/PyVISA/metadata.xml index 19e1a51ca..555e1ea28 100644 --- a/dev-python/PyVISA/metadata.xml +++ b/dev-python/PyVISA/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Python package for support of the "Virtual Instrument Software Architecture" (VISA), in order to control measurement devices and test equipment via GPIB, RS232, Ethernet or USB. </longdescription> - <upstream> - <remote-id type="github">hgrecco/pyvisa-py</remote-id> - <remote-id type="pypi">PyVISA</remote-id> - </upstream> + <upstream> + <remote-id type="github">hgrecco/pyvisa-py</remote-id> + <remote-id type="pypi">PyVISA</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/RecSQL/metadata.xml b/dev-python/RecSQL/metadata.xml index 355e9a516..a3daeebd2 100644 --- a/dev-python/RecSQL/metadata.xml +++ b/dev-python/RecSQL/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/arrayfire-python/metadata.xml b/dev-python/arrayfire-python/metadata.xml index 12f0d0584..c8d772966 100644 --- a/dev-python/arrayfire-python/metadata.xml +++ b/dev-python/arrayfire-python/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> ArrayFire is a high performance library for parallel computing wih an easy-to-use API. This package project Python bindings for the ArrayFire library. </longdescription> - <upstream> - <remote-id type="github">arrayfire/arrayfire-python</remote-id> - <remote-id type="pypi">arrayfire</remote-id> - </upstream> + <upstream> + <remote-id type="github">arrayfire/arrayfire-python</remote-id> + <remote-id type="pypi">arrayfire</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/astropy-helpers/metadata.xml b/dev-python/astropy-helpers/metadata.xml index 68d40928a..fec8db663 100644 --- a/dev-python/astropy-helpers/metadata.xml +++ b/dev-python/astropy-helpers/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> astropy-helpers is a collection of build tools used by astropy that may be used by other projects. </longdescription> - <upstream> - <remote-id type="github">astropy/astropy-helpers</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/astropy-helpers</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/astropy/metadata.xml b/dev-python/astropy/metadata.xml index eddb62a26..3d1dc456d 100644 --- a/dev-python/astropy/metadata.xml +++ b/dev-python/astropy/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/astropysics/metadata.xml b/dev-python/astropysics/metadata.xml index 1472408f0..0ea741042 100644 --- a/dev-python/astropysics/metadata.xml +++ b/dev-python/astropysics/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Astropysics leverages a variety of tools already developed for python to simplify quick-and-dirty calculations and streamline really hard ones. When paired with an interactive environment, it aims to be a full-featured replacement for IDL diff --git a/dev-python/astroquery/metadata.xml b/dev-python/astroquery/metadata.xml index 84e169547..2d17f54cd 100644 --- a/dev-python/astroquery/metadata.xml +++ b/dev-python/astroquery/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Astroquery is a package containing a collection of tools to use online astronomical databases. It integrates with Astropy and aims to support many services with a uniform API. </longdescription> - <upstream> - <remote-id type="github">astropy/astroquery</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/astroquery</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/bcbio-gff/metadata.xml b/dev-python/bcbio-gff/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/bcbio-gff/metadata.xml +++ b/dev-python/bcbio-gff/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/brewer2mpl/metadata.xml b/dev-python/brewer2mpl/metadata.xml index 42211a68b..e2e66a3e6 100644 --- a/dev-python/brewer2mpl/metadata.xml +++ b/dev-python/brewer2mpl/metadata.xml @@ -1,22 +1,22 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> brewer2mpl is a pure Python package for accessing colorbrewer2.org color maps from Python. With brewer2mpl you can get the raw RGB colors of all 165 colorbrewer2.org color maps. The color map data ships with brewer2mpl so no internet connection is required. </longdescription> - <upstream> - <remote-id type="github">jiffyclub/brewer2mpl</remote-id> - <remote-id type="pypi">brewer2mpl</remote-id> - </upstream> + <upstream> + <remote-id type="github">jiffyclub/brewer2mpl</remote-id> + <remote-id type="pypi">brewer2mpl</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/busfactor/metadata.xml b/dev-python/busfactor/metadata.xml index edbc63649..ddd09607c 100644 --- a/dev-python/busfactor/metadata.xml +++ b/dev-python/busfactor/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-python/ccdproc/metadata.xml b/dev-python/ccdproc/metadata.xml index e634ec8d8..47d993d8e 100644 --- a/dev-python/ccdproc/metadata.xml +++ b/dev-python/ccdproc/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> ccdproc is a AstroPy-affliated package for the basic reduction of CCD images. It provides a framework for accounting for error propagation and bad pixel tracking through the reduction steps. </longdescription> - <upstream> - <remote-id type="github">astropy/ccdproc</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/ccdproc</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/coards/metadata.xml b/dev-python/coards/metadata.xml index 77d8a36e7..95bd08e32 100644 --- a/dev-python/coards/metadata.xml +++ b/dev-python/coards/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <longdescription lang="en"> This module converts between a given COARDS time specification and a Python datetime object, which is much more useful. </longdescription> - <upstream> - <remote-id type="pypi">coards</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">coards</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/coords/metadata.xml b/dev-python/coords/metadata.xml index 94198d2ea..3e5eb239e 100644 --- a/dev-python/coords/metadata.xml +++ b/dev-python/coords/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> coords is a part of Astrolib and provide a set of routines for managing astronomical coordinate systems </longdescription> diff --git a/dev-python/cosmocalc/metadata.xml b/dev-python/cosmocalc/metadata.xml index 3563cede1..fa2ced1cd 100644 --- a/dev-python/cosmocalc/metadata.xml +++ b/dev-python/cosmocalc/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Calculate useful values for a given cosmology. This module uses code adapted from CC.py (James Schombert) which is a Python version of the Cosmology Calculator (Ned Wright). diff --git a/dev-python/dijitso/metadata.xml b/dev-python/dijitso/metadata.xml index cb17acf08..0b22fbbcd 100644 --- a/dev-python/dijitso/metadata.xml +++ b/dev-python/dijitso/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/dimensionful/metadata.xml b/dev-python/dimensionful/metadata.xml index c156f9144..cd6735682 100644 --- a/dev-python/dimensionful/metadata.xml +++ b/dev-python/dimensionful/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <upstream> - <remote-id type="github">caseywstark/dimensionful</remote-id> - </upstream> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <upstream> + <remote-id type="github">caseywstark/dimensionful</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ffc/metadata.xml b/dev-python/ffc/metadata.xml index 35bb1f59e..bf5f22263 100644 --- a/dev-python/ffc/metadata.xml +++ b/dev-python/ffc/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/ffnet/metadata.xml b/dev-python/ffnet/metadata.xml index 84e07f038..7bcbdf69d 100644 --- a/dev-python/ffnet/metadata.xml +++ b/dev-python/ffnet/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> ffnet is a fast and easy-to-use feed-forward neural network training library for python. </longdescription> - <use> - <flag name="matplotlib">Use matplotlib for drawing</flag> - </use> - <upstream> - <remote-id type="pypi">ffnet</remote-id> - <remote-id type="sourceforge">ffnet</remote-id> - </upstream> + <use> + <flag name="matplotlib">Use matplotlib for drawing</flag> + </use> + <upstream> + <remote-id type="pypi">ffnet</remote-id> + <remote-id type="sourceforge">ffnet</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ffnetui/metadata.xml b/dev-python/ffnetui/metadata.xml index fe996f826..f55ef05e1 100644 --- a/dev-python/ffnetui/metadata.xml +++ b/dev-python/ffnetui/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> GUI for ffnet - feed forward neural network for python </longdescription> - <upstream> - <remote-id type="pypi">ffnetui</remote-id> - <remote-id type="sourceforge">ffnet</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">ffnetui</remote-id> + <remote-id type="sourceforge">ffnet</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/fiat/metadata.xml b/dev-python/fiat/metadata.xml index c3aad9140..67ce0c487 100644 --- a/dev-python/fiat/metadata.xml +++ b/dev-python/fiat/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/gammapy/metadata.xml b/dev-python/gammapy/metadata.xml index 9ab0a8d12..d691d33fe 100644 --- a/dev-python/gammapy/metadata.xml +++ b/dev-python/gammapy/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Gammapy is a package for simulating and analysing gamma-ray sky data. It is currently designed to support users of telescopes such as Fermi, H.E.S.S, and CTA in primarily Galactic plane survey studies. </longdescription> - <upstream> - <remote-id type="github">gammapy/gammapy</remote-id> - </upstream> + <upstream> + <remote-id type="github">gammapy/gammapy</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/gitana/metadata.xml b/dev-python/gitana/metadata.xml index 221a98348..65ccba066 100644 --- a/dev-python/gitana/metadata.xml +++ b/dev-python/gitana/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-python/hdf5storage/metadata.xml b/dev-python/hdf5storage/metadata.xml index 8ce73fe8c..73ae4ea5c 100644 --- a/dev-python/hdf5storage/metadata.xml +++ b/dev-python/hdf5storage/metadata.xml @@ -1,23 +1,23 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> This Python package provides high level utilities to read/write a variety of Python types to/from HDF5 (Heirarchal Data Format) formatted files. This package also provides support for MATLAB MAT v7.3 formatted files, which are just HDF5 files with a different extension and some extra meta-data. </longdescription> - <upstream> - <remote-id type="github">frejanordsiek/hdf5storage</remote-id> - <remote-id type="pypi">hdf5storage</remote-id> - </upstream> + <upstream> + <remote-id type="github">frejanordsiek/hdf5storage</remote-id> + <remote-id type="pypi">hdf5storage</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/imageutils/metadata.xml b/dev-python/imageutils/metadata.xml index 8f422b20a..95065b351 100644 --- a/dev-python/imageutils/metadata.xml +++ b/dev-python/imageutils/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> imageutils is a collection of image processing utilities that are generally useful to astronomers. These will likely become part of the core AstroPy package before the 1.0 release. </longdescription> - <upstream> - <remote-id type="github">astropy/imageutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/imageutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/inference/metadata.xml b/dev-python/inference/metadata.xml index f93f34858..528a07501 100644 --- a/dev-python/inference/metadata.xml +++ b/dev-python/inference/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The inference package is a collection of Python modules implementing a variety of methods targeting the statistical inference problems—and the statistical modeling style—of the physical diff --git a/dev-python/instant/metadata.xml b/dev-python/instant/metadata.xml index 0aa8827a4..8da29b3a0 100644 --- a/dev-python/instant/metadata.xml +++ b/dev-python/instant/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/ipykernel/metadata.xml b/dev-python/ipykernel/metadata.xml index d87bc07db..a938c561c 100644 --- a/dev-python/ipykernel/metadata.xml +++ b/dev-python/ipykernel/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> This package provides the IPython kernel for Jupyter. </longdescription> - <upstream> - <remote-id type="github">ipython/ipykernel</remote-id> - </upstream> + <upstream> + <remote-id type="github">ipython/ipykernel</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ipyparallel/metadata.xml b/dev-python/ipyparallel/metadata.xml index bd6c5c2e0..d636b5640 100644 --- a/dev-python/ipyparallel/metadata.xml +++ b/dev-python/ipyparallel/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Interactive Parallel Computing with IPython. ipyparallel is the new home of IPython.parallel. </longdescription> diff --git a/dev-python/ipython_genutils/metadata.xml b/dev-python/ipython_genutils/metadata.xml index 52164c08d..92090add1 100644 --- a/dev-python/ipython_genutils/metadata.xml +++ b/dev-python/ipython_genutils/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> This package contains some common utilities shared by Jupyter and IPython projects during The Big Split. As soon as possible, those packages will remove their