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* Fix manifests regressionJonathan-Christofer Demay2014-07-1915-0/+50
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* Several DESTDIR fixesJonathan-Christofer Demay2014-07-1924-74/+27
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* sci-mathematics/apron: force j1 for makeJonathan-Christofer Demay2014-07-173-14/+5
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* fix make install/checkChristoph Junghans2014-07-143-15/+55
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* added support for libcerfChristoph Junghans2014-07-132-0/+4
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* initial commitChristoph Junghans2014-07-134-0/+49
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* version bumpChristoph Junghans2014-07-132-0/+6
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* Merge branch 'master' of github.com:gentoo-science/sciGuillaume Horel2014-07-123-2/+25
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| * version bumpAndrew Reisner2014-07-113-2/+25
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* | sci-mathematics/scilab fix access violation issueGuillaume Horel2014-07-122-16/+20
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* Merge remote-tracking branch 'github/master'Justin Lecher2014-07-100-0/+0
|\ | | | | | | | | | | * github/master: dev-util/nvidia-cuda-sdk: add version 6.5.11 dev-util/nvidia-cuda-toolkit: dev-util/nvidia-cuda-toolkit: add version 6.5.11
| * Merge pull request #240 from marbre/nvidia-cuda-sdkJustin2014-07-104-0/+174
| |\ | | | | | | dev-util/nvidia-cuda-sdk: add version 6.5.11
| | * dev-util/nvidia-cuda-sdk: add version 6.5.11Marius Brehler2014-07-104-0/+174
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| * Merge pull request #239 from marbre/nvidia-cuda-toolkitJustin2014-07-105-0/+205
| |\ | | | | | | dev-util/nvidia-cuda-toolkit: add version 6.5.11
| | * dev-util/nvidia-cuda-toolkit: dev-util/nvidia-cuda-toolkit: add version 6.5.11Marius Brehler2014-07-105-0/+205
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* | dev-util/nvidia-cuda-sdk: add version 6.5.11Marius Brehler2014-07-104-0/+174
| | | | | | | | Package-Manager: portage-2.2.8-r1
* | dev-util/nvidia-cuda-toolkit: dev-util/nvidia-cuda-toolkit: add version 6.5.11Marius Brehler2014-07-105-0/+205
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* | Added forgotten patch file 7.6.3-libabinit_options.patch for sci-physics/abinitHonza Macháček2014-07-102-0/+85
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* sync with gx86, fix FEATURES=testChristoph Junghans2014-07-073-15/+21
| | | | Package-Manager: portage-2.2.8-r1
* InCvsJustin Lecher2014-07-075-157/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Merge remote-tracking branch 'github/master'Justin Lecher2014-07-0711-1/+326
|\ | | | | | | | | | | | | | | | | * github/master: dev-python/bokeh: dev-python/bokeh: New version with python3 support for bug #516052 dev-python/bokeh: dev-python/bokeh: Copy latest ebuild from portage Add subslot dependency on clhep, we need to rebuild for each clhep subslot change. New live ebuild for VGM, adapting to fixes for cmake install paths in upstream (no need to manually install in ebuild anymore). Released VGM-4.00 does not have these fixes yet, I am discussing with upstream whether they can also provide some tarballs of released versions (as sourceforge svn-snapshotting is unusable for us) and delay packaging of VGM-4.00 until then. New live ebuild, using cmake-buildsystem (upstream switches to cmake for next release), add flags for g4root and mtroot. Adapt to upstream's fixes concerning install paths, we don't need to do manually installation anymore. I will skip geant-vmc-3.00b01 from packaging, it does not include those fixes yet.
| * Merge pull request #236 from olifre/masterJustin2014-07-076-1/+169
| |\ | | | | | | New live ebuild for VGM and Geant-VMC
| | * Add subslot dependency on clhep, we need to rebuild for each clhep subslot ↵Oliver Freyermuth2014-07-062-1/+5
| | | | | | | | | | | | change.
| | * New live ebuild for VGM, adapting to fixes for cmake install paths in ↵Oliver Freyermuth2014-07-062-0/+74
| | | | | | | | | | | | | | | | | | upstream (no need to manually install in ebuild anymore). Released VGM-4.00 does not have these fixes yet, I am discussing with upstream whether they can also provide some tarballs of released versions (as sourceforge svn-snapshotting is unusable for us) and delay packaging of VGM-4.00 until then.
