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Diffstat (limited to 'sci-biology/gbrowse/gbrowse-2.00.ebuild')
-rw-r--r-- | sci-biology/gbrowse/gbrowse-2.00.ebuild | 76 |
1 files changed, 0 insertions, 76 deletions
diff --git a/sci-biology/gbrowse/gbrowse-2.00.ebuild b/sci-biology/gbrowse/gbrowse-2.00.ebuild deleted file mode 100644 index cce42a39b..000000000 --- a/sci-biology/gbrowse/gbrowse-2.00.ebuild +++ /dev/null @@ -1,76 +0,0 @@ -# Copyright 1999-2009 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/generic-genome-browser/generic-genome-browser-1.58.ebuild,v 1.9 2007/07/29 17:07:38 phreak Exp $ - -EAPI="2" - -inherit perl-module webapp - -MY_P="GBrowse-${PV}" - -DESCRIPTION="The generic genome browser provides a display of genomic annotations on interactive web pages" -HOMEPAGE="http://gmod.org" -SRC_URI="mirror://sourceforge/gmod/${MY_P}.tar.gz" - -LICENSE="Artistic" -# webapp ebuilds do not set SLOT -KEYWORDS="~x86 ~amd64" -IUSE="-minimal" # lwp moby scf - -S="${WORKDIR}/${MY_P}" - -# TODO: dev-perl/MOBY, dev-perl/Bio-SCF, dev-perl/Safe-World (not compatible w/perl-5.10) -DEPEND=">=dev-lang/perl-5.8.8 - >=sci-biology/bioperl-1.6 - >=dev-perl/GD-2.07 - dev-perl/IO-String - virtual/perl-Digest-MD5 - >=dev-perl/CGI-Session-4.03 - dev-perl/Statistics-Descriptive - >=dev-perl/Bio-Graphics-1.97 - dev-perl/JSON - dev-perl/libwww-perl" -RDEPEND="${DEPEND} - >=www-servers/apache-2.0.47 - dev-perl/DBI - || ( dev-perl/DBD-Pg dev-perl/DBD-mysql ) - !minimal? ( - dev-perl/File-NFSLock - dev-perl/FCGI - perl-core/Math-BigInt - dev-perl/Digest-SHA1 - dev-perl/Crypt-SSLeay - dev-perl/Net-SMTP-SSL - dev-perl/GD-SVG - dev-perl/Net-OpenID-Consumer - virtual/perl-DB_File - dev-perl/DB_File-Lock - )" - -src_prepare() { - sed -i 's/return unless -t STDIN/return/' install_util/GBrowseInstall.pm || die -} - -src_configure() { - webapp_src_preinst - perl Makefile.PL \ - HTDOCS="${D}/${MY_HTDOCSDIR}" \ - CGIBIN="${D}/${MY_HTDOCSDIR}/cgi-bin" \ - CONF="${D}/etc" \ - PREFIX="${D}/usr" \ - PACKAGE_DIR="${D}" \ - INSTALLDIRS=vendor \ - GBROWSE_ROOT=gbrowse \ - DESTDIR="${ROOT}" \ - || die -} - -src_install() { - mydoc="Changes README TODO INSTALL" - perl-module_src_install - - # TODO: write our own readme - webapp_postinst_txt en "${S}/INSTALL" - webapp_src_install -# find "${D}" -type f | xargs sed -i "s|${D}||" || die -} |