dependency on this, and this repo will go away. No packages outside IPython/Jupyter should depend on it. </longdescription> - <upstream> - <remote-id type="github">ipython/ipython_genutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">ipython/ipython_genutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ipywidgets/metadata.xml b/dev-python/ipywidgets/metadata.xml index 4495ebb74..7c5fbee17 100644 --- a/dev-python/ipywidgets/metadata.xml +++ b/dev-python/ipywidgets/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Interactive HTML widgets for Jupyter notebooks and the IPython kernel. </longdescription> - <upstream> - <remote-id type="pypi">ipywidgets</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">ipywidgets</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/jupyter_client/metadata.xml b/dev-python/jupyter_client/metadata.xml index fbd1af5b5..e7ee52515 100644 --- a/dev-python/jupyter_client/metadata.xml +++ b/dev-python/jupyter_client/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Contains the reference implementation of the Jupyter protocol. It also provides client and kernel management APIs for working with kernels. It also provides the jupyter kernelspec entrypoint for diff --git a/dev-python/jupyter_console/metadata.xml b/dev-python/jupyter_console/metadata.xml index a2b19aeaf..553beaef0 100644 --- a/dev-python/jupyter_console/metadata.xml +++ b/dev-python/jupyter_console/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A terminal-based console frontend for Jupyter kernels. This code is based on the single-process IPython terminal. </longdescription> diff --git a/dev-python/jupyter_core/metadata.xml b/dev-python/jupyter_core/metadata.xml index 88e71aa2c..af36b0845 100644 --- a/dev-python/jupyter_core/metadata.xml +++ b/dev-python/jupyter_core/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Core common functionality of Jupyter projects. This package contains base application classes and configuration inhertited by other projects. It doesn't do much on its own. diff --git a/dev-python/matlab_wrapper/metadata.xml b/dev-python/matlab_wrapper/metadata.xml index 38df0353a..fc0385f4f 100644 --- a/dev-python/matlab_wrapper/metadata.xml +++ b/dev-python/matlab_wrapper/metadata.xml @@ -1,23 +1,23 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> matlab_wrapper allows you to use MATLAB in a convenient way in Python. You can call MATLAB functions and access workspace variables directly from your Python scripts and interactive shell. MATLAB session is started in the background and appears as a regular Python module. </longdescription> - <upstream> - <remote-id type="github">mrkrd/matlab_wrapper</remote-id> - <remote-id type="pypi">matlab_wrapper</remote-id> - </upstream> + <upstream> + <remote-id type="github">mrkrd/matlab_wrapper</remote-id> + <remote-id type="pypi">matlab_wrapper</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/matplotlib-venn/metadata.xml b/dev-python/matplotlib-venn/metadata.xml index cae4c83f9..6c79256de 100644 --- a/dev-python/matplotlib-venn/metadata.xml +++ b/dev-python/matplotlib-venn/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">matplotlib-venn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">matplotlib-venn</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/matplotlib2tikz/metadata.xml b/dev-python/matplotlib2tikz/metadata.xml index 9dc28cbe0..7e9013abe 100644 --- a/dev-python/matplotlib2tikz/metadata.xml +++ b/dev-python/matplotlib2tikz/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-python/matrix2latex/metadata.xml b/dev-python/matrix2latex/metadata.xml index e8cce6c4b..c84a3bc91 100644 --- a/dev-python/matrix2latex/metadata.xml +++ b/dev-python/matrix2latex/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/meshpy/metadata.xml b/dev-python/meshpy/metadata.xml index 18f3e3730..250f08d0e 100644 --- a/dev-python/meshpy/metadata.xml +++ b/dev-python/meshpy/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> MeshPy offers quality triangular and tetrahedral mesh generation for Python. Meshes of this type are chiefly used in finite-element simulation codes, but also have many other applications ranging from computer graphics to robotics. @@ -13,7 +13,7 @@ In order to generate these 2D and 3D meshes, MeshPy provides Python interfaces to two well-regarded mesh generators, Triangle by J. Shewchuk and TetGen by Hang Si. Both are included in the package in slightly modified versions. </longdescription> - <upstream> - <remote-id type="pypi">MeshPy</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">MeshPy</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/metakernel/metadata.xml b/dev-python/metakernel/metadata.xml index e0c68c929..15370beff 100644 --- a/dev-python/metakernel/metadata.xml +++ b/dev-python/metakernel/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Jupyter/IPython kernel template which includes core magic functions (including help, command and file path completion, parallel and distributed processing, downloads, and much more). </longdescription> - <upstream> - <remote-id type="github">Calysto/metakernel</remote-id> - <remote-id type="pypi">metakernel</remote-id> - </upstream> + <upstream> + <remote-id type="github">Calysto/metakernel</remote-id> + <remote-id type="pypi">metakernel</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/metakernel_bash/metadata.xml b/dev-python/metakernel_bash/metadata.xml index 286d590e3..932dab97a 100644 --- a/dev-python/metakernel_bash/metadata.xml +++ b/dev-python/metakernel_bash/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Bash kernel for Jupyter/IPython, based on MetaKernel. </longdescription> - <upstream> - <remote-id type="github">Calysto/metakernel</remote-id> - <remote-id type="pypi">metakernel_bash</remote-id> - </upstream> + <upstream> + <remote-id type="github">Calysto/metakernel</remote-id> + <remote-id type="pypi">metakernel_bash</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/metakernel_python/metadata.xml b/dev-python/metakernel_python/metadata.xml index aaf6cb9d7..6a1c69057 100644 --- a/dev-python/metakernel_python/metadata.xml +++ b/dev-python/metakernel_python/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Python kernel for Jupyter/IPython, based on MetaKernel. </longdescription> - <upstream> - <remote-id type="github">Calysto/metakernel</remote-id> - <remote-id type="pypi">metakernel_python</remote-id> - </upstream> + <upstream> + <remote-id type="github">Calysto/metakernel</remote-id> + <remote-id type="pypi">metakernel_python</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/nbconvert/metadata.xml b/dev-python/nbconvert/metadata.xml index d9cbf5baa..e26b3e53a 100644 --- a/dev-python/nbconvert/metadata.xml +++ b/dev-python/nbconvert/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Jupyter NBConvert converts Jupyter notebooks to various other formats via Jinja templates. </longdescription> diff --git a/dev-python/nbdime/metadata.xml b/dev-python/nbdime/metadata.xml index 5a8712352..b57da319a 100644 --- a/dev-python/nbdime/metadata.xml +++ b/dev-python/nbdime/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> nbdime provides tools for diffing and merging of Jupyter Notebooks. </longdescription> - <use> - <flag name="webtools"> + <use> + <flag name="webtools"> Install web-based diff and merge tools. </flag> - </use> + </use> </pkgmetadata> diff --git a/dev-python/nbformat/metadata.xml b/dev-python/nbformat/metadata.xml index 4788ba53f..d58b06385 100644 --- a/dev-python/nbformat/metadata.xml +++ b/dev-python/nbformat/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Jupyther nbformat contains the reference implementation of the Jupyter Notebook format, and Python APIs for working with notebooks. There is also a JSON schema for notebook format diff --git a/dev-python/nbviewer/metadata.xml b/dev-python/nbviewer/metadata.xml index 3b58897ca..fed1faba7 100644 --- a/dev-python/nbviewer/metadata.xml +++ b/dev-python/nbviewer/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Jupyter nbviewer is the web application behind The Jupyter Notebook Viewer, which is graciously hosted by Rackspace. Run this locally to get most of the features of nbviewer on your own network. diff --git a/dev-python/newrelic/metadata.xml b/dev-python/newrelic/metadata.xml index 4a7c9adc5..c6f6fe8d4 100644 --- a/dev-python/newrelic/metadata.xml +++ b/dev-python/newrelic/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Python agent for the New Relic web application performance monitoring service. </longdescription> - <upstream> - <remote-id type="pypi">newrelic</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">newrelic</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ngslib/metadata.xml b/dev-python/ngslib/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/ngslib/metadata.xml +++ b/dev-python/ngslib/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/notebook/metadata.xml b/dev-python/notebook/metadata.xml index 8161170dc..36a119d62 100644 --- a/dev-python/notebook/metadata.xml +++ b/dev-python/notebook/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> The Jupyter HTML notebook is a web-based notebook environment for interactive computing. </longdescription> - <upstream> - <remote-id type="pypi">notebook</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">notebook</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/omniorbpy/metadata.xml b/dev-python/omniorbpy/metadata.xml index d47182280..39a7f8b65 100644 --- a/dev-python/omniorbpy/metadata.xml +++ b/dev-python/omniorbpy/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">omniorb</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">omniorb</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/opal-client/metadata.xml b/dev-python/opal-client/metadata.xml index 7aac60648..bd5beea0b 100644 --- a/dev-python/opal-client/metadata.xml +++ b/dev-python/opal-client/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">opaltoolkit</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">opaltoolkit</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pamela/metadata.xml b/dev-python/pamela/metadata.xml index e55257c75..879389634 100644 --- a/dev-python/pamela/metadata.xml +++ b/dev-python/pamela/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> An interface to the Pluggable Authentication Modules (PAM) library, written in pure Python (using ctypes). </longdescription> - <upstream> - <remote-id type="github">minrk/pamela</remote-id> - <remote-id type="pypi">pamela</remote-id> - </upstream> + <upstream> + <remote-id type="github">minrk/pamela</remote-id> + <remote-id type="pypi">pamela</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/photutils/metadata.xml b/dev-python/photutils/metadata.xml index 00ee2183b..d98fc6b24 100644 --- a/dev-python/photutils/metadata.xml +++ b/dev-python/photutils/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> photutils is a python package for determining photometric properties of sources in astronomical images. This includes source detection, centroid and shape parameters, and performing photometry. </longdescription> - <upstream> - <remote-id type="github">astropy/photutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/photutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pickleshare/metadata.xml b/dev-python/pickleshare/metadata.xml index 967d08889..ae14e7372 100644 --- a/dev-python/pickleshare/metadata.xml +++ b/dev-python/pickleshare/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike shelve, many processes can access the database simultaneously. Changing a value in database is immediately visible @@ -14,7 +14,7 @@ files. Hence the "database" is a directory where all files are governed by PickleShare. </longdescription> - <upstream> - <remote-id type="github">pickleshare/pickleshare</remote-id> - </upstream> + <upstream> + <remote-id type="github">pickleshare/pickleshare</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/prettyplotlib/metadata.xml b/dev-python/prettyplotlib/metadata.xml index 615f1b6db..a1a656ec9 100644 --- a/dev-python/prettyplotlib/metadata.xml +++ b/dev-python/prettyplotlib/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <longdescription> Python matplotlib-enhancer library which painlessly creates beautiful default matplotlib plots. </longdescription> - <upstream> - <remote-id type="pypi">prettyplotlib</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">prettyplotlib</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/prov/metadata.xml b/dev-python/prov/metadata.xml index 1b4b150fb..fc3d9fabb 100644 --- a/dev-python/prov/metadata.xml +++ b/dev-python/prov/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> A library for W3C Provenance Data Model supporting PROV-JSON and PROV-XML import/export </longdescription> - <upstream> - <remote-id type="pypi">prov</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">prov</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/psubprocess/metadata.xml b/dev-python/psubprocess/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-python/psubprocess/metadata.xml +++ b/dev-python/psubprocess/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/ptyprocess/metadata.xml b/dev-python/ptyprocess/metadata.xml index ea8694355..33094cdb7 100644 --- a/dev-python/ptyprocess/metadata.xml +++ b/dev-python/ptyprocess/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">pexpect/ptyprocess</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">pexpect/ptyprocess</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/py2bit/metadata.xml b/dev-python/py2bit/metadata.xml index 71d7d5a6a..4f1030617 100644 --- a/dev-python/py2bit/metadata.xml +++ b/dev-python/py2bit/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">dpryan79/py2bit</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">dpryan79/py2bit</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyBigWig/metadata.xml b/dev-python/pyBigWig/metadata.xml index 764884a58..c4302e542 100644 --- a/dev-python/pyBigWig/metadata.xml +++ b/dev-python/pyBigWig/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">dpryan79/pyBigWig</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">dpryan79/pyBigWig</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pydotplus/metadata.xml b/dev-python/pydotplus/metadata.xml index eb80ef0cd..e20862b8a 100644 --- a/dev-python/pydotplus/metadata.xml +++ b/dev-python/pydotplus/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> PyDotPlus is an improved version of the old pydot project that provides a Python Interface to Graphviz’s Dot language. </longdescription> - <upstream> - <remote-id type="pypi">pydotplus</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydotplus</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyfftw/metadata.xml b/dev-python/pyfftw/metadata.xml index 174e4dbdc..bc5ec1bc7 100644 --- a/dev-python/pyfftw/metadata.xml +++ b/dev-python/pyfftw/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A pythonic wrapper around FFTW, the FFT library, presenting a unified interface for all the supported transforms. </longdescription> - <upstream> - <remote-id type="pypi">pyFFTW</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pyFFTW</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyhdf/metadata.xml b/dev-python/pyhdf/metadata.xml index d38ca85ff..6a3e3ff5d 100644 --- a/dev-python/pyhdf/metadata.xml +++ b/dev-python/pyhdf/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>gorkypl@gmail.com</email> - <name>Paweł Rumian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="szip">Allow to use <pkg>sci-libs/szip</pkg> for SZIP compression method in SDsetcompress()</flag> - </use> - <upstream> - <remote-id type="sourceforge">pysclint</remote-id> - </upstream> + <maintainer type="person"> + <email>gorkypl@gmail.com</email> + <name>Paweł Rumian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="szip">Allow to use <pkg>sci-libs/szip</pkg> for SZIP compression method in SDsetcompress()</flag> + </use> + <upstream> + <remote-id type="sourceforge">pysclint</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pylibconfig2/metadata.xml b/dev-python/pylibconfig2/metadata.xml index e260b7fe1..78f60d79f 100644 --- a/dev-python/pylibconfig2/metadata.xml +++ b/dev-python/pylibconfig2/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Pure python library for libconfig syntax. IO works via strings, and include directives. @@ -18,8 +18,8 @@ ConfList, ConfGroup, respectively. A config is setup from a string only, and represented as a string automatically. </longdescription> - <upstream> - <remote-id type="github">heinzK1X/pylibconfig2</remote-id> - <remote-id type="pypi">pylibconfig2</remote-id> - </upstream> + <upstream> + <remote-id type="github">heinzK1X/pylibconfig2</remote-id> + <remote-id type="pypi">pylibconfig2</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pynomo/metadata.xml b/dev-python/pynomo/metadata.xml index f365ddf66..6e70e7086 100644 --- a/dev-python/pynomo/metadata.xml +++ b/dev-python/pynomo/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>witold.pilat@gmail.com</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>witold.pilat@gmail.com</email> + </maintainer> + <longdescription> Pynomo is a program to create (pdf) nomographs (nomograms) using Python interpreter. A nomograph (nomogram) is a graphical solution to an equation. </longdescription> - <upstream> - <remote-id type="sourceforge">pynomo</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">pynomo</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pysolar/metadata.xml b/dev-python/pysolar/metadata.xml index fe8be1b12..6e7d0ab03 100644 --- a/dev-python/pysolar/metadata.xml +++ b/dev-python/pysolar/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Pysolar is a collection of Python libraries for simulating the irradiation of any point on earth by the sun. It includes code for extremely precise ephemeris calculations, and more. Pysolar can calculate the location of the sun or the shading percentage as a function of time for a row of 2-axis tracked panels. </longdescription> - <upstream> - <remote-id type="github">pingswept/pysolar</remote-id> - </upstream> + <upstream> + <remote-id type="github">pingswept/pysolar</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/python-ivi/metadata.xml b/dev-python/python-ivi/metadata.xml index 630240a1d..1944d07dc 100644 --- a/dev-python/python-ivi/metadata.xml +++ b/dev-python/python-ivi/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Python IVI is a Python-based interpretation of the Interchangeable Virtual Instrument standard from the IVI foundation. Python IVI can use Python VXI-11, Python USBTMC, PyVISA, pySerial and linux-gpib to connect to instruments. </longdescription> - <upstream> - <remote-id type="github">python-ivi/python-ivi</remote-id> - </upstream> + <upstream> + <remote-id type="github">python-ivi/python-ivi</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/python-vxi11/metadata.xml b/dev-python/python-vxi11/metadata.xml index 72510adc7..49ec289af 100644 --- a/dev-python/python-vxi11/metadata.xml +++ b/dev-python/python-vxi11/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Python VXI-11 is a Python implementation of the VXI-11 Ethernet instrument control protocol. It is compatible with VXI-11, LXI instruments and VXI-11 to GPIB bridges (HP E2050A, etc.). </longdescription> - <upstream> - <remote-id type="github">python-ivi/python-vxi11</remote-id> - </upstream> + <upstream> + <remote-id type="github">python-ivi/python-vxi11</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pythoncgns/metadata.xml b/dev-python/pythoncgns/metadata.xml index 35f35f0b7..ba0b86026 100644 --- a/dev-python/pythoncgns/metadata.xml +++ b/dev-python/pythoncgns/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">CGNS</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">CGNS</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pythonqt/metadata.xml b/dev-python/pythonqt/metadata.xml index 364efbdc3..59cf1334d 100644 --- a/dev-python/pythonqt/metadata.xml +++ b/dev-python/pythonqt/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">pythonqt</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">pythonqt</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyvcf/metadata.xml b/dev-python/pyvcf/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/pyvcf/metadata.xml +++ b/dev-python/pyvcf/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/qtconsole/metadata.xml b/dev-python/qtconsole/metadata.xml index 93199c605..49db3eb90 100644 --- a/dev-python/qtconsole/metadata.xml +++ b/dev-python/qtconsole/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A rich Qt-based console for working with Jupyter kernels, supporting rich media output, session export, and more. </longdescription> diff --git a/dev-python/shove/metadata.xml b/dev-python/shove/metadata.xml index a5faa4b26..597a68368 100644 --- a/dev-python/shove/metadata.xml +++ b/dev-python/shove/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">lcrees/shove</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">lcrees/shove</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml index a21e3edfd..cff648bf6 100644 --- a/dev-python/snakemake/metadata.xml +++ b/dev-python/snakemake/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>python@gentoo.org</email> - <name>Python</name> - </maintainer> - <upstream> - <remote-id type="bitbucket">johanneskoester/snakemake</remote-id> - <remote-id type="pypi">snakemake</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>python@gentoo.org</email> + <name>Python</name> + </maintainer> + <upstream> + <remote-id type="bitbucket">johanneskoester/snakemake</remote-id> + <remote-id type="pypi">snakemake</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/specutils/metadata.xml b/dev-python/specutils/metadata.xml index 6e70cb363..bbb7bb9f3 100644 --- a/dev-python/specutils/metadata.xml +++ b/dev-python/specutils/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> specutils is a package to implement utilities and data structures to analyse astronomical spectra within python. It extends NDData from Astropy into a class with special handling of 1D spectra. </longdescription> - <upstream> - <remote-id type="github">astropy/specutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/specutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/symengine/metadata.xml b/dev-python/symengine/metadata.xml index ffc78518d..e8f764b63 100644 --- a/dev-python/symengine/metadata.xml +++ b/dev-python/symengine/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <upstream> - <remote-id type="github">sympy/symengine.py</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <upstream> + <remote-id type="github">sympy/symengine.py</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/testpath/metadata.xml b/dev-python/testpath/metadata.xml index 7183f762d..2d4f93498 100644 --- a/dev-python/testpath/metadata.xml +++ b/dev-python/testpath/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Testpath is a collection of utilities for Python code working with files and commands. It contains functions to check things on the filesystem, and tools for mocking system commands and recording diff --git a/dev-python/traitlets/metadata.xml b/dev-python/traitlets/metadata.xml index a1cab5d48..cad83b0c6 100644 --- a/dev-python/traitlets/metadata.xml +++ b/dev-python/traitlets/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A lightweight pure-Python derivative of Enthought Traits, used for configuring Python objects. This package powers the config system of IPython and Jupyter. </longdescription> - <upstream> - <remote-id type="github">ipython/traitlets</remote-id> - </upstream> + <upstream> + <remote-id type="github">ipython/traitlets</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ufl/metadata.xml b/dev-python/ufl/metadata.xml index 480a531aa..649442138 100644 --- a/dev-python/ufl/metadata.xml +++ b/dev-python/ufl/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/viper/metadata.xml b/dev-python/viper/metadata.xml index 18c1efff5..430a78511 100644 --- a/dev-python/viper/metadata.xml +++ b/dev-python/viper/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/widgetsnbextension/metadata.xml b/dev-python/widgetsnbextension/metadata.xml index 56daebe56..a594f2891 100644 --- a/dev-python/widgetsnbextension/metadata.xml +++ b/dev-python/widgetsnbextension/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Interactive HTML widgets for Jupyter notebooks. </longdescription> - <upstream> - <remote-id type="pypi">widgetsnbextension</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">widgetsnbextension</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/xopen/metadata.xml b/dev-python/xopen/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/xopen/metadata.xml +++ b/dev-python/xopen/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-tcltk/img_rotate/metadata.xml b/dev-tcltk/img_rotate/metadata.xml index 2cb3f2bf3..f1310b451 100644 --- a/dev-tcltk/img_rotate/metadata.xml +++ b/dev-tcltk/img_rotate/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-tcltk/togl/metadata.xml b/dev-tcltk/togl/metadata.xml index 9499d8d89..c191e6dbe 100644 --- a/dev-tcltk/togl/metadata.xml +++ b/dev-tcltk/togl/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">togl</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">togl</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-tex/pythontex/metadata.xml b/dev-tex/pythontex/metadata.xml index dc4de7cb4..02c7c504c 100644 --- a/dev-tex/pythontex/metadata.xml +++ b/dev-tex/pythontex/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="highlighting">PLEASE FIX MY DESCRIPTION</flag> - </use> - <upstream> - <remote-id type="github">gpoore/pythontex</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="highlighting">PLEASE FIX MY DESCRIPTION</flag> + </use> + <upstream> + <remote-id type="github">gpoore/pythontex</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-util/VampirTrace/metadata.xml b/dev-util/VampirTrace/metadata.xml index 925a26dfa..30bd07139 100644 --- a/dev-util/VampirTrace/metadata.xml +++ b/dev-util/VampirTrace/metadata.xml @@ -1,19 +1,19 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> VampirTrace is an open source library that allows detailed logging of program execution for parallel applications using message passing (MPI) and threads (OpenMP), Pthreads). Besides these typical parallelization paradigms, VampirTrace is capable of tracing GPU accelerated applications and generates exact time stamps for all GPU related events. