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Package-Manager: Portage-2.3.31, Repoman-2.3.9
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many thanks to @kiwifb and @maplesond for on fixing the package and ebuild
ax_check_zlib is in use. A hint for zlib location has to be provided
otherwise system zlib will be used on prefix.
make sure zlib is a dependency. develop branch has switched to proper
library detection.
fixing rpath. enabling python support (but broken right now).
make sure a suitable python3 is setup at configure time
bump to 2.4.2
fix typo in /DEPPEND/DEPEND/, cleanup comments
Closes: https://github.com/gentoo/sci/issues/867
Closes: https://github.com/gentoo/sci/pull/868
Package-Manager: Portage-2.3.31, Repoman-2.3.9
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Try call setup.py on our own so that it could receive ${DESTDIR}
contents. This still does not work.
The ebuild drops bundled boost copy but retains bundled seqan
headers and the modified copy of jellyfish. They won't interfere
with with site-wide installed packages of those tools in Gentoo.
The modified jellyfish is linked-in statically and binaries have
'kat_' prefix.
The kat-2.4.1.ebuild and -9999.ebuild should later get same logic
like appears in -8888.ebuild. Currently they stick to upstream's
approach of using bundled boost too.
All ebuilds suffer same problem: the python files do not get installed
at all.
Package-Manager: Portage-2.3.28, Repoman-2.3.9
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Introduce -8888 ebuild which zaps bundled stuff altogether and uses
system-wide boost and jellyfish2 files.
Package-Manager: Portage-2.3.28, Repoman-2.3.9
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Martin Mokrejs
François Bissey
GitWeb