| | * New live ebuild, using cmake-buildsystem (upstream switches to cmake for ↵Oliver Freyermuth2014-07-063-0/+90
| | | | | | | | | | | | | | | | | | next release), add flags for g4root and mtroot. Adapt to upstream's fixes concerning install paths, we don't need to do manually installation anymore. I will skip geant-vmc-3.00b01 from packaging, it does not include those fixes yet.
| * | Merge pull request #237 from aufau/bokehJustin2014-07-075-0/+157
| |\ \ | | |/ | |/| dev-python/bokeh (in the main tree): Fix bug #516052
| | * dev-python/bokeh: dev-python/bokeh: New version with python3 support for bug ↵Witold Pilat2014-07-075-11/+94
| | | | | | | | | | | | | | | | | | #516052 Package-Manager: portage-2.2.10
| | * dev-python/bokeh: dev-python/bokeh: Copy latest ebuild from portageWitold Pilat2014-07-074-0/+74
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* | sci-chemistry/nmrpipe: Fix emul-linux deps for modern multilibJustin Lecher2014-07-072-2/+5
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* | app-doc/root-docs: backport fixes from ROOT-6 branchAndrew Savchenko2014-07-064-0/+190
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* | sci-physics/root: Backport fixes from ROOT-6 branchAndrew Savchenko2014-07-068-0/+702
| | | | | | | | | | Backport fixes for .credits, .demos, .license from ROOT-6 branch. A patch was backported by upstream too.
* | sci-physics/root: rectify license listAndrew Savchenko2014-07-064-3/+7
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* | root and root-docs: version bumpAndrew Savchenko2014-07-068-1/+486
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* | sci-biology/MaSuRCA: add dependency on sci-biology/quorumMartin Mokrejš2014-07-041-1/+2
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* | sci-biology/clview: add dependency on =x11-libs/fox-1.6*Martin Mokrejš2014-07-043-3/+9
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* | sci-biology/caftools: clarified package descriptionMartin Mokrejš2014-07-042-3/+6
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* | sci-biology/emboss-6.3.1_p4-r2: added a patch for 'undefined reference to ↵Martin Mokrejš2014-07-043-0/+20
| | | | | | | | | | | | c_plwid' bug #493724 Package-Manager: portage-2.2.7
* | sci-biology/Atlas-Link: noted dependence, see bug #516366Martin Mokrejš2014-07-044-0/+46
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* | sci-biology/gap2caf: remove -rpath-link from src/MakefileMartin Mokrejš2014-07-042-2/+6
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* Nnot available anymoreJustin Lecher2014-07-044-64/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/hydronmr: Fix emul-linux deps for modern multilibJustin Lecher2014-07-042-3/+3
| | | | Package-Manager: portage-2.2.10
* sci-chemistry/nmrpipe: Fix emul-linux deps for modern multilibJustin Lecher2014-07-042-6/+14
| | | | | Package-Manager: portage-2.2.10 RepoMan-Options: --force
* sci-chemistry/unio: Fix emul-linux deps for modern multilibJustin Lecher2014-07-042-3/+6
| | | | | Package-Manager: portage-2.2.10 RepoMan-Options: --force
* sci-libs/fftw: Drop reference to app-emulation/emul-linux-x86-soundlibsJustin Lecher2014-07-042-4/+4
| | | | Package-Manager: portage-2.2.10
* More prefix fixes, add missing depSébastien Fabbro2014-07-032-9/+11
| | | | Package-Manager: portage-2.2.10.1-prefix
* Merge branch 'master' of git://git.overlays.gentoo.org/proj/sciSébastien Fabbro2014-07-0324-130/+339
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| * sci-physcis/root-9999: patch moved to upstreamAndrew Savchenko2014-07-032-2/+4
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| * sci-chemistry/cpmgfit: New package written by meJustin Lecher2014-07-034-0/+65
| | | | | | | | | | Package-Manager: portage-2.2.10 RepoMan-Options: --force
| * Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciMartin Mokrejš2014-07-032-0/+4
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| | * use ninjaChristoph Junghans2014-07-022-0/+4
| | | | | | | | | | | | Package-Manager: portage-2.2.8-r1