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Diffstat (limited to 'sci-biology/allpathslg/allpathslg-52415.ebuild')
| -rw-r--r-- | sci-biology/allpathslg/allpathslg-52415.ebuild | 40 |
1 files changed, 0 insertions, 40 deletions
diff --git a/sci-biology/allpathslg/allpathslg-52415.ebuild b/sci-biology/allpathslg/allpathslg-52415.ebuild deleted file mode 100644 index ff7bdcaf2..000000000 --- a/sci-biology/allpathslg/allpathslg-52415.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-42337.ebuild,v 1.6 2013/11/13 02:34:46 patrick Exp $ - -EAPI=4 - -inherit autotools flag-o-matic - -DESCRIPTION="De novo assembly of whole-genome shotgun microreads" -# see also http://www.broadinstitute.org/software/allpaths-lg/blog/?page_id=12 -HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd" -SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz" - -LICENSE="MIT" -SLOT="0" -IUSE="" -KEYWORDS="~amd64" - -# as of release 44849, GCC 4.7.0 (or higher) is required -# seems pre gcc-4.7 users must stay with: -# ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/2013/2013-01/allpathslg-44837.tar.gz -DEPEND=" - >=sys-devel/gcc-4.7 - dev-libs/boost - !sci-biology/allpaths - sci-biology/vaal" -RDEPEND="" - -src_prepare() { - sed -i 's/-ggdb3//' configure.ac || die - eautoreconf -} - -src_install() { - einstall || die - # Provided by sci-biology/vaal - for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do - rm "${D}/usr/bin/$i" || die - done -} |