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* app-doc/root-docs: backport fixes from portageAndrew Savchenko2012-07-015-17/+22
| | | | And remove redundant dep in 5.32.03.
* more comments, .RhistorySebastien Fabbro2012-06-292-1/+1
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* sci-mathematics/rstudio: initial importSebastien Fabbro2012-06-299-0/+323
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* dev-libs/mathjax: Initial importSebastien Fabbro2012-06-294-0/+78
| | | | (Portage version: 2.2.01.20430-prefix/git/Linux x86_64, unsigned Manifest commit)
* dev-python/bitarray: New package requested by jamasi on ircJustin Lecher2012-06-294-0/+46
| | | | (Portage version: 2.2.0_alpha114/git/Linux x86_64, unsigned Manifest commit)
* dev-cpp/eigen: version bumpSebastien Fabbro2012-06-284-112/+31
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* keyword amd64-linux and x86-linuxSébastien Fabbro2012-06-293-3/+6
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* add pthread for as-neededSébastien Fabbro2012-06-291-0/+3
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* fix license and add flag descSébastien Fabbro2012-06-292-1/+4
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* initial importSébastien Fabbro2012-06-294-0/+66
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* [dev-python/pyhdf] whitespaceKacper Kowalik (Xarthisius)2012-06-281-1/+1
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* [dev-python/pyhdf] initial import wrt #423953. Ebuild written by Paweł ↵Kacper Kowalik (Xarthisius)2012-06-283-0/+57
| | | | Rumian <gorkypl@gmail.com> with my modifications
* updated to petsc-3.3_p1Jens-Malte Gottfried2012-06-285-4/+4
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* sci-libs/openblas: fixed sonameSebastien Fabbro2012-06-272-3/+7
| | | | (Portage version: 2.2.01.20430-prefix/git/Linux x86_64, unsigned Manifest commit)
* sci-libs/atlas: version bumpSebastien Fabbro2012-06-261-1/+1
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* sci-libs/atlas: version bumpSebastien Fabbro2012-06-262-0/+6
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* sci-libs/openblas: remove test flagSebastien Fabbro2012-06-261-1/+1
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* sci-libs/openblas: version bumpSebastien Fabbro2012-06-266-53/+65
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* Merge github.com:gentoo-science/sciSébastien Fabbro2012-06-254-7/+10
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| * Merge branch 'master' of ssh://git.overlays.gentoo.org/proj/sci into overlayDongxu Li2012-06-250-0/+0
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| * | [sci-libs/libxc] add ~amd64-linuxAlexey Shvetsov2012-06-258-10/+17
| | | | | | | | | | | | (Portage version: 2.2.0_alpha110/git/Linux x86_64, unsigned Manifest commit)
* | | sci-libs/magma: Initial importSébastien Fabbro2012-06-256-0/+1439
| |/ |/| | | | | (Portage version: 2.1.10.65/git/Linux x86_64, unsigned Manifest commit)
* | [sci-libs/libxc] add ~amd64-linuxAlexey Shvetsov2012-06-234-3/+7
|/ | | | (Portage version: 2.2.0_alpha110/git/Linux x86_64, unsigned Manifest commit)
* [sci-libs/bigdft] add ~amd64-linuxAlexey Shvetsov2012-06-233-8/+12
| | | | (Portage version: 2.2.0_alpha110/git/Linux x86_64, RepoMan options: --force, unsigned Manifest commit)
* [sci-libs/wannier90] add ~amd64-linuxAlexey Shvetsov2012-06-233-4/+7
| | | | (Portage version: 2.2.0_alpha110/git/Linux x86_64, unsigned Manifest commit)
* [sci-libs/fox] make it prefix awareAlexey Shvetsov2012-06-233-9/+12
| | | | (Portage version: 2.2.0_alpha110/git/Linux x86_64, unsigned Manifest commit)
* Merge pull request #8 from nicolasbock/masterAlexey Shvetsov2012-06-224-0/+58
|\ | | | | Added modules to science overlay
| * Added libX11 dependency.Nicolas Bock2012-06-222-0/+4
| | | | | | | | (Portage version: 2.1.10.49/git/Linux x86_64, unsigned Manifest commit)