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="cuda"> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="cuda"> Enable tracing of CUDA calls and GPU kernels. </flag> - </use> + </use> </pkgmetadata> diff --git a/dev-util/amdapp/metadata.xml b/dev-util/amdapp/metadata.xml index c26897c19..4557d6be7 100644 --- a/dev-util/amdapp/metadata.xml +++ b/dev-util/amdapp/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> AMD Accelerated Parallel Processing (APP) is an SDK which includes the Bolt libraries and an OpenCL implementation for AMD's CPUs and GPUs. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="examples">Build the OpenCL example programs</flag> - </use> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="examples">Build the OpenCL example programs</flag> + </use> </pkgmetadata> diff --git a/dev-util/emscripten-fastcomp/metadata.xml b/dev-util/emscripten-fastcomp/metadata.xml index ee38ab80a..89b91870f 100644 --- a/dev-util/emscripten-fastcomp/metadata.xml +++ b/dev-util/emscripten-fastcomp/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-util/emscripten/metadata.xml b/dev-util/emscripten/metadata.xml index bbd406949..b2ee118ca 100644 --- a/dev-util/emscripten/metadata.xml +++ b/dev-util/emscripten/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-util/mad-numdiff/metadata.xml b/dev-util/mad-numdiff/metadata.xml index 729575510..327c383a6 100644 --- a/dev-util/mad-numdiff/metadata.xml +++ b/dev-util/mad-numdiff/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>junghans@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <upstream> - <remote-id type="github">quinoacomputing/ndiff</remote-id> - </upstream> + <maintainer type="person"> + <email>junghans@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <upstream> + <remote-id type="github">quinoacomputing/ndiff</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-util/ndiff/metadata.xml b/dev-util/ndiff/metadata.xml index cf0cf4a0a..27bcacd8e 100644 --- a/dev-util/ndiff/metadata.xml +++ b/dev-util/ndiff/metadata.xml @@ -5,7 +5,7 @@ <email>AstroFloyd@gmail.com</email> <name>AstroFloyd</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci@gentoo.org</email> <name>Gentoo Science Project</name> </maintainer> diff --git a/dev-util/nvidia-cuda-gdk/metadata.xml b/dev-util/nvidia-cuda-gdk/metadata.xml index 089f3983a..36d95e29b 100644 --- a/dev-util/nvidia-cuda-gdk/metadata.xml +++ b/dev-util/nvidia-cuda-gdk/metadata.xml @@ -1,24 +1,24 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> The GPU Deployment Kit (previously known as the Tesla Deployment Kit) is a set of tools provided for the NVIDIA Tesla™, GRID™ and Quadro™ GPUs. </longdescription> - <use> - <flag name="healthmon">Install nvidia-healthmon.</flag> - <flag name="nvml">Install the NVIDIA Managment Library.</flag> - <flag name="nvvs"> + <use> + <flag name="healthmon">Install nvidia-healthmon.</flag> + <flag name="nvml">Install the NVIDIA Managment Library.</flag> + <flag name="nvvs"> Install the NVIDIA Validation Suite. </flag> - </use> + </use> </pkgmetadata> diff --git a/media-gfx/PhiloGL/metadata.xml b/media-gfx/PhiloGL/metadata.xml index 06dd1e4b1..c62a87f48 100644 --- a/media-gfx/PhiloGL/metadata.xml +++ b/media-gfx/PhiloGL/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> </pkgmetadata> diff --git a/media-gfx/brlcad/metadata.xml b/media-gfx/brlcad/metadata.xml index a5755a70a..efdd0d778 100644 --- a/media-gfx/brlcad/metadata.xml +++ b/media-gfx/brlcad/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>dongxuli2011@gmail.com</email> - <description>please assign bugs</description> - </maintainer> - <maintainer type="person"> - <email>dilfridge@gentoo.org</email> - <description>proxy-maintainer, please cc on bugs</description> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>dongxuli2011@gmail.com</email> + <description>please assign bugs</description> + </maintainer> + <maintainer type="person"> + <email>dilfridge@gentoo.org</email> + <description>proxy-maintainer, please cc on bugs</description> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> BRL-CAD is a Combinatorial/Constructive Solid Geometry (CSG) solid modeling system that includes an interactive geometry editor, ray-tracing support for rendering and geometric analysis, @@ -29,12 +29,12 @@ Geometry (NMG) data structures for surface-based solid models and photon mapping. </longdescription> - <use> - <flag name="benchmarks"> + <use> + <flag name="benchmarks"> Run benchmarks during test phase (need test option enabled) </flag> - </use> - <upstream> - <remote-id type="sourceforge">brlcad</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="sourceforge">brlcad</remote-id> + </upstream> </pkgmetadata> diff --git a/media-gfx/librecad/metadata.xml b/media-gfx/librecad/metadata.xml index 83d16d787..d6b140c97 100644 --- a/media-gfx/librecad/metadata.xml +++ b/media-gfx/librecad/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>slis@gentoo.org</email> - </maintainer> - <use> - <flag name="3d">Require all 2D coordinates stored as 3D</flag> - <flag name="tools">Build additional tool programs: tff2lff</flag> - </use> - <upstream> - <remote-id type="github">LibreCAD/LibreCAD</remote-id> - </upstream> + <maintainer type="person"> + <email>slis@gentoo.org</email> + </maintainer> + <use> + <flag name="3d">Require all 2D coordinates stored as 3D</flag> + <flag name="tools">Build additional tool programs: tff2lff</flag> + </use> + <upstream> + <remote-id type="github">LibreCAD/LibreCAD</remote-id> + </upstream> </pkgmetadata> diff --git a/media-libs/avbin-bin/metadata.xml b/media-libs/avbin-bin/metadata.xml index f48f5eaa0..633797339 100644 --- a/media-libs/avbin-bin/metadata.xml +++ b/media-libs/avbin-bin/metadata.xml @@ -1,13 +1,13 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>grozin@gentoo.org</email> - <name>Andrey Grozin</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>AVbin is a thin wrapper around FFmpeg</longdescription> + <maintainer type="person"> + <email>grozin@gentoo.org</email> + <name>Andrey Grozin</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>AVbin is a thin wrapper around FFmpeg</longdescription> </pkgmetadata> diff --git a/media-libs/glbinding/metadata.xml b/media-libs/glbinding/metadata.xml index 5f82e29cb..2fa046d66 100644 --- a/media-libs/glbinding/metadata.xml +++ b/media-libs/glbinding/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> glbinding leverages modern C++11 features like enum classes, lambdas, and variadic templates, instead of relying on macros; all OpenGL symbols are real functions and variables. It provides @@ -21,7 +21,7 @@ (gl.xml) glbinding is generated using python scripts and templates that can be easily adapted to fit custom needs. </longdescription> - <upstream> - <remote-id type="github">cginternals/glbinding</remote-id> - </upstream> + <upstream> + <remote-id type="github">cginternals/glbinding</remote-id> + </upstream> </pkgmetadata> diff --git a/net-ftp/bbftp-client/metadata.xml b/net-ftp/bbftp-client/metadata.xml index f80d23ed1..a5b1bdacc 100644 --- a/net-ftp/bbftp-client/metadata.xml +++ b/net-ftp/bbftp-client/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> bbFTP is a file transfer software. It implements its own transfer protocol, which is optimized for large files (larger than 2GB) and secure as it does not read the password in a file and encrypts the connection information. diff --git a/net-ftp/bbftp-server/metadata.xml b/net-ftp/bbftp-server/metadata.xml index f80d23ed1..a5b1bdacc 100644 --- a/net-ftp/bbftp-server/metadata.xml +++ b/net-ftp/bbftp-server/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> bbFTP is a file transfer software. It implements its own transfer protocol, which is optimized for large files (larger than 2GB) and secure as it does not read the password in a file and encrypts the connection information. diff --git a/net-misc/bbscp/metadata.xml b/net-misc/bbscp/metadata.xml index bde1b72a7..b398694d2 100644 --- a/net-misc/bbscp/metadata.xml +++ b/net-misc/bbscp/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> bbSCP is a wrapper that provides an SCP-like interface to bbFTP. </longdescription> </pkgmetadata> diff --git a/net-misc/cernbox-client/metadata.xml b/net-misc/cernbox-client/metadata.xml index 1a378d6f4..039060696 100644 --- a/net-misc/cernbox-client/metadata.xml +++ b/net-misc/cernbox-client/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> This service provides a cloud synchronisation service for all CERN users between personal devices (like a laptop) and a centrally-managed data storage. Available to all CERN users. This service provides synchronisation capabilities: @@ -16,12 +16,12 @@ The service is not suitable for critical-path activities like data acquisition, world-wide data distribution and massive batch processing. </longdescription> - <use> - <flag name="dolphin">Install the <pkg>kde-apps/dolphin</pkg> extension</flag> - <flag name="nautilus">Install the <pkg>gnome-base/nautilus</pkg> extension</flag> - <flag name="sftp">Enable sftp transfer support via <pkg>net-libs/libssh</pkg></flag> - </use> - <upstream> - <doc>http://cernbox.web.cern.ch/cernbox/00_getting_started/index.html</doc> - </upstream> + <use> + <flag name="dolphin">Install the <pkg>kde-apps/dolphin</pkg> extension</flag> + <flag name="nautilus">Install the <pkg>gnome-base/nautilus</pkg> extension</flag> + <flag name="sftp">Enable sftp transfer support via <pkg>net-libs/libssh</pkg></flag> + </use> + <upstream> + <doc>http://cernbox.web.cern.ch/cernbox/00_getting_started/index.html</doc> + </upstream> </pkgmetadata> diff --git a/perl-core/encoding-warnings/metadata.xml b/perl-core/encoding-warnings/metadata.xml index d7298d70a..90bb64f30 100644 --- a/perl-core/encoding-warnings/metadata.xml +++ b/perl-core/encoding-warnings/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mail@akhuettel.de</email> - </maintainer> + <maintainer type="person"> + <email>mail@akhuettel.de</email> + </maintainer> </pkgmetadata> diff --git a/sci-astronomy/bpz/metadata.xml b/sci-astronomy/bpz/metadata.xml index 8eb205b89..b57d8eab6 100644 --- a/sci-astronomy/bpz/metadata.xml +++ b/sci-astronomy/bpz/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Bayesian Photometric Redshifts is a method to infere photometric redshifts of galaxies. </longdescription> diff --git a/sci-astronomy/eazy/metadata.xml b/sci-astronomy/eazy/metadata.xml index 277bb09c5..695876072 100644 --- a/sci-astronomy/eazy/metadata.xml +++ b/sci-astronomy/eazy/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Easy and Accurate Zphot from Yale is a photometric redshift code designed to produce high-quality redshifts from 0 to 4 for situations where complete spectroscopic calibration samples are not available. diff --git a/sci-astronomy/eye/metadata.xml b/sci-astronomy/eye/metadata.xml index 733ea2726..964c66ad9 100644 --- a/sci-astronomy/eye/metadata.xml +++ b/sci-astronomy/eye/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> In EyE (Enhance Your Extraction) an artificial neural network connected to pixels of a moving window (retina) is trained to associate these input stimuli to the corresponding response in one diff --git a/sci-astronomy/galfit-bin/metadata.xml b/sci-astronomy/galfit-bin/metadata.xml index d66d6253b..6b4fa6b4a 100644 --- a/sci-astronomy/galfit-bin/metadata.xml +++ b/sci-astronomy/galfit-bin/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> GALFIT is a data analysis algorithm that fits 2-D analytic functions to galaxies and point sources directly to digital images. </longdescription> diff --git a/sci-astronomy/lephare/metadata.xml b/sci-astronomy/lephare/metadata.xml index ccde13979..508212313 100644 --- a/sci-astronomy/lephare/metadata.xml +++ b/sci-astronomy/lephare/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Le Photometric Analysis for Redshift Estimate is a set of commands to compute photometric redshifts and to perform SED fitting. </longdescription> diff --git a/sci-astronomy/libthesky/metadata.xml b/sci-astronomy/libthesky/metadata.xml index 374f32bf7..1ce9631c7 100644 --- a/sci-astronomy/libthesky/metadata.xml +++ b/sci-astronomy/libthesky/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>AstroFloyd@gmail.com</email> - <name>AstroFloyd</name> - </maintainer> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">libthesky</remote-id> - </upstream> + <maintainer type="person"> + <email>AstroFloyd@gmail.com</email> + <name>AstroFloyd</name> + </maintainer> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">libthesky</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-astronomy/missfits/metadata.xml b/sci-astronomy/missfits/metadata.xml index 3a1cc2498..3115c8d55 100644 --- a/sci-astronomy/missfits/metadata.xml +++ b/sci-astronomy/missfits/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> MissFITS is a program that performs basic maintenance and packaging tasks on FITS files using an optimised FITS library. MissFITS can: * add/edit/remove FITS header keywords diff --git a/sci-astronomy/mosstack/metadata.xml b/sci-astronomy/mosstack/metadata.xml index df5606cca..570109a05 100644 --- a/sci-astronomy/mosstack/metadata.xml +++ b/sci-astronomy/mosstack/metadata.xml @@ -1,23 +1,23 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mikko.laine@gmail.com</email> - <name>Mikko Laine</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mikko.laine@gmail.com</email> + <name>Mikko Laine</name> + </maintainer> + <longdescription> An open source stacking software for astronomical images taken with a DSLR camera. Mosstack can calibrate, debayer, register, align and stack photos taken with modern DSLR's from Canon. It has a command line user interface inspired by AstroSurf IRIS and a graphical user interface written with PyQt4 </longdescription> - <use> - <flag name="opencl">Enables OpenCL support and pulls in pyopencl. This makes + <use> + <flag name="opencl">Enables OpenCL support and pulls in pyopencl. This makes some operations much faster but requires specific hardware and drivers.