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* | | sci-libs/bigdft-abi-1.0.4-r2.ebuild modified from -r1 to avoid sandbox ↵Honza Macháček2013-09-192-0/+6
| | | | | | | | | | | | violation when generating TeX fonts. Metadata file added, solution to other repoman complaints postponed.
* | | sci-libs/wannier90-1.2-r2.ebuild modified from -r1 to avoid sandbox ↵Honza Macháček2013-09-192-1/+10
| | | | | | | | | | | | | | | | | | violation when generating TeX fonts. Package-Manager: portage-2.2.1
* | | sci-libs/bigdft removed. Superseded by sci-physics/bigdft and ↵Honza Macháček2013-09-1914-907/+0
| | | | | | | | | | | | sci-libs/bigdft-abi
* | | sci-physics/abinit updated to 7.4.2, the new way of testing adopted. Use of ↵Honza Macháček2013-09-196-154/+208
| | | | | | | | | | | | | | | | | | atompaw, bigdft, libxc, and wannier90 made optional, driven by USE flags (atompaw, bigdft, libxc, wannier). USE flag levmar for the new optional Levenberg-Marquardt least-squares algorithm support added. Ebuild cleaned up a bit. Package-Manager: portage-2.2.1
* | | sci-physics/openm updated to 3.7.6, corrected linking with fortran code ↵Honza Macháček2013-09-193-3/+17
|/ / | | | | | | | | | | using gcc. Package-Manager: portage-2.2.1
* | Bump to 1.33 and solve issue #113François Bissey2013-09-196-49/+191
| | | | | | | | Package-Manager: portage-2.2.6
* | bump modglue to 1.19François Bissey2013-09-195-20/+29
| | | | | | | | Package-Manager: portage-2.2.6
* | sci-chemistry/freeon-1.0.2: Version bumpNicolas Bock2013-09-183-0/+32
|/ | | | Package-Manager: portage-2.2.1
* sci-chemistry/freeon-1.0.1: Version bump.Nicolas Bock2013-09-183-0/+32
| | | | Package-Manager: portage-2.2.1
* sci-physics/lammps-20130917: Version bump.Nicolas Bock2013-09-183-0/+121
| | | | Package-Manager: portage-2.2.1
* Merge pull request #114 from jauhien/masterJustin2013-09-181-1/+1
|\ | | | | sci-mathematics/cdfplayer: add ~amd64 keyword
| * sci-mathematics/cdfplayer: add ~amd64 keywordJauhien Piatlicki2013-09-181-1/+1
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* Merge branch 'master' of ssh://github.com/gentoo-science/sciChristoph Junghans2013-09-171-1/+1
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| * Merge pull request #112 from poletti-marco/masterJustin2013-09-171-1/+1
| |\ | | | | | | Update root-9999.ebuild
| | * Update root-9999.ebuildpoletti-marco2013-09-171-1/+1
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* / moved to gx86Christoph Junghans2013-09-173-188/+4
|/ | | | Package-Manager: portage-2.2.1
* Merge branch 'master' of github.com:gentoo-science/sciNicolas Bock2013-09-173-11/+29
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| * Merge github.com:gentoo-science/sciSébastien Fabbro2013-09-173-64/+0
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| * | sci-libs/scikits_image: Fix source directory, update dependencies, cleanup ↵Sébastien Fabbro2013-09-173-11/+29
| | | | | | | | | | | | | | | | | | | | | (bug #484428) Package-Manager: portage-2.2.4.22351-prefix RepoMan-Options: --force
| * | Merge branch 'master' of git://git.overlays.gentoo.org/proj/sciSébastien Fabbro2013-09-172-4/+7
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| * \ \ Merge branch 'master' of git://git.overlays.gentoo.org/proj/sci; ↵Sébastien Fabbro2013-09-163-0/+61
| |\ \ \ | | | | | | | | | | | | | | | github.com:gentoo-science/sci
* | | | | sci-chemistry/freeon-1.0 Updated manifest for tar file.Nicolas Bock2013-09-171-1/+1
| | | | | | | | | | | | | | | | | | | | Package-Manager: portage-2.2.1
* | | | | sci-chemistry/freeon: Added package masks to get an upgrade to version 1.0.Nicolas Bock2013-09-171-0/+8
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* | | | | sci-chemistry/freeon-1.0 Version bump.Nicolas Bock2013-09-174-21/+42
| |_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The versioning scheme changed from a date based version to a more common versioning scheme. Portage considers the latest release, 1.0, to be a downgrade. I masked the older versions to every so gently suggest an upgrade. The live version's URI is fixed now, the code moved from savannah to github, and it is slotted to "live" so that both live and release versions can be installed simulataneously. Package-Manager: portage-2.2.1
