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Diffstat (limited to 'sci-biology/bwa/bwa-0.7.13.ebuild')
-rw-r--r-- | sci-biology/bwa/bwa-0.7.13.ebuild | 36 |
1 files changed, 0 insertions, 36 deletions
diff --git a/sci-biology/bwa/bwa-0.7.13.ebuild b/sci-biology/bwa/bwa-0.7.13.ebuild deleted file mode 100644 index 27f314b7b..000000000 --- a/sci-biology/bwa/bwa-0.7.13.ebuild +++ /dev/null @@ -1,36 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -inherit eutils toolchain-funcs - -DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner" -HOMEPAGE="http://bio-bwa.sourceforge.net/" -SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2" - -LICENSE="GPL-3" -# bwa-0.7.13 has "Apache2" branch with Apache2-licensed BWA with ropebwt2 index -# feature which is slower than "bwtsw" algorithm but it has a permissive license. -SLOT="0" -IUSE="" -KEYWORDS="~amd64 ~x86 ~x64-macos" - -PATCHES=( "${FILESDIR}"/${P}-Makefile.patch ) - -src_prepare() { - epatch ${PATCHES[@]} - tc-export CC AR -} - -src_install() { - dobin bwa - - doman bwa.1 - - exeinto /usr/libexec/${PN} - doexe qualfa2fq.pl xa2multi.pl - - dodoc NEWS.md README-alt.md README.md -} |