</flag> - <flag name="qt4">Pulls in PyQt4. Program works on command line interface + <flag name="qt4">Pulls in PyQt4. Program works on command line interface without it but for GUI the library is required.</flag> - </use> - <upstream> - <remote-id type="bitbucket">mikko_laine/mosstack</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="bitbucket">mikko_laine/mosstack</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-astronomy/psfex/metadata.xml b/sci-astronomy/psfex/metadata.xml index 45b00a7e9..5121f0c8d 100644 --- a/sci-astronomy/psfex/metadata.xml +++ b/sci-astronomy/psfex/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> PSFEx (“PSF Extractor”) extracts models of the Point Spread Function (PSF) from FITS images processed with <pkg>sci-libs/sextractor</pkg>, and measures the quality of images. The generated PSF models can be used for model-fitting photometry or morphological analyses. </longdescription> -<use> - <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> -</use> + <use> + <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> + </use> </pkgmetadata> diff --git a/sci-astronomy/scamp/metadata.xml b/sci-astronomy/scamp/metadata.xml index d337960db..5b8a3c398 100644 --- a/sci-astronomy/scamp/metadata.xml +++ b/sci-astronomy/scamp/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SCAMP computes astrometric and photometric solutions from SExtractor catalogs and stores them in header files. These headers files can be read by SWarp to coadd images. </longdescription> -<use> - <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> -</use> + <use> + <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> + </use> </pkgmetadata> diff --git a/sci-astronomy/sextractor/metadata.xml b/sci-astronomy/sextractor/metadata.xml index 87b74a0a9..651b20e47 100644 --- a/sci-astronomy/sextractor/metadata.xml +++ b/sci-astronomy/sextractor/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> -<email>sci-astronomy@gentoo.org</email> -<name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SExtractor (Source Extractor) is a program that builds a catalogue of objects from an astronomical image. Although it is particularly oriented towards reduction of large scale galaxy-survey data, it @@ -13,10 +13,10 @@ ability to automatically separate stars and galaxy using neural networks. </longdescription> -<use> -<flag name="modelfit"> + <use> + <flag name="modelfit"> Enable profile model fitting, needs <pkg>sci-libs/atlas</pkg> and <pkg>sci-libs/fftw</pkg> </flag> -</use> + </use> </pkgmetadata> diff --git a/sci-astronomy/skymaker/metadata.xml b/sci-astronomy/skymaker/metadata.xml index a5fb71602..18cb8766d 100644 --- a/sci-astronomy/skymaker/metadata.xml +++ b/sci-astronomy/skymaker/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SkyMaker is a program that simulates astronomical images. It accepts object lists in ASCII generated by the Stuff program to produce realistic astronomical fields. There are various options for the user: diff --git a/sci-astronomy/starlink-bin/metadata.xml b/sci-astronomy/starlink-bin/metadata.xml index 1d4be9081..111f0287a 100644 --- a/sci-astronomy/starlink-bin/metadata.xml +++ b/sci-astronomy/starlink-bin/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> The Starlink Project, referred to by users as Starlink and by developers as simply The Project, was a UK astronomical computing project which supplied general-purpose data reduction diff --git a/sci-astronomy/stiff/metadata.xml b/sci-astronomy/stiff/metadata.xml index 27ad43608..1ab3a27af 100644 --- a/sci-astronomy/stiff/metadata.xml +++ b/sci-astronomy/stiff/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> STIFF is a program that convert scientific FITS images to the more popular TIFF, in 8 (grayscale) or 24 (true colour: 3 times 8) bits per pixel. diff --git a/sci-astronomy/stilts/metadata.xml b/sci-astronomy/stilts/metadata.xml index 9a91a45ff..46b14de5c 100644 --- a/sci-astronomy/stilts/metadata.xml +++ b/sci-astronomy/stilts/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> The Starlink Tables Infrastructure Library Tool Set is a set of command-line tools based on STIL, the Starlink Tables Infrastructure Library. It deals with the processing of tabular data; the package diff --git a/sci-astronomy/stuff/metadata.xml b/sci-astronomy/stuff/metadata.xml index c3150e8cd..5970575e9 100644 --- a/sci-astronomy/stuff/metadata.xml +++ b/sci-astronomy/stuff/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Stuff is a program that simulates “perfect” astronomical catalogues. It generate object lists in ASCII which can read by the SkyMaker program to produce realistic astronomical fields. diff --git a/sci-astronomy/swarp/metadata.xml b/sci-astronomy/swarp/metadata.xml index 988b2feef..110a1fe70 100644 --- a/sci-astronomy/swarp/metadata.xml +++ b/sci-astronomy/swarp/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SWarp takes astronomical FITS images with a WCS-like projection, resample and stack them all. </longdescription> diff --git a/sci-astronomy/topcat/metadata.xml b/sci-astronomy/topcat/metadata.xml index 70a38f517..4cf0383c9 100644 --- a/sci-astronomy/topcat/metadata.xml +++ b/sci-astronomy/topcat/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Tool for OPerations on Catalogues And Tables is an interactive graphical viewer and editor for tabular data. Its aim is to provide most of the facilities that astronomers need for analysis and diff --git a/sci-astronomy/weightwatcher/metadata.xml b/sci-astronomy/weightwatcher/metadata.xml index 86c4c7dc6..26af98c3c 100644 --- a/sci-astronomy/weightwatcher/metadata.xml +++ b/sci-astronomy/weightwatcher/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> WeightWatcher is a program that combines weight-maps, flag-maps and polygon data in order to produce control maps which can directly be used in astronomical image-processing packages like Drizzle, diff --git a/sci-astronomy/zebra/metadata.xml b/sci-astronomy/zebra/metadata.xml index 76eebf20b..ba10176c2 100644 --- a/sci-astronomy/zebra/metadata.xml +++ b/sci-astronomy/zebra/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> The Zurich Extragalactic Bayesian Redshift Analyzer is a software to compute and analyze photometric redshifts of galaxies. ZEBRA combines and extends several of the classical approaches to diff --git a/sci-biology/ANGLE-bin/metadata.xml b/sci-biology/ANGLE-bin/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/ANGLE-bin/metadata.xml +++ b/sci-biology/ANGLE-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/AlignGraph/metadata.xml b/sci-biology/AlignGraph/metadata.xml index 7863f973a..ebfe51ec8 100644 --- a/sci-biology/AlignGraph/metadata.xml +++ b/sci-biology/AlignGraph/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">baoe/AlignGraph</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">baoe/AlignGraph</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Atlas-Link/metadata.xml b/sci-biology/Atlas-Link/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/Atlas-Link/metadata.xml +++ b/sci-biology/Atlas-Link/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/Atlas/metadata.xml b/sci-biology/Atlas/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/Atlas/metadata.xml +++ b/sci-biology/Atlas/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/Atlas2/metadata.xml b/sci-biology/Atlas2/metadata.xml index 4338746db..7e2e21ffd 100644 --- a/sci-biology/Atlas2/metadata.xml +++ b/sci-biology/Atlas2/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> Atlas2 is a next-generation sequencing suite of variant analysis tools specializing in the separation of true SNPs and insertions and deletions (indels) from sequencing and mapping errors in Whole Exome Capture Sequencing (WECS) data. </longdescription> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Atlas_GapFill/metadata.xml b/sci-biology/Atlas_GapFill/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/Atlas_GapFill/metadata.xml +++ b/sci-biology/Atlas_GapFill/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/BBmap/metadata.xml b/sci-biology/BBmap/metadata.xml index 75990319d..2ca43ff4d 100644 --- a/sci-biology/BBmap/metadata.xml +++ b/sci-biology/BBmap/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">bbmap</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">bbmap</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/BG7/metadata.xml b/sci-biology/BG7/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-biology/BG7/metadata.xml +++ b/sci-biology/BG7/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/BRAKER/metadata.xml b/sci-biology/BRAKER/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/BRAKER/metadata.xml +++ b/sci-biology/BRAKER/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/BRANCH/metadata.xml b/sci-biology/BRANCH/metadata.xml index ab90aa364..c2ec6485a 100644 --- a/sci-biology/BRANCH/metadata.xml +++ b/sci-biology/BRANCH/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">baoe/BRANCH</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">baoe/BRANCH</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/BamView/metadata.xml b/sci-biology/BamView/metadata.xml index ecc16433b..93e06748e 100644 --- a/sci-biology/BamView/metadata.xml +++ b/sci-biology/BamView/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">bamview</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">bamview</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/BlastToSam/metadata.xml b/sci-biology/BlastToSam/metadata.xml index 86bbb3764..5a3c7d51d 100644 --- a/sci-biology/BlastToSam/metadata.xml +++ b/sci-biology/BlastToSam/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">AstrorEnales/BlastToSam</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">AstrorEnales/BlastToSam</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/DisEMBL/metadata.xml b/sci-biology/DisEMBL/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/DisEMBL/metadata.xml +++ b/sci-biology/DisEMBL/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/EBARDenovo/metadata.xml b/sci-biology/EBARDenovo/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/EBARDenovo/metadata.xml +++ b/sci-biology/EBARDenovo/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/ESTate/metadata.xml b/sci-biology/ESTate/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ESTate/metadata.xml +++ b/sci-biology/ESTate/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/FLASH/metadata.xml b/sci-biology/FLASH/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/FLASH/metadata.xml +++ b/sci-biology/FLASH/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Fastaq/metadata.xml b/sci-biology/Fastaq/metadata.xml index 04b6bd54b..d5f0ab569 100644 --- a/sci-biology/Fastaq/metadata.xml +++ b/sci-biology/Fastaq/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">sanger-pathogens/Fastaq</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">sanger-pathogens/Fastaq</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/GAL/metadata.xml b/sci-biology/GAL/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/GAL/metadata.xml +++ b/sci-biology/GAL/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/Gambit/metadata.xml b/sci-biology/Gambit/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/Gambit/metadata.xml +++ b/sci-biology/Gambit/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ICC/metadata.xml b/sci-biology/ICC/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ICC/metadata.xml +++ b/sci-biology/ICC/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/IMAGE/metadata.xml