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-rw-r--r--patches/ccp4/6.1.2/fix-baubles.patch22
-rw-r--r--patches/ccp4/6.1.2/rename-rapper.patch12
-rw-r--r--patches/ccp4/6.1.2/rename-superpose.patch12
-rw-r--r--patches/ccp4/6.1.2/rename-truncate.patch22
4 files changed, 68 insertions, 0 deletions
diff --git a/patches/ccp4/6.1.2/fix-baubles.patch b/patches/ccp4/6.1.2/fix-baubles.patch
new file mode 100644
index 000000000..2c5f659b8
--- /dev/null
+++ b/patches/ccp4/6.1.2/fix-baubles.patch
@@ -0,0 +1,22 @@
+--- ccp4i/etc/configure.def.dist 2009-01-09 16:45:08.000000000 +0100
++++ ccp4i/etc/configure.def.dist.new 2009-07-07 23:17:26.000000000 +0200
+@@ -53,8 +53,8 @@
+ RUN_IMOSFLM _text "ccp4iwish [file join [GetEnvPath CCP4I_TOP] imosflm imosflm.tcl] project [GetCurrentProjectDir [GetCurrentProject]]"
+ RUN_CCP4MG _text "ccp4mg"
+ RUN_COOT _text "coot"
+-RUN_BAUBLES _text "python [file join [GetEnvPath CCP4] share smartie baubles.py]"
+-RUN_DBVIEWER _text "wish [file join [GetEnvPath CCP4] share dbccp4i application viewer.tcl]"
++RUN_BAUBLES _text "python [file join [GetEnvPath CCP4] share ccp4 smartie baubles.py]"
++RUN_DBVIEWER _text "wish [file join [GetEnvPath DBCCP4I_TOP] application viewer.tcl]"
+ ENABLE_BUBBLE_HELP _logical 1
+ DISABLE_TASKS _logical 1
+ CCP4_SETUP_COMMAND _text setup_ccp4
+@@ -62,7 +62,7 @@
+ BLT_LIBRARY _text ""
+ MENU_LENGTH _positiveint 25
+ HYPERTEXT_VIEWER _text firefox
+-START_NETSCAPE _text netscape
++START_NETSCAPE _text firefox
+ O_MAPMAN _text mapman
+ MAPMAN_MAXSIZE _positiveint 4194304
+ QUANTA_MBKALL _text mbkall
diff --git a/patches/ccp4/6.1.2/rename-rapper.patch b/patches/ccp4/6.1.2/rename-rapper.patch
new file mode 100644
index 000000000..a50ae6dbd
--- /dev/null
+++ b/patches/ccp4/6.1.2/rename-rapper.patch
@@ -0,0 +1,12 @@
+--- ccp4i/scripts/rapper.script 2009-02-03 11:49:50.000000000 +0100
++++ ccp4i/scripts/rapper.script.new 2009-03-12 23:34:47.000000000 +0100
+@@ -17,7 +17,7 @@
+
+ #set up command line
+
+-set cmd "[BinPath rapper]"
++set cmd "[BinPath rappermc]"
+
+ set rapperdatadir [FileJoin [GetEnvPath CCP4] share rapper]
+ set paramsfile [FileJoin [GetEnvPath CCP4] share rapper params.xml]
+
diff --git a/patches/ccp4/6.1.2/rename-superpose.patch b/patches/ccp4/6.1.2/rename-superpose.patch
new file mode 100644
index 000000000..90480eb8e
--- /dev/null
+++ b/patches/ccp4/6.1.2/rename-superpose.patch
@@ -0,0 +1,12 @@
+diff -arNu ccp4-6.1.1/ccp4i/scripts/superpose.script ccp4-6.1.1.new/ccp4i/scripts/superpose.script
+--- ccp4-6.1.1/ccp4i/scripts/superpose.script 2006-07-26 16:22:49.000000000 +0200
++++ ccp4-6.1.1.new/ccp4i/scripts/superpose.script 2009-07-05 22:11:59.000000000 +0200
+@@ -21,7 +21,7 @@
+
+ if { [regexp SSM $SUPERPOSE_MODE ] } {
+
+- set cmd "[BinPath superpose] \"$XYZIN2\" -s $SSM_MOVING \"$XYZIN1\" -s $SSM_FIXED \"$XYZOUT_LOCAL\""
++ set cmd "[BinPath superpose-ccp4] \"$XYZIN2\" -s $SSM_MOVING \"$XYZIN1\" -s $SSM_FIXED \"$XYZOUT_LOCAL\""
+ set status [Execute $cmd "" program_status report ]
+
+ } elseif { [regexp TOP $SUPERPOSE_MODE ] } {
diff --git a/patches/ccp4/6.1.2/rename-truncate.patch b/patches/ccp4/6.1.2/rename-truncate.patch
new file mode 100644
index 000000000..26f1cda3e
--- /dev/null
+++ b/patches/ccp4/6.1.2/rename-truncate.patch
@@ -0,0 +1,22 @@
+--- ./ccp4i/templates/truncate.com.orig 2009-03-02 23:31:04.000000000 -0800
++++ ./ccp4i/templates/truncate.com 2009-03-02 23:31:08.000000000 -0800
+@@ -11,7 +11,7 @@
+ $SYMMETRY symmetry $SPACE_GROUP
+ $CELL cell $CELL_1 $CELL_2 $CELL_3 $CELL_4 $CELL_5 $CELL_6
+
+-1 truncate
++1 ftruncate
+ - { [StringSame $APPLY_TRUNCATE "WILSON" ] } YES | NO
+ {[IfSet $ANOMALOUS]} anomalous
+ - $ANOMALOUS YES | NO
+--- ./ccp4i/scripts/truncate.script.orig 2009-03-02 23:39:04.000000000 -0800
++++ ./ccp4i/scripts/truncate.script 2009-03-02 23:39:41.000000000 -0800
+@@ -45,7 +45,7 @@
+
+ CreateComScript truncate truncate_script
+
+- set cmd "[BinPath truncate] HKLIN \"$HKLIN\""
++ set cmd "[BinPath ftruncate] HKLIN \"$HKLIN\""
+ if { ![StringSame $INPUT_DATA AMPLITUDES] } {
+ append cmd " HKLOUT \"$HKL_TRUNCATE\""
+ }