aboutsummaryrefslogtreecommitdiff
Commit message (Collapse)AuthorAgeFilesLines
* sci-biology/bwa: version bumpMartin Mokrejš2017-07-311-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | Release 0.7.16 (30 July 2017) ----------------------------- This release added a couple of minor features and incorporated multiple pull requests, including: * Added option -5, which is useful to some Hi-C pipelines. * Fixed an error with samtools sorting (#129). Updated download link for GRCh38 (#123). Fixed README MarkDown formatting (#70). Addressed multiple issues via a collected pull request #139 by @jmarshall. Avoid malformatted SAM header when -R is used with TAB (#84). Output mate CIGAR (#138). This release is expected to give the same alignment as 0.7.15, except the added mate-cigar tag. (0.7.16: 30 July 2017, r1180) https://lists.sourceforge.net/lists/listinfo/bio-bwa-help Package-Manager: Portage-2.3.6, Repoman-2.3.3
* sci-biology/bwa: move to main treeDavid Seifert2016-05-081-1/+0
|
* sci-biology/bwa: version bump; added a note about a brach of bwa-0.7.13 ↵Martin Mokrejš2016-02-281-0/+1
| | | | | | which has alternative Apache2 license Package-Manager: portage-2.2.26
* IMport to CVSJustin Lecher2015-03-031-1/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Updated bwa to 0.7.12 and modernized the build system. Removed hard-coded ar.Ted Tanberry2015-02-051-0/+1