diff options
Diffstat (limited to 'sci-biology/OBO-Edit/OBO-Edit-2.3.1.ebuild')
-rw-r--r-- | sci-biology/OBO-Edit/OBO-Edit-2.3.1.ebuild | 73 |
1 files changed, 0 insertions, 73 deletions
diff --git a/sci-biology/OBO-Edit/OBO-Edit-2.3.1.ebuild b/sci-biology/OBO-Edit/OBO-Edit-2.3.1.ebuild deleted file mode 100644 index 3af0ec3b3..000000000 --- a/sci-biology/OBO-Edit/OBO-Edit-2.3.1.ebuild +++ /dev/null @@ -1,73 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit toolchain-funcs java-pkg-2 - -MY_PV="${PV//./_}" - -DESCRIPTION="Java-based editor optimized for the OBO biological ontology file format" -HOMEPAGE="http://www.oboedit.org/" # no https, invalid certificate -SRC_URI="https://downloads.sourceforge.net/project/geneontology/OBO-Edit%202%20%5BLatest%20versions%5D/OBO-Edit%20${PV}/oboedit_${MY_PV}_unix_install4j.sh -> ${PN}_unix_install4j-${PV}.sh" - -LICENSE="OBO-Edit" # Artistic-like -SLOT="0" -KEYWORDS="" - -DEPEND="app-arch/rpm2targz" -RDEPEND="virtual/jre" - -S="${WORKDIR}" - -pkg_setup() { - einfo "Fixing java access violations ..." - # learned from bug #387227 - # opened a bug #402507 to get this .systemPrefs directory pre-created for everybody - addpredict /opt/icedtea-bin-7.2.0/jre/.systemPrefs - addpredict /usr/local/bin/OBO-Edit -} - -src_prepare(){ - default - dodir /opt/OBO-Edit2/.install4j /usr/bin - cp "${DISTDIR}"/"${PN}"_unix_install4j-"${PV}".sh "${WORKDIR}" || die - - # /var/tmp/portage/sci-biology/OBO-Edit-2.1.1.6/image//opt/OBO-Edit2/.install4j/response.varfile - sed -e "s#\"\${D}\"#"${D}"#g" "${FILESDIR}"/response.varfile | \ - sed -e "s#\"\${HOME}\"#"${HOME}"#g" | \ - sed -e "s@sys.symlinkDir=/usr/local/bin@#sys.symlinkDir=/usr/local/bin@" \ - > "${D}"/opt/OBO-Edit2/.install4j/response.varfile || die "sed failed" - cp -r "${D}"/opt/OBO-Edit2/.install4j "${HOME}" || die - - # for user root install4j writes into /opt/icedtea-bin-7.2.0/jre/.systemPrefs or whatever it - # found via JAVA_HOME or similar variables - # for other users it writes into $HOME/.java/.userPrefs/ - - # trick setting -Djava.util.prefs.systemRoot="${TMPDIR}" does not work - sed \ - -e "s@/bin/java\" -Dinstall4j.jvmDir=\"\$app_java_home\"@/bin/java\" -Duser.home="${HOME}" -Dinstall4j.jvmDir="${HOME}" -Dsys.symlinkDir="${D}"/usr/bin -Djava.util.prefs.systemRoot="${HOME}"@" \ - -i "${WORKDIR}"/"${PN}"_unix_install4j-"${PV}".sh \ - || die "failed to set userHome and jvmDir where JAVA .systemPrefs can be found" - - chmod u+rx "${WORKDIR}/${PN}"_unix_install4j-"${PV}".sh || die -} - -src_install(){ - # it looks install4j removes the target installation direcotry before writing into it :(( - # - # cat "${TMPDIR}"/.install4j/response.varfile - # chmod a-w "${TMPDIR}"/.install4j/response.varfile - - INSTALL4J_KEEP_TEMP="yes" \ - sh "${WORKDIR}"/"${PN}"_unix_install4j-"${PV}".sh -q \ - --varfile="${HOME}"/.install4j/response.varfile \ - --destination="${D}"/opt/OBO-Edit2 \ - -dir "${D}"/opt/OBO-Edit2 \ - || die "Failed to run the self-extracting ${WORKDIR}/${PN}_unix_install4j-${PV}.sh file" - - find . -name firstrun -delete || die - - echo "PATH=/opt/OBO-Edit2" > 99OBO-Edit || die - doenvd 99OBO-Edit -} |