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Diffstat (limited to 'sci-biology/phusion2/phusion2-3.0.ebuild')
| -rw-r--r-- | sci-biology/phusion2/phusion2-3.0.ebuild | 37 |
1 files changed, 0 insertions, 37 deletions
diff --git a/sci-biology/phusion2/phusion2-3.0.ebuild b/sci-biology/phusion2/phusion2-3.0.ebuild deleted file mode 100644 index 2ea281d41..000000000 --- a/sci-biology/phusion2/phusion2-3.0.ebuild +++ /dev/null @@ -1,37 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -DESCRIPTION="Whole genome shotgun assembler using phrap (for Sanger-based reads)" -HOMEPAGE="https://sourceforge.net/projects/phusion2" -SRC_URI="https://downloads.sourceforge.net/project/${PN}/${P}.tar.gz" - -LICENSE="all-rights-reserved" # temporarily placed value -# from http://genome.cshlp.org/content/13/1/81.full -# Availability -# Phusion is undergoing a rewrite of the code to make this a portable package. It will be made available free of charge to academic sites, but requires licensing for commercial use. For more information please contact the authors. -SLOT="0" -KEYWORDS="~amd64" - -DEPEND="app-shells/tcsh - sys-cluster/openmpi" -RDEPEND="${DEPEND} - sci-biology/phrap - dev-lang/perl" - -# contains bundled ssaha -# file collision with sci-biology/shrimp on /usr/bin/fasta2fastq - -S="${WORKDIR}" - -src_prepare(){ - default - rm -f phusion2 *.o - sed -e 's/^CFLAGS =/# CFLAGS =/' -i Makefile || die -} - -src_install(){ - dobin ctgreads.pl phusion2 - dodoc how_to_make_mates -} |