b/sci-biology/IMAGE/metadata.xml index 3dcd782d1..9c059c62e 100644 --- a/sci-biology/IMAGE/metadata.xml +++ b/sci-biology/IMAGE/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">image2</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">image2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/InterMine/metadata.xml b/sci-biology/InterMine/metadata.xml index 5c9c50b32..0114515a6 100644 --- a/sci-biology/InterMine/metadata.xml +++ b/sci-biology/InterMine/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">intermine/intermine</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">intermine/intermine</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/KING/metadata.xml b/sci-biology/KING/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/KING/metadata.xml +++ b/sci-biology/KING/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/KaKs_Calculator/metadata.xml b/sci-biology/KaKs_Calculator/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/KaKs_Calculator/metadata.xml +++ b/sci-biology/KaKs_Calculator/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MaSuRCA/metadata.xml b/sci-biology/MaSuRCA/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/MaSuRCA/metadata.xml +++ b/sci-biology/MaSuRCA/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MagicViewer/metadata.xml b/sci-biology/MagicViewer/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/MagicViewer/metadata.xml +++ b/sci-biology/MagicViewer/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MeV/metadata.xml b/sci-biology/MeV/metadata.xml index 6ed96d4bc..bd7adb92f 100644 --- a/sci-biology/MeV/metadata.xml +++ b/sci-biology/MeV/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/MochiView/metadata.xml b/sci-biology/MochiView/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/MochiView/metadata.xml +++ b/sci-biology/MochiView/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MolBioLib/metadata.xml b/sci-biology/MolBioLib/metadata.xml index cfa9e50ee..3b9e38617 100644 --- a/sci-biology/MolBioLib/metadata.xml +++ b/sci-biology/MolBioLib/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">molbiolib</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">molbiolib</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/MuSeqBox/metadata.xml b/sci-biology/MuSeqBox/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/MuSeqBox/metadata.xml +++ b/sci-biology/MuSeqBox/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/NGSTools/metadata.xml b/sci-biology/NGSTools/metadata.xml index fe6859dd7..642261079 100644 --- a/sci-biology/NGSTools/metadata.xml +++ b/sci-biology/NGSTools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">ngsep</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">ngsep</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/OBO-Edit/metadata.xml b/sci-biology/OBO-Edit/metadata.xml index 115a34c41..acbbc35a4 100644 --- a/sci-biology/OBO-Edit/metadata.xml +++ b/sci-biology/OBO-Edit/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/ONTO-PERL/metadata.xml b/sci-biology/ONTO-PERL/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/ONTO-PERL/metadata.xml +++ b/sci-biology/ONTO-PERL/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ORFcor/metadata.xml b/sci-biology/ORFcor/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ORFcor/metadata.xml +++ b/sci-biology/ORFcor/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/RADtools/metadata.xml b/sci-biology/RADtools/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/RADtools/metadata.xml +++ b/sci-biology/RADtools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/RSeQC/metadata.xml b/sci-biology/RSeQC/metadata.xml index 54bdfb597..5c8442330 100644 --- a/sci-biology/RSeQC/metadata.xml +++ b/sci-biology/RSeQC/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">rseqc</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">rseqc</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Ray/metadata.xml b/sci-biology/Ray/metadata.xml index fb7092ff7..982286fb0 100644 --- a/sci-biology/Ray/metadata.xml +++ b/sci-biology/Ray/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/Rcorrector/metadata.xml b/sci-biology/Rcorrector/metadata.xml index 7cca6fb36..3d9746ae9 100644 --- a/sci-biology/Rcorrector/metadata.xml +++ b/sci-biology/Rcorrector/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">mourisl/Rcorrector</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">mourisl/Rcorrector</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/SEECER/metadata.xml b/sci-biology/SEECER/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/SEECER/metadata.xml +++ b/sci-biology/SEECER/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/SOAPdenovo2/metadata.xml b/sci-biology/SOAPdenovo2/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/SOAPdenovo2/metadata.xml +++ b/sci-biology/SOAPdenovo2/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/SPAdes/metadata.xml b/sci-biology/SPAdes/metadata.xml index 4baa30821..f1a8d4826 100644 --- a/sci-biology/SPAdes/metadata.xml +++ b/sci-biology/SPAdes/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> truSPAdes includes support for Illumina TruSeq Synthetic Long Read technology reads. hammer and ionhammer are read error correcting modules for Illumina /IonTorrent reads, resp. dipspades is assembly module for highly polymorphic diploid genomes diff --git a/sci-biology/SSAKE/metadata.xml b/sci-biology/SSAKE/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/SSAKE/metadata.xml +++ b/sci-biology/SSAKE/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/STAR/metadata.xml b/sci-biology/STAR/metadata.xml index f053775b5..1f2f45f25 100644 --- a/sci-biology/STAR/metadata.xml +++ b/sci-biology/STAR/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">alexdobin/STAR</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">alexdobin/STAR</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Scaffolder-evaluation/metadata.xml b/sci-biology/Scaffolder-evaluation/metadata.xml index ede9259b5..337db209e 100644 --- a/sci-biology/Scaffolder-evaluation/metadata.xml +++ b/sci-biology/Scaffolder-evaluation/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">martinghunt/Scaffolder-evaluation</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">martinghunt/Scaffolder-evaluation</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/SnpEff/metadata.xml b/sci-biology/SnpEff/metadata.xml index c7accda31..51896f0c1 100644 --- a/sci-biology/SnpEff/metadata.xml +++ b/sci-biology/SnpEff/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">snpeff</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">snpeff</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/SolexaQA/metadata.xml b/sci-biology/SolexaQA/metadata.xml index f7714240a..6196a9f60 100644 --- a/sci-biology/SolexaQA/metadata.xml +++ b/sci-biology/SolexaQA/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">solexaqa</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">solexaqa</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/StarORF/metadata.xml b/sci-biology/StarORF/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/StarORF/metadata.xml +++ b/sci-biology/StarORF/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/TransDecoder/metadata.xml b/sci-biology/TransDecoder/metadata.xml index 1a522bbe1..544c79e74 100644 --- a/sci-biology/TransDecoder/metadata.xml +++ b/sci-biology/TransDecoder/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">TransDecoder/TransDecoder</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">TransDecoder/TransDecoder</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Trinotate/metadata.xml b/sci-biology/Trinotate/metadata.xml index b183ac8ee..eaf731f09 100644 --- a/sci-biology/Trinotate/metadata.xml +++ b/sci-biology/Trinotate/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">Trinotate/Trinotate</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">Trinotate/Trinotate</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/VarScan-bin/metadata.xml b/sci-biology/VarScan-bin/metadata.xml index 01850f614..eab817006 100644 --- a/sci-biology/VarScan-bin/metadata.xml +++ b/sci-biology/VarScan-bin/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">dkoboldt/varscan</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">dkoboldt/varscan</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/VarScan/metadata.xml b/sci-biology/VarScan/metadata.xml index c9cbb67e6..0ab7b8b95 100644 --- a/sci-biology/VarScan/metadata.xml +++ b/sci-biology/VarScan/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">dkoboldt/varscan</remote-id> - <remote-id type="sourceforge">varscan</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">dkoboldt/varscan</remote-id> + <remote-id type="sourceforge">varscan</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/VelvetOptimiser/metadata.xml b/sci-biology/VelvetOptimiser/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/VelvetOptimiser/metadata.xml +++ b/sci-biology/VelvetOptimiser/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/YASRA/metadata.xml b/sci-biology/YASRA/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/YASRA/metadata.xml +++ b/sci-biology/YASRA/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/abacas/metadata.xml b/sci-biology/abacas/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/abacas/metadata.xml +++ b/sci-biology/abacas/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/act-bin/metadata.xml b/sci-biology/act-bin/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/act-bin/metadata.xml +++ b/sci-biology/act-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/aghermann/metadata.xml b/sci-biology/aghermann/metadata.xml index b62282781..7d37ce2e8 100644 --- a/sci-biology/aghermann/metadata.xml +++ b/sci-biology/aghermann/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>johnhommer@gmail.com</email> - <name>Andrei Zavada</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>johnhommer@gmail.com</email> + <name>Andrei Zavada</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> Aghermann is a program designed around a common workflow in sleep-research, complete with scoring facility; cairo subpixel drawing on screen or to file; conventional PSD and EEG Micrcontinuity diff --git a/sci-biology/align_to_scf/metadata.xml b/sci-biology/align_to_scf/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/align_to_scf/metadata.xml +++ b/sci-biology/align_to_scf/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/amos/metadata.xml b/sci-biology/amos/metadata.xml index 5b2ca1a74..5c72bf01a 100644 --- a/sci-biology/amos/metadata.xml +++ b/sci-biology/amos/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> AMOS is collection of tools and class interfaces for the assembly of DNA sequencing reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation </longdescription> - <upstream> - <remote-id type="sourceforge">amos</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">amos</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/ampliconnoise/metadata.xml b/sci-biology/ampliconnoise/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ampliconnoise/metadata.xml +++ b/sci-biology/ampliconnoise/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/angsd/metadata.xml b/sci-biology/angsd/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/angsd/metadata.xml +++ b/sci-biology/angsd/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ants/metadata.xml b/sci-biology/ants/metadata.xml index 71c2ce955..6f359a5c0 100644 --- a/sci-biology/ants/metadata.xml +++ b/sci-biology/ants/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>ANTs extracts information from complex datasets that include imaging (Word Cloud). + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>ANTs extracts information from complex datasets that include imaging (Word Cloud). Paired with ANTsR (answer), ANTs is useful for managing, interpreting and visualizing multidimensional data. ANTs is popularly considered a state-of-the-art medical image registration and segmentation toolkit. ANTsR is an emerging tool supporting standardized multimodality image analysis. ANTs depends diff --git a/sci-biology/apollo/metadata.xml b/sci-biology/apollo/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/apollo/metadata.xml +++ b/sci-biology/apollo/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/arachne/metadata.xml b/sci-biology/arachne/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/arachne/metadata.xml +++ b/sci-biology/arachne/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/argo-bin/metadata.xml b/sci-biology/argo-bin/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/argo-bin/metadata.xml +++ b/sci-biology/argo-bin/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/argo/metadata.xml b/sci-biology/argo/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/argo/metadata.xml +++ b/sci-biology/argo/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/artemis/metadata.xml b/sci-biology/artemis/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/artemis/metadata.xml +++ b/sci-biology/artemis/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/assembly-stats/metadata.xml b/sci-biology/assembly-stats/metadata.xml index e528fb05f..33f80074b 100644 --- a/sci-biology/assembly-stats/metadata.xml +++ b/sci-biology/assembly-stats/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">martinghunt/assembly-stats</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">martinghunt/assembly-stats</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/atsas/metadata.xml b/sci-biology/atsas/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/atsas/metadata.xml +++ b/sci-biology/atsas/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/augustus/metadata.xml b/sci-biology/augustus/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/augustus/metadata.xml +++ b/sci-biology/augustus/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bam-readcount/metadata.xml b/sci-biology/bam-readcount/metadata.xml index 2f50f6cb0..4a0f6e04b 100644 --- a/sci-biology/bam-readcount/metadata.xml +++ b/sci-biology/bam-readcount/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">genome/bam-readcount</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">genome/bam-readcount</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/bambino/metadata.xml b/sci-biology/bambino/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/bambino/metadata.xml +++ b/sci-biology/bambino/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/bambus/metadata.xml b/sci-biology/bambus/metadata.xml index 1054fc1ed..6f58cca41 100644 --- a/sci-biology/bambus/metadata.xml +++ b/sci-biology/bambus/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/barnacle/metadata.xml b/sci-biology/barnacle/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/barnacle/metadata.xml +++ b/sci-biology/barnacle/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/barrnap/metadata.xml b/sci-biology/barrnap/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/barrnap/metadata.xml +++ b/sci-biology/barrnap/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/beagle/metadata.xml b/sci-biology/beagle/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/beagle/metadata.xml +++ b/sci-biology/beagle/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/beaglecall/metadata.xml b/sci-biology/beaglecall/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/beaglecall/metadata.xml +++ b/sci-biology/beaglecall/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bedops/metadata.xml b/sci-biology/bedops/metadata.xml index 275007996..5398e25bb 100644 --- a/sci-biology/bedops/metadata.xml +++ b/sci-biology/bedops/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">bedops/bedops</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">bedops/bedops</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/bfast/metadata.xml b/sci-biology/bfast/metadata.xml index 45f337087..b60dfbcbc 100644 --- a/sci-biology/bfast/metadata.xml +++ b/sci-biology/bfast/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">bfast</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">bfast</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/bio-cd-hit-report/metadata.xml b/sci-biology/bio-cd-hit-report/metadata.xml index ed211409a..becca79c5 100644 --- a/sci-biology/bio-cd-hit-report/metadata.xml +++ b/sci-biology/bio-cd-hit-report/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">bio-cd-hit-report</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">bio-cd-hit-report</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/biobambam/metadata.xml b/sci-biology/biobambam/metadata.xml index 38f3b45cf..25aa7fc17 100644 --- a/sci-biology/biobambam/metadata.xml +++ b/sci-biology/biobambam/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> This package contains some tools for processing BAM files including bamcollate2: reads BAM and writes BAM reordered such that alignment or collated by query name @@ -15,7 +15,7 @@ bamrecompress: reads BAM and writes BAM with a defined compression setting. This bamsort: reads BAM and writes BAM resorted by coordinates or query name bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name </longdescription> - <upstream> - <remote-id type="github">gt1/biobambam</remote-id> - </upstream> + <upstream> + <remote-id type="github">gt1/biobambam</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/biobambam2/metadata.xml b/sci-biology/biobambam2/metadata.xml index cb036d969..88dabed5a 100644 --- a/sci-biology/biobambam2/metadata.xml +++ b/sci-biology/biobambam2/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> This package contains some tools for processing BAM files including bamcollate2: reads BAM and writes BAM reordered such that alignment or collated by query name @@ -15,7 +15,7 @@ bamrecompress: reads BAM and writes BAM with a defined compression setting. This bamsort: reads BAM and writes BAM resorted by coordinates or query name bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name </longdescription> - <upstream> - <remote-id type="github">gt1/biobambam2</remote-id> - </upstream> + <upstream> + <remote-id type="github">gt1/biobambam2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/biopieces/metadata.xml b/sci-biology/biopieces/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/biopieces/metadata.xml +++ b/sci-biology/biopieces/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bismark/metadata.xml b/sci-biology/bismark/metadata.xml index 00744d612..7fbe43fac 100644 --- a/sci-biology/bismark/metadata.xml +++ b/sci-biology/bismark/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>yanlinlin82@gmail.com</email> - <name>Linlin Yan</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>yanlinlin82@gmail.com</email> + <name>Linlin Yan</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> Bismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step. The output can be easily imported into a genome viewer, such as SeqMonk, and enables a researcher diff --git a/sci-biology/blasr/metadata.xml b/sci-biology/blasr/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/blasr/metadata.xml +++ b/sci-biology/blasr/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/blat/metadata.xml +++ b/sci-biology/blat/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/blue/metadata.xml b/sci-biology/blue/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/blue/metadata.xml +++ b/sci-biology/blue/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/brat/metadata.xml b/sci-biology/brat/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/brat/metadata.xml +++ b/sci-biology/brat/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/brat_bw/metadata.xml b/sci-biology/brat_bw/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/brat_bw/metadata.xml +++ b/sci-biology/brat_bw/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/brat_nova/metadata.xml b/sci-biology/brat_nova/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/brat_nova/metadata.xml +++ b/sci-biology/brat_nova/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/bru2nii/metadata.xml b/sci-biology/bru2nii/metadata.xml index 90ef9367d..65fc7e751 100644 --- a/sci-biology/bru2nii/metadata.xml +++ b/sci-biology/bru2nii/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> This is a simple tool for converting Bruker ParaVision MRI data to the NIfTI file format. It includes both a drag-and-drop graphical interface (Bru2Nii) as well as a command line tool (Bru2). </longdescription> - <upstream> - <remote-id type="github">neurolabusc/Bru2Nii</remote-id> - </upstream> - <use> - <flag name="gui">Build graphical user interface</flag> - </use> + <upstream> + <remote-id type="github">neurolabusc/Bru2Nii</remote-id> + </upstream> + <use> + <flag name="gui">Build graphical user interface</flag> + </use> </pkgmetadata> diff --git a/sci-biology/bx-python/metadata.xml b/sci-biology/bx-python/metadata.xml index 8cdea5d5a..3e13342e3 100644 --- a/sci-biology/bx-python/metadata.xml +++ b/sci-biology/bx-python/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="bitbucket">james_taylor/bx-python</remote-id> - <remote-id type="pypi">bx-python</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="bitbucket">james_taylor/bx-python</remote-id> + <remote-id type="pypi">bx-python</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/caftools/metadata.xml b/sci-biology/caftools/metadata.xml index 81b61ad3b..ebb2f204c 100644 --- a/sci-biology/caftools/metadata.xml +++ b/sci-biology/caftools/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> CAF is a text format for describing sequence assemblies. It is acedb-compliant and is an extension of the ace-file format used earlier, but with support for base quality measures and a more extensive description of the Sequence data. diff --git a/sci-biology/cast-bin/metadata.xml b/sci-biology/cast-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cast-bin/metadata.xml +++ b/sci-biology/cast-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cd-hit-auxtools/metadata.xml b/sci-biology/cd-hit-auxtools/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cd-hit-auxtools/metadata.xml +++ b/sci-biology/cd-hit-auxtools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cd-hit/metadata.xml b/sci-biology/cd-hit/metadata.xml index 7f866330d..95aec8089 100644 --- a/sci-biology/cd-hit/metadata.xml +++ b/sci-biology/cd-hit/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-biology/cdbfasta/metadata.xml b/sci-biology/cdbfasta/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/cdbfasta/metadata.xml +++ b/sci-biology/cdbfasta/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/cegma/metadata.xml b/sci-biology/cegma/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cegma/metadata.xml +++ b/sci-biology/cegma/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cg-cat/metadata.xml b/sci-biology/cg-cat/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cg-cat/metadata.xml +++ b/sci-biology/cg-cat/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cgview-bin/metadata.xml b/sci-biology/cgview-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cgview-bin/metadata.xml +++ b/sci-biology/cgview-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/clover/metadata.xml b/sci-biology/clover/metadata.xml index cc4673633..770d40f6d 100644 --- a/sci-biology/clover/metadata.xml +++ b/sci-biology/clover/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>maintainer-wanted@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>maintainer-wanted@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cluster/metadata.xml b/sci-biology/cluster/metadata.xml index 2c86135a2..dbca977f9 100644 --- a/sci-biology/cluster/metadata.xml +++ b/sci-biology/cluster/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>je_fro@gentoo.org</email> - <name>Jeff Gardner</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>je_fro@gentoo.org</email> + <name>Jeff Gardner</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> Cluster provides an interface to access methods of gene expression data analysis. </longdescription> diff --git a/sci-biology/clview/metadata.xml b/sci-biology/clview/metadata.xml index 31020917d..7adf609cd 100644 --- a/sci-biology/clview/metadata.xml +++ b/sci-biology/clview/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/cnrun/metadata.xml b/sci-biology/cnrun/metadata.xml index 1b2b557a9..7e97ca658 100644 --- a/sci-biology/cnrun/metadata.xml +++ b/sci-biology/cnrun/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>johnhommer@gmail.com</email> - <name>Andrei Zavada</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>johnhommer@gmail.com</email> + <name>Andrei Zavada</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> CNrun is a neuronal network simulator, with these features: * a conductance- and rate-based Hodgkin-Huxley neurons, a Rall and diff --git a/sci-biology/codonw/metadata.xml b/sci-biology/codonw/metadata.xml index fcb129873..7cadd7d4c 100644 --- a/sci-biology/codonw/metadata.xml +++ b/sci-biology/codonw/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">codonw</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">codonw</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/conform-gt/metadata.xml b/sci-biology/conform-gt/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/conform-gt/metadata.xml +++ b/sci-biology/conform-gt/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/conifer/metadata.xml b/sci-biology/conifer/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/conifer/metadata.xml +++ b/sci-biology/conifer/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/conrad/metadata.xml b/sci-biology/conrad/metadata.xml index 8d38b0b1a..814dcabcc 100644 --- a/sci-biology/conrad/metadata.xml +++ b/sci-biology/conrad/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">conradcrf</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">conradcrf</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/consed2gap/metadata.xml