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Diffstat (limited to 'sci-biology/bowtie/files/bowtie-1.2.2-unbundle-seqan.patch')
-rw-r--r--sci-biology/bowtie/files/bowtie-1.2.2-unbundle-seqan.patch14
1 files changed, 0 insertions, 14 deletions
diff --git a/sci-biology/bowtie/files/bowtie-1.2.2-unbundle-seqan.patch b/sci-biology/bowtie/files/bowtie-1.2.2-unbundle-seqan.patch
deleted file mode 100644
index b1a5f98f5..000000000
--- a/sci-biology/bowtie/files/bowtie-1.2.2-unbundle-seqan.patch
+++ /dev/null
@@ -1,14 +0,0 @@
---- bowtie-1.2.2/Makefile 2019-02-18 13:26:29.490835084 +0100
-+++ bowtie-1.2.2/Makefile 2019-02-18 13:28:36.864742545 +0100
-@@ -5,10 +5,7 @@
- prefix = /usr/local
- bindir = $(prefix)/bin
-
--SEQAN_DIR = ./SeqAn-1.1
--# treat SeqAn as a sysdir to suppress warnings
--SEQAN_INC = -isystem $(SEQAN_DIR)
--INC = $(if $(RELEASE_BUILD),-I$(CURDIR)/.include) $(SEQAN_INC) -I third_party
-+INC = $(if $(RELEASE_BUILD),-I$(CURDIR)/.include) `pkg-config --cflags seqan-1.4` -I third_party
- CPP = g++
- CXX = $(CPP)
- CC = gcc