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Diffstat (limited to 'sci-biology/perga/perga-9999.ebuild')
-rw-r--r-- | sci-biology/perga/perga-9999.ebuild | 36 |
1 files changed, 36 insertions, 0 deletions
diff --git a/sci-biology/perga/perga-9999.ebuild b/sci-biology/perga/perga-9999.ebuild new file mode 100644 index 000000000..4f79d7210 --- /dev/null +++ b/sci-biology/perga/perga-9999.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit git-r3 eutils toolchain-funcs + +DESCRIPTION="Paired End Reads Guided Assembler" +HOMEPAGE="https://github.com/hitbio/PERGA + http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4252104" +EGIT_REPO_URI="https://github.com/hitbio/PERGA.git" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_prepare(){ + sed -e "s/gcc -g /$(tc-getCC) ${CFLAGS} ${LDFLAGS} /" -i src/Makefile || die + sed -e 's/-Wl,-O1//' -i src/Makefile || die +} + +# does not compile with gcc-5.3.0 but 4.9.3 works +src_compile(){ + cd src || die + emake +} + +src_install(){ + dobin src/perga + dodoc README +} |