b/sci-biology/consed2gap/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/consed2gap/metadata.xml +++ b/sci-biology/consed2gap/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/coral/metadata.xml b/sci-biology/coral/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/coral/metadata.xml +++ b/sci-biology/coral/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cortex_var/metadata.xml b/sci-biology/cortex_var/metadata.xml index aeef1bbec..a2867d6fd 100644 --- a/sci-biology/cortex_var/metadata.xml +++ b/sci-biology/cortex_var/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">cortexassembler</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">cortexassembler</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/cramtools/metadata.xml b/sci-biology/cramtools/metadata.xml index 0a1821f4a..5a55ad312 100644 --- a/sci-biology/cramtools/metadata.xml +++ b/sci-biology/cramtools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">enasequence/cramtools</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">enasequence/cramtools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/cross_genome/metadata.xml b/sci-biology/cross_genome/metadata.xml index 18786886b..28cd3af39 100644 --- a/sci-biology/cross_genome/metadata.xml +++ b/sci-biology/cross_genome/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">phusion2</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">phusion2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/cutadapt/metadata.xml b/sci-biology/cutadapt/metadata.xml index b6f11bf51..6099a3fab 100644 --- a/sci-biology/cutadapt/metadata.xml +++ b/sci-biology/cutadapt/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">marcelm/cutadapt</remote-id> - <remote-id type="pypi">cutadapt</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">marcelm/cutadapt</remote-id> + <remote-id type="pypi">cutadapt</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/dawg/metadata.xml b/sci-biology/dawg/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/dawg/metadata.xml +++ b/sci-biology/dawg/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/dcmstack/metadata.xml b/sci-biology/dcmstack/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-biology/dcmstack/metadata.xml +++ b/sci-biology/dcmstack/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/deeptools/metadata.xml b/sci-biology/deeptools/metadata.xml index ae7de7d62..a11dba65f 100644 --- a/sci-biology/deeptools/metadata.xml +++ b/sci-biology/deeptools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">fidelram/deepTools</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">fidelram/deepTools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/dipy/metadata.xml b/sci-biology/dipy/metadata.xml index 23f050681..de88739b5 100644 --- a/sci-biology/dipy/metadata.xml +++ b/sci-biology/dipy/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Dipy is a free and open source software project for computational neuroanatomy, focusing mainly on diffusion magnetic resonance imaging (dMRI) analysis. It implements a broad range of algorithms for denoising, registration, reconstruction, tracking, clustering, visualization, and statistical analysis of MRI data. </longdescription> - <upstream> - <remote-id type="github">nipy/dipy</remote-id> - </upstream> + <upstream> + <remote-id type="github">nipy/dipy</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/discrover/metadata.xml b/sci-biology/discrover/metadata.xml index 1055813e9..90c7c21bc 100644 --- a/sci-biology/discrover/metadata.xml +++ b/sci-biology/discrover/metadata.xml @@ -1,28 +1,28 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jonas@maaskola.de</email> - <name>Jonas Maaskola</name> - </maintainer> - <use> - <flag name="cairo"> + <maintainer type="person"> + <email>jonas@maaskola.de</email> + <name>Jonas Maaskola</name> + </maintainer> + <use> + <flag name="cairo"> Use Cairo for sequence logo plotting capabilities </flag> - <flag name="dreme"> + <flag name="dreme"> Enable usage of DREME from the MEME package for seeding </flag> - <flag name="lto"> + <flag name="lto"> Compile with link-time optimization (LTO) </flag> - <flag name="misc_scripts"> + <flag name="misc_scripts"> Install miscellaneous scripts </flag> - <flag name="rmathlib"> + <flag name="rmathlib"> Link to the standalone Rmathlib for statistical routines </flag> - </use> - <upstream> - <remote-id type="github">maaskola/discrover</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="github">maaskola/discrover</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/dna2pep/metadata.xml b/sci-biology/dna2pep/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/dna2pep/metadata.xml +++ b/sci-biology/dna2pep/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ePCR/metadata.xml b/sci-biology/ePCR/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ePCR/metadata.xml +++ b/sci-biology/ePCR/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/edena/metadata.xml b/sci-biology/edena/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/edena/metadata.xml +++ b/sci-biology/edena/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ensembl-tools/metadata.xml b/sci-biology/ensembl-tools/metadata.xml index 2457da65b..7cd2955fb 100644 --- a/sci-biology/ensembl-tools/metadata.xml +++ b/sci-biology/ensembl-tools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">Ensembl/ensembl-tools</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">Ensembl/ensembl-tools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/epga/metadata.xml b/sci-biology/epga/metadata.xml index 615525179..c0597b729 100644 --- a/sci-biology/epga/metadata.xml +++ b/sci-biology/epga/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">bioinfomaticsCSU/EPGA</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">bioinfomaticsCSU/EPGA</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/erpin/metadata.xml b/sci-biology/erpin/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/erpin/metadata.xml +++ b/sci-biology/erpin/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/est2assembly/metadata.xml b/sci-biology/est2assembly/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/est2assembly/metadata.xml +++ b/sci-biology/est2assembly/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/estscan/metadata.xml b/sci-biology/estscan/metadata.xml index 138f8c095..c79c2d1b5 100644 --- a/sci-biology/estscan/metadata.xml +++ b/sci-biology/estscan/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="icc">Undocumented USE</flag> - <flag name="ifc">Undocumented USE</flag> - </use> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="icc">Undocumented USE</flag> + <flag name="ifc">Undocumented USE</flag> + </use> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/eugene/metadata.xml b/sci-biology/eugene/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/eugene/metadata.xml +++ b/sci-biology/eugene/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/eval/metadata.xml b/sci-biology/eval/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/eval/metadata.xml +++ b/sci-biology/eval/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/exomiser-bin/metadata.xml b/sci-biology/exomiser-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/exomiser-bin/metadata.xml +++ b/sci-biology/exomiser-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/exonerate-gff3/metadata.xml b/sci-biology/exonerate-gff3/metadata.xml index 378558dab..34cada23a 100644 --- a/sci-biology/exonerate-gff3/metadata.xml +++ b/sci-biology/exonerate-gff3/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="utils">Unknown</flag> - </use> - <upstream> - <remote-id type="github">hotdogee/exonerate-gff3</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="utils">Unknown</flag> + </use> + <upstream> + <remote-id type="github">hotdogee/exonerate-gff3</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/fastdnaml/metadata.xml b/sci-biology/fastdnaml/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/fastdnaml/metadata.xml +++ b/sci-biology/fastdnaml/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/fastqc/metadata.xml b/sci-biology/fastqc/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/fastqc/metadata.xml +++ b/sci-biology/fastqc/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/fastx_toolkit/metadata.xml b/sci-biology/fastx_toolkit/metadata.xml index 4db9d1693..880cea016 100644 --- a/sci-biology/fastx_toolkit/metadata.xml +++ b/sci-biology/fastx_toolkit/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">agordon/fastx_toolkit</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">agordon/fastx_toolkit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/ffindex/metadata.xml b/sci-biology/ffindex/metadata.xml index 18e09466d..138cb7705 100644 --- a/sci-biology/ffindex/metadata.xml +++ b/sci-biology/ffindex/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/fgap-bin/metadata.xml b/sci-biology/fgap-bin/metadata.xml index 59e8a4413..b53e13d28 100644 --- a/sci-biology/fgap-bin/metadata.xml +++ b/sci-biology/fgap-bin/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">fgap</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">fgap</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/fgap/metadata.xml b/sci-biology/fgap/metadata.xml index 59e8a4413..b53e13d28 100644 --- a/sci-biology/fgap/metadata.xml +++ b/sci-biology/fgap/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">fgap</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">fgap</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/flexbar/metadata.xml b/sci-biology/flexbar/metadata.xml index adfdd237a..e449a61d2 100644 --- a/sci-biology/flexbar/metadata.xml +++ b/sci-biology/flexbar/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/freebayes/metadata.xml b/sci-biology/freebayes/metadata.xml index fdd189bd5..493885416 100644 --- a/sci-biology/freebayes/metadata.xml +++ b/sci-biology/freebayes/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">ekg/freebayes</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">ekg/freebayes</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/fsa/metadata.xml b/sci-biology/fsa/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/fsa/metadata.xml +++ b/sci-biology/fsa/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/full_lengther_next/metadata.xml b/sci-biology/full_lengther_next/metadata.xml index 18e09466d..138cb7705 100644 --- a/sci-biology/full_lengther_next/metadata.xml +++ b/sci-biology/full_lengther_next/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/gap2caf/metadata.xml b/sci-biology/gap2caf/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/gap2caf/metadata.xml +++ b/sci-biology/gap2caf/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/gatk/metadata.xml b/sci-biology/gatk/metadata.xml index baaa7e21c..5a54c7fec 100644 --- a/sci-biology/gatk/metadata.xml +++ b/sci-biology/gatk/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">broadgsa/gatk</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">broadgsa/gatk</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/gemini/metadata.xml b/sci-biology/gemini/metadata.xml index 745bce5e5..260a8b4ae 100644 --- a/sci-biology/gemini/metadata.xml +++ b/sci-biology/gemini/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">arq5x/gemini</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">arq5x/gemini</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/geneid/metadata.xml b/sci-biology/geneid/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/geneid/metadata.xml +++ b/sci-biology/geneid/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/genepop/metadata.xml b/sci-biology/genepop/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/genepop/metadata.xml +++ b/sci-biology/genepop/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/generecon/metadata.xml b/sci-biology/generecon/metadata.xml index ba3b7651b..de97c87f7 100644 --- a/sci-biology/generecon/metadata.xml +++ b/sci-biology/generecon/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>lucas.chiesa@gmail.com</email> - <name>Lucas Chiesa</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>lucas.chiesa@gmail.com</email> + <name>Lucas Chiesa</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/genometools/metadata.xml b/sci-biology/genometools/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/genometools/metadata.xml +++ b/sci-biology/genometools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/genomeview-bin/metadata.xml b/sci-biology/genomeview-bin/metadata.xml index 6646b4398..0f267b755 100644 --- a/sci-biology/genomeview-bin/metadata.xml +++ b/sci-biology/genomeview-bin/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/germline/metadata.xml b/sci-biology/germline/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/germline/metadata.xml +++ b/sci-biology/germline/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/gfftools/metadata.xml b/sci-biology/gfftools/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/gfftools/metadata.xml +++ b/sci-biology/gfftools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email&g |