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Diffstat (limited to 'sci-biology/nilearn/nilearn-0.4.2.ebuild')
-rw-r--r--sci-biology/nilearn/nilearn-0.4.2.ebuild51
1 files changed, 51 insertions, 0 deletions
diff --git a/sci-biology/nilearn/nilearn-0.4.2.ebuild b/sci-biology/nilearn/nilearn-0.4.2.ebuild
new file mode 100644
index 000000000..87226eec3
--- /dev/null
+++ b/sci-biology/nilearn/nilearn-0.4.2.ebuild
@@ -0,0 +1,51 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+inherit distutils-r1
+
+DESCRIPTION="Fast and easy statistical learning on NeuroImaging data"
+HOMEPAGE="http://nilearn.github.io/"
+SRC_URI="https://github.com/nilearn/nilearn/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="+plot test"
+
+DEPEND="
+ test? (
+ ${RDEPEND}
+ dev-python/nose[${PYTHON_USEDEP}]
+ )
+ dev-python/setuptools[${PYTHON_USEDEP}]
+ "
+RDEPEND="
+ dev-python/joblib[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ sci-libs/scikits_learn[${PYTHON_USEDEP}]
+ sci-libs/scipy[${PYTHON_USEDEP}]
+ sci-libs/nibabel[${PYTHON_USEDEP}]
+ plot? ( dev-python/matplotlib[${PYTHON_USEDEP}] )"
+
+# upstream is reluctant to *not* depend on bundled scikits_learn:
+# https://github.com/nilearn/nilearn/pull/1398
+python_prepare_all() {
+ local f
+ for f in nilearn/{*/*/,*/,}*.py; do
+ sed -r \
+ -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \
+ -e 's/from (sklearn|\.|)\.externals import/import/' \
+ -i $f || die
+ done
+
+ distutils-r1_python_prepare_all
+}
+
+python_test() {
+ echo "backend: Agg" > matplotlibrc
+ MPLCONFIGDIR=. nosetests -v || die
+}