diff options
Diffstat (limited to 'sci-biology')
-rw-r--r-- | sci-biology/ncbi-tools++/ChangeLog | 6 | ||||
-rw-r--r-- | sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild | 7 |
2 files changed, 12 insertions, 1 deletions
diff --git a/sci-biology/ncbi-tools++/ChangeLog b/sci-biology/ncbi-tools++/ChangeLog index 7f9450200..3da37d966 100644 --- a/sci-biology/ncbi-tools++/ChangeLog +++ b/sci-biology/ncbi-tools++/ChangeLog @@ -3,6 +3,12 @@ # $Header: $ 14 Sep 2013; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> + ncbi-tools++-9.0.0-r1.ebuild: + Support at least when user passes USE="gnutls -ssl -openssl" but what we + really want is to prefer gnutls over openssl if both are available on the + system. + + 14 Sep 2013; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> ncbi-tools++-9.0.0-r1.ebuild, +files/ncbi-tools++-9.0.0-remove-LZO-definition-upstream.patch: Add upstream ncbi-tools++-9.0.0-remove-LZO-definition-upstream.patch with diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild index 1a34f3554..4e1ee2e3e 100644 --- a/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild +++ b/sci-biology/ncbi-tools++/ncbi-tools++-9.0.0-r1.ebuild @@ -24,7 +24,7 @@ IUSE=" debug static-libs static threads pch test wxwidgets odbc berkdb boost bzip2 cppunit curl expat fastcgi fltk freetype ftds gif - glut gnutls hdf5 icu jpeg mesa mysql muparser opengl pcre png python + glut gnutls hdf5 icu lzo jpeg mesa mysql muparser opengl pcre png python sablotron sqlite sqlite3 ssl tiff xerces xalan xml xpm xslt X" #KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" KEYWORDS="" @@ -64,6 +64,7 @@ DEPEND=" png? ( media-libs/libpng ) tiff? ( media-libs/tiff ) xpm? ( x11-libs/libXpm ) + dev-libs/lzo app-arch/bzip2 dev-libs/libpcre" # USE flags which should be added somehow: wxWindows wxWidgets SP ORBacus ODBC OEChem sge @@ -206,6 +207,9 @@ src_configure() { # --with-flat-makefile # --with-3psw=std:netopt favor standard (system) builds of the above pkgs + + +# TODO: should improve the ssl/openssl/gmutls logic like is in net-misc/vpnc $(use_with debug) $(use_with debug max-debug) $(use_with debug symbols) @@ -215,6 +219,7 @@ src_configure() { $(use_with prefix runpath "${EPREFIX}/usr/$(get_libdir)/ncbi_cxx") $(use_with test check) $(use_with pch) + $(use_with lzo lzo "${EPREFIX}/usr") $(use_with pcre pcre "${EPREFIX}/usr") $(use_with gnutls gnutls "${EPREFIX}/usr") $(use_with ssl openssl "${EPREFIX}/usr") |