| * Fixed package description.Nicolas Bock2012-06-213-2/+5
| | | | | | | | (Portage version: 2.1.10.49/git/Linux x86_64, unsigned Manifest commit)
| * First commit for modules package.Nicolas Bock2012-06-214-0/+51
| | | | | | | | (Portage version: 2.1.10.49/git/Linux x86_64, unsigned Manifest commit)
* | [dev-java/joda-convert] add missing dependency on junit:4Kacper Kowalik (Xarthisius)2012-06-222-1/+2
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* | Merge branch 'master' of https://github.com/wking/science into wking-hdfviewKacper Kowalik (Xarthisius)2012-06-221-3/+4
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| * | dev-java/hdf-java-2.8: fix hdfview script (quotes and sh-bang)W. Trevor King2012-06-221-1/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add a sh-bang to the beginning of the script, because the user may not be using a POSIX shell. Remove redundant, escaped quotes around the java.library.path command substitution. With the quotes, the process uses a garbled Java path, and you see errors like: java.lang.UnsatisfiedLinkError: no jhdf5 in java.library.path
| * | dev-java/hdf-java-2.8: explicitly build packages for hdfviewW. Trevor King2012-06-221-1/+1
| | | | | | | | | | | | | | | Otherwise the *obj.jar files under lib/ are not created, and we need to install those for hdfview.
| * | dev-java/hdf-java: fix HOMEPAGE in v2.8 ebuild.W. Trevor King2012-06-211-1/+1
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* | app-doc/root-docs: backport htmldoc generation fixesAndrew Savchenko2012-06-205-28/+152
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* | sci-physics/root: backport htmldoc fixes to 5.32 branchAndrew Savchenko2012-06-203-21/+13
| | | | | | | | | | | | This fixes bootstrap and some downgrade conditions, where no valid root is available for documentation build. Revbump is required to maintain dependecy consistency.
* | sci-physics/root: remove redundant virtualxAndrew Savchenko2012-06-203-4/+4
| | | | | | | | Xvfb-related stuff is now in the app-doc/root-docs.
* | sci-physics/root: reuse htmldoc patchAndrew Savchenko2012-06-205-58/+5
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* | app-doc/root-docs: version bump for 5.34.00Andrew Savchenko2012-06-203-1/+105
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* | sci-physics/root: version bump for 5.34.00Andrew Savchenko2012-06-203-1/+386
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* | app-doc/root-docs: separate htmldoc from root packageAndrew Savchenko2012-06-204-1/+165
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* | sci-physics/root: fix repoman warnings and update manifestAndrew Savchenko2012-06-202-6/+6
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* | sci-physics/root: separate htmldoc packageAndrew Savchenko2012-06-204-68/+12
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* | Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciAndrew Savchenko2012-06-1931-632/+199
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| * | Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciHonza Macháček2012-06-194-15/+32
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| | * [sci-chemistry/gromacs] Add new acceleration use flags for gromacsAlexey Shvetsov2012-06-194-15/+32
| | | | | | | | | | | | (Portage version: 2.2.0_alpha110/git/Linux x86_64, unsigned Manifest commit)
| * | Reflect the split of the fortran interface out of sci-libs/netcdf in ↵Honza Macháček2012-06-1911-334/+34
| | | | | | | | | | | | sci-libs/bigdft and sci-libs/etsf_io. The version of sci-physics/elk bumped to 1.4.22, the old ones removed.
| * | Reflect the split of the fortran interface out of sci-libs/netcdf in ↵Honza Macháček2012-06-193-4/+12
| |/ | | | | | | sci-physics/abinit-6.12.3-r2
| * Merge github.com:gentoo-science/sciSébastien Fabbro2012-06-189-4/+113
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