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Diffstat (limited to 'sci-biology/salmon/salmon-1.4.0.ebuild')
-rw-r--r-- | sci-biology/salmon/salmon-1.4.0.ebuild | 38 |
1 files changed, 0 insertions, 38 deletions
diff --git a/sci-biology/salmon/salmon-1.4.0.ebuild b/sci-biology/salmon/salmon-1.4.0.ebuild deleted file mode 100644 index 420cb2ae2..000000000 --- a/sci-biology/salmon/salmon-1.4.0.ebuild +++ /dev/null @@ -1,38 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake - -DESCRIPTION="Transcript-level quantification from RNA-seq reads using lightweight alignments" -HOMEPAGE="https://github.com/COMBINE-lab/salmon" -SRC_URI="https://github.com/COMBINE-lab/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="GPL-3" -SLOT="0" -KEYWORDS="" - -RDEPEND=" - dev-libs/boost:=[threads(-)] - sys-libs/zlib -" - -DEPEND="${RDEPEND} - app-arch/bzip2 - app-arch/xz-utils - >=dev-libs/jemalloc-5.0.1 - >=dev-cpp/tbb-2018.20180312 - sci-biology/pufferfish - dev-libs/cereal -" - -BDEPEND=" - app-arch/unzip - net-misc/curl -" - -PATCHES=( - "${FILESDIR}/${P}-do-not-fetch-pufferfish.patch" - "${FILESDIR}/${P}-allow-newer-boost.patch" -) |