* | | | InCVsJustin Lecher2013-09-173-64/+0
| |_|/ |/| | | | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* | | Merge pull request #111 from mgorny/python-fixesKacper Kowalik2013-09-175-9/+145
|\ \ \ | |_|/ |/| | python-r1 fixes
| * | dev-python/healpy: Clean up python_test(). Bug #484426.Michał Górny2013-09-172-4/+7
| |/ | | | | | | Package-Manager: portage-2.2.6
| * Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciMartin Mokrejš2013-09-164-8/+48
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| * | Mask the 6.6.0 version due to build breakage; add the missing plcol patch ↵Martin Mokrejš2013-09-163-5/+138
| | | | | | | | | | | | copied over from 6.3.1
* | | Merge pull request #109 from tamiko/numdiffSébastien Fabbro2013-09-163-0/+61
|\ \ \ | |_|/ |/| | An ebuild for numdiff (http://www.nongnu.org/numdiff/)
| * | Add missing "|| die" and improve mv statementsMatthias Maier2013-09-171-4/+2
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| * | An ebuild for numdiff [1]Matthias Maier2013-09-163-0/+63
|/ / | | | | | | | | | | | | This commit provides an ebuild for the numdiff utility, which is yet another diff-tool for comparic files ignoring small numerical differences [1] http://www.nongnu.org/numdiff/
* | sci-chemistry/freeon-2013.09.16: Removed dependency on sys-libs/zlib. ThisNicolas Bock2013-09-162-1/+4
| | | | | | | | | | | | dependency should come in through hdf5. Package-Manager: portage-2.2.1
* | sci-chemistry/freeon-2013.09.16: Version bump.Nicolas Bock2013-09-163-0/+38
| | | | | | | | Package-Manager: portage-2.2.1
* | Merge pull request #108 from ustcscgy/patch-1Sébastien Fabbro2013-09-151-8/+7
|\ \ | |/ |/| fix ball-9999.ebuild upstream git uri and qt dependencies
| * fix ball-9999.ebuild upstream git uri and qt dependenciesustcscgy2013-09-151-8/+7
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* | sci-chemistry/freeon-2013.09.12: Updated md5 checksum on tar dist.Nicolas Bock2013-09-151-1/+1
| | | | | | | | Package-Manager: portage-2.2.1
* | sci-chemistry/freeon-2013.09.12 Changed versioning of package to avoid maskNicolas Bock2013-09-153-3/+12
|/ | | | | | collision with the live package. Package-Manager: portage-2.2.1
* Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciKacper Kowalik (Xarthisius)2013-09-1592-533/+6050
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| * sci-chemistry/freeon-20130912: Added new version.Nicolas Bock2013-09-143-0/+44
| | | | | | | | Package-Manager: portage-2.2.1
| * added STFC licenseChristoph Junghans2013-09-141-0/+67
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| * Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sciNicolas Bock2013-09-1414-4/+2581
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| | * Support at least when user passes USE='gnutls -ssl -openssl' but what we ↵Martin Mokrejš2013-09-142-1/+12
| | | | | | | | | | | | really want is to prefer gnutls over openssl if both are available on the system.
| | * Add upstream ncbi-tools++-9.0.0-remove-LZO-definition-upstream.patch with ↵Martin Mokrejš2013-09-143-4/+20
| | | | | | | | | | | | line offset changes.
| | * Fix URL to point to a public SVN repositoryMartin Mokrejš2013-09-145-2/+35
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| | * more 12.0.0 cleanup, still not workingMartin Mokrejš2013-09-145-7/+50
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| | * add ↵Martin Mokrejš2013-09-133-2/+28
| | | | | | | | | | | | ncbi-tools++-9.0.0-fix-undef-reference-to-GenBankReaders_Register_Id1.patch; get around a bug in the C++ Toolkit's handling of --without-runpath with certain linker versions by running configure with -Wl,-rpath-link,_build/lib in LDFLAGS (assuming _build is an absolute path; otherwise, prepend /home/mmokrejs/proj/sci/sci-biology/ncbi-tools++/) [from Aaron Ucko].
| | * fix version number in the ebuildMartin Mokrejš2013-09-131-1/+1
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| | * Remove redundant connect from DLL_LIB lines.Martin Mokrejš2013-09-131-0/+1
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| | * Remove redundant connect from DLL_LIB lines.Martin Mokrejš2013-09-131